Protein–RNA interactions for Protein: Q9ES00

Ube4b, Ubiquitin conjugation factor E4 B, mousemouse

Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube4bQ9ES00 4930588G17Rik-201ENSMUST00000208075 1474 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Ube4bQ9ES00 Cuzd1-201ENSMUST00000046611 2256 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Ube4bQ9ES00 Rsrc1-201ENSMUST00000046542 3062 ntAPPRIS ALT2 TSL 1 (best) BASIC10.1□□□□□ -0.79
Ube4bQ9ES00 2310043P16Rik-201ENSMUST00000205403 3881 ntBASIC10.1□□□□□ -0.79
Ube4bQ9ES00 Adamts13-202ENSMUST00000102891 4506 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Ube4bQ9ES00 Prdm1-204ENSMUST00000218369 2517 ntAPPRIS ALT2 TSL 5 BASIC10.1□□□□□ -0.79
Ube4bQ9ES00 Gm28624-201ENSMUST00000186430 2131 ntBASIC10.1□□□□□ -0.79
Ube4bQ9ES00 Usp4-209ENSMUST00000194959 3436 ntAPPRIS ALT1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Ube4bQ9ES00 Gm20658-202ENSMUST00000177059 1950 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Ube4bQ9ES00 Ddo-201ENSMUST00000019977 3000 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Ube4bQ9ES00 Mc3r-201ENSMUST00000038532 2623 ntAPPRIS P1 BASIC10.1□□□□□ -0.79
Ube4bQ9ES00 Olfr464-205ENSMUST00000217112 2232 ntAPPRIS P1 TSL 5 BASIC10.1□□□□□ -0.79
Ube4bQ9ES00 Pofut1-207ENSMUST00000152390 4833 ntTSL 2 BASIC10.1□□□□□ -0.79
Ube4bQ9ES00 Fgf6-201ENSMUST00000000187 4657 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Ube4bQ9ES00 Rbm19-201ENSMUST00000031590 4010 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Ube4bQ9ES00 Phf21a-205ENSMUST00000111291 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC10.1□□□□□ -0.79
Ube4bQ9ES00 Pygm-202ENSMUST00000113483 2583 ntTSL 5 BASIC10.1□□□□□ -0.79
Ube4bQ9ES00 Gm42638-201ENSMUST00000196065 2587 ntBASIC10.1□□□□□ -0.79
Ube4bQ9ES00 Sept6-202ENSMUST00000060474 3457 ntAPPRIS P3 TSL 1 (best) BASIC10.1□□□□□ -0.79
Ube4bQ9ES00 Serpinb9c-201ENSMUST00000021837 1902 ntAPPRIS ALT2 TSL 1 (best) BASIC10.1□□□□□ -0.79
Ube4bQ9ES00 Ralgps1-201ENSMUST00000042615 6029 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Ube4bQ9ES00 Gm26805-201ENSMUST00000181885 3089 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Ube4bQ9ES00 Gm37909-201ENSMUST00000193157 2159 ntBASIC10.1□□□□□ -0.79
Ube4bQ9ES00 Ifitm10-203ENSMUST00000105988 824 ntAPPRIS P4 TSL 2 BASIC10.1□□□□□ -0.79
Ube4bQ9ES00 Folr1-201ENSMUST00000106981 960 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Ube4bQ9ES00 0610010K14Rik-206ENSMUST00000108576 576 ntAPPRIS ALT1 TSL 2 BASIC10.1□□□□□ -0.79
Ube4bQ9ES00 Gm15808-201ENSMUST00000119046 604 ntBASIC10.1□□□□□ -0.79
Ube4bQ9ES00 Tspan2-202ENSMUST00000119902 961 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Ube4bQ9ES00 Gm10714-201ENSMUST00000131346 874 ntTSL 2 BASIC10.1□□□□□ -0.79
Ube4bQ9ES00 Gm13165-201ENSMUST00000152923 383 ntTSL 5 BASIC10.1□□□□□ -0.79
Ube4bQ9ES00 Smlr1-201ENSMUST00000179685 669 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Ube4bQ9ES00 Gm28032-201ENSMUST00000184104 96 ntBASIC10.1□□□□□ -0.79
Ube4bQ9ES00 Gm42800-201ENSMUST00000202494 733 ntTSL 5 BASIC10.1□□□□□ -0.79
Ube4bQ9ES00 Gm44551-201ENSMUST00000208804 171 ntBASIC10.1□□□□□ -0.79
Ube4bQ9ES00 AC159376.1-201ENSMUST00000218504 630 ntBASIC10.1□□□□□ -0.79
Ube4bQ9ES00 CT030182.1-201ENSMUST00000225935 533 ntBASIC10.1□□□□□ -0.79
Ube4bQ9ES00 Olfr889-201ENSMUST00000072290 945 ntTSL 5 BASIC10.1□□□□□ -0.79
Ube4bQ9ES00 Apol9a-202ENSMUST00000089452 1527 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Ube4bQ9ES00 Ptrh2-202ENSMUST00000108022 3038 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Ube4bQ9ES00 Sipa1l1-210ENSMUST00000222714 6002 ntAPPRIS P3 TSL 1 (best) BASIC10.1□□□□□ -0.79
Ube4bQ9ES00 Bco2-201ENSMUST00000119103 2118 ntAPPRIS P1 TSL 5 BASIC10.1□□□□□ -0.79
Ube4bQ9ES00 Lonp2-203ENSMUST00000122188 2372 ntTSL 2 BASIC10.1□□□□□ -0.79
Ube4bQ9ES00 Celf2-224ENSMUST00000182879 2223 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Ube4bQ9ES00 Trip12-207ENSMUST00000186648 6442 ntAPPRIS ALT2 TSL 5 BASIC10.1□□□□□ -0.79
Ube4bQ9ES00 Bcas3-205ENSMUST00000108061 3810 ntAPPRIS ALT2 TSL 5 BASIC10.1□□□□□ -0.79
Ube4bQ9ES00 AC158777.1-201ENSMUST00000226216 1724 ntBASIC10.1□□□□□ -0.79
Ube4bQ9ES00 Edil3-201ENSMUST00000043111 5156 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Ube4bQ9ES00 Tsc2-203ENSMUST00000226284 6266 ntAPPRIS ALT2 BASIC10.1□□□□□ -0.79
Ube4bQ9ES00 Adam6a-201ENSMUST00000053086 2558 ntAPPRIS P1 BASIC10.1□□□□□ -0.79
Ube4bQ9ES00 Mir9-3hg-202ENSMUST00000181511 3412 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Ube4bQ9ES00 Tnfrsf8-201ENSMUST00000030339 3414 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Ube4bQ9ES00 Gm37052-201ENSMUST00000194929 1831 ntBASIC10.1□□□□□ -0.79
Ube4bQ9ES00 Gm9979-201ENSMUST00000069457 3005 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Ube4bQ9ES00 Gm5592-201ENSMUST00000097044 3033 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Ube4bQ9ES00 Krtap10-10-201ENSMUST00000218843 1306 ntAPPRIS P1 BASIC10.09□□□□□ -0.79
Ube4bQ9ES00 Uvssa-201ENSMUST00000087864 7326 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Ube4bQ9ES00 Txndc9-208ENSMUST00000195247 1699 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Ube4bQ9ES00 Ankmy1-202ENSMUST00000160548 3246 ntAPPRIS ALT2 TSL 2 BASIC10.09□□□□□ -0.79
Ube4bQ9ES00 Rab13-202ENSMUST00000107373 1415 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Ube4bQ9ES00 Gm5171-201ENSMUST00000214944 1415 ntBASIC10.09□□□□□ -0.79
Ube4bQ9ES00 Gpatch1-201ENSMUST00000079693 3065 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Ube4bQ9ES00 Traf1-207ENSMUST00000172159 3436 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Ube4bQ9ES00 Bbs7-201ENSMUST00000040148 2599 ntAPPRIS ALT1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Ube4bQ9ES00 Loxl3-202ENSMUST00000101257 3252 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Ube4bQ9ES00 Sncaip-201ENSMUST00000025413 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC10.09□□□□□ -0.79
Ube4bQ9ES00 Rnf121-201ENSMUST00000089052 2344 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Ube4bQ9ES00 Trgv2-201ENSMUST00000103563 491 ntAPPRIS P1 BASIC10.09□□□□□ -0.79
Ube4bQ9ES00 Tnnt3-206ENSMUST00000105944 753 ntAPPRIS ALT2 TSL 1 (best) BASIC10.09□□□□□ -0.79
Ube4bQ9ES00 Tnnt3-210ENSMUST00000105948 753 ntAPPRIS ALT2 TSL 1 (best) BASIC10.09□□□□□ -0.79
Ube4bQ9ES00 Tnnt3-212ENSMUST00000105950 1037 ntAPPRIS ALT2 TSL 5 BASIC10.09□□□□□ -0.79
Ube4bQ9ES00 Gm13916-201ENSMUST00000117368 628 ntBASIC10.09□□□□□ -0.79
Ube4bQ9ES00 Gm16066-201ENSMUST00000118575 1086 ntTSL 3 BASIC10.09□□□□□ -0.79
Ube4bQ9ES00 Rab15-202ENSMUST00000118604 778 ntTSL 3 BASIC10.09□□□□□ -0.79
Ube4bQ9ES00 Gm16481-201ENSMUST00000119074 1227 ntBASIC10.09□□□□□ -0.79
Ube4bQ9ES00 Pdlim2-204ENSMUST00000127836 920 ntTSL 5 BASIC10.09□□□□□ -0.79
Ube4bQ9ES00 Gm829-202ENSMUST00000146622 722 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Ube4bQ9ES00 4930557F10Rik-201ENSMUST00000155432 630 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Ube4bQ9ES00 Gm14249-201ENSMUST00000156239 1017 ntTSL 5 BASIC10.09□□□□□ -0.79
Ube4bQ9ES00 Erh-202ENSMUST00000166931 506 ntTSL 2 BASIC10.09□□□□□ -0.79
Ube4bQ9ES00 Tnnt3-224ENSMUST00000169299 1013 ntAPPRIS ALT2 TSL 5 BASIC10.09□□□□□ -0.79
Ube4bQ9ES00 4930562C15Rik-202ENSMUST00000171105 1299 ntTSL 2 BASIC10.09□□□□□ -0.79
Ube4bQ9ES00 Ly6g6c-201ENSMUST00000173207 598 ntAPPRIS ALT2 TSL 3 BASIC10.09□□□□□ -0.79
Ube4bQ9ES00 Ly6g6c-202ENSMUST00000173478 962 ntAPPRIS P2 TSL 1 (best) BASIC10.09□□□□□ -0.79
Ube4bQ9ES00 Tnnt3-226ENSMUST00000180152 1067 ntAPPRIS ALT2 TSL 5 BASIC10.09□□□□□ -0.79
Ube4bQ9ES00 Gm4812-201ENSMUST00000182847 993 ntBASIC10.09□□□□□ -0.79
Ube4bQ9ES00 Cyb561-206ENSMUST00000184086 1130 ntTSL 5 BASIC10.09□□□□□ -0.79
Ube4bQ9ES00 Gm43050-202ENSMUST00000201152 651 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Ube4bQ9ES00 Gm9176-201ENSMUST00000219955 1120 ntBASIC10.09□□□□□ -0.79
Ube4bQ9ES00 Gm12216-207ENSMUST00000220191 1073 ntAPPRIS P5 TSL 5 BASIC10.09□□□□□ -0.79
Ube4bQ9ES00 Gm10308-201ENSMUST00000095183 742 ntAPPRIS P1 TSL 2 BASIC10.09□□□□□ -0.79
Ube4bQ9ES00 Npy1r-202ENSMUST00000212588 2770 ntAPPRIS P1 TSL 5 BASIC10.09□□□□□ -0.79
Ube4bQ9ES00 Tnfsf18-201ENSMUST00000086084 2066 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Ube4bQ9ES00 AC157476.2-201ENSMUST00000217574 3200 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Ube4bQ9ES00 Ankrd53-201ENSMUST00000014891 1739 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Ube4bQ9ES00 Apon-202ENSMUST00000218722 1747 ntAPPRIS P1 BASIC10.09□□□□□ -0.79
Ube4bQ9ES00 AC131081.1-201ENSMUST00000219535 1736 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Ube4bQ9ES00 Gpm6b-201ENSMUST00000060210 2858 ntAPPRIS P3 TSL 1 (best) BASIC10.09□□□□□ -0.79
Ube4bQ9ES00 Ctnnd1-211ENSMUST00000111685 5985 ntTSL 5 BASIC10.09□□□□□ -0.79
Ube4bQ9ES00 Ctnnd1-215ENSMUST00000111689 5961 ntTSL 5 BASIC10.09□□□□□ -0.79
Ube4bQ9ES00 Gm36638-202ENSMUST00000192073 2169 ntBASIC10.09□□□□□ -0.79
Retrieved 100 of 76,532 protein–RNA pairs in 84.1 ms