Protein–RNA interactions for Protein: Q9DB34

Chmp2a, Charged multivesicular body protein 2a, mousemouse

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2aQ9DB34 Gm44155-201ENSMUST00000203923 412 ntBASIC11.06□□□□□ -0.64
Chmp2aQ9DB34 Lsm3-205ENSMUST00000206947 618 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Chmp2aQ9DB34 2310039L15Rik-203ENSMUST00000220058 727 ntTSL 5 BASIC11.06□□□□□ -0.64
Chmp2aQ9DB34 Gm7959-201ENSMUST00000221823 1078 ntBASIC11.06□□□□□ -0.64
Chmp2aQ9DB34 Olfr225-201ENSMUST00000055276 1260 ntAPPRIS ALT2 BASIC11.06□□□□□ -0.64
Chmp2aQ9DB34 Taar5-201ENSMUST00000092659 1014 ntAPPRIS P1 BASIC11.06□□□□□ -0.64
Chmp2aQ9DB34 Brat1-202ENSMUST00000100505 3431 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Chmp2aQ9DB34 Gm26658-201ENSMUST00000181067 2500 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Chmp2aQ9DB34 Sept9-202ENSMUST00000093907 3616 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Chmp2aQ9DB34 Ccdc130-202ENSMUST00000098578 2119 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
Chmp2aQ9DB34 4930579F01Rik-201ENSMUST00000012186 1732 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Chmp2aQ9DB34 Per1-202ENSMUST00000101004 3507 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Chmp2aQ9DB34 Dchs2-201ENSMUST00000191829 10783 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
Chmp2aQ9DB34 Ptbp1-202ENSMUST00000095457 2598 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Chmp2aQ9DB34 Atp13a4-201ENSMUST00000039090 2878 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Chmp2aQ9DB34 Oscp1-203ENSMUST00000143712 1473 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Chmp2aQ9DB34 Ppp1r32-201ENSMUST00000038842 1458 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Chmp2aQ9DB34 Dkk2-201ENSMUST00000029665 3705 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Chmp2aQ9DB34 Mms19-201ENSMUST00000026168 3162 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
Chmp2aQ9DB34 Diaph1-201ENSMUST00000025337 5596 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
Chmp2aQ9DB34 Cckar-202ENSMUST00000200691 3230 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Chmp2aQ9DB34 Ciapin1-209ENSMUST00000162538 4359 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Chmp2aQ9DB34 Smap1-202ENSMUST00000129254 1365 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Chmp2aQ9DB34 Cd247-205ENSMUST00000161559 1816 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Chmp2aQ9DB34 Gpat4-201ENSMUST00000167004 5518 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Chmp2aQ9DB34 Mkks-202ENSMUST00000110089 3178 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Chmp2aQ9DB34 Cdadc1-208ENSMUST00000225839 3189 ntAPPRIS ALT2 BASIC11.05□□□□□ -0.64
Chmp2aQ9DB34 Gm24791-201ENSMUST00000104284 131 ntBASIC11.05□□□□□ -0.64
Chmp2aQ9DB34 Trpm2-201ENSMUST00000105399 731 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Chmp2aQ9DB34 Gm3409-202ENSMUST00000110599 1154 ntAPPRIS P2 TSL 5 BASIC11.05□□□□□ -0.64
Chmp2aQ9DB34 Camk2a-204ENSMUST00000115295 979 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Chmp2aQ9DB34 Gm14234-201ENSMUST00000119539 845 ntBASIC11.05□□□□□ -0.64
Chmp2aQ9DB34 Gm12688-201ENSMUST00000136525 701 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Chmp2aQ9DB34 Gm22146-201ENSMUST00000157397 288 ntBASIC11.05□□□□□ -0.64
Chmp2aQ9DB34 Gm23218-201ENSMUST00000158124 276 ntBASIC11.05□□□□□ -0.64
Chmp2aQ9DB34 Rn7s6-201ENSMUST00000175005 291 ntBASIC11.05□□□□□ -0.64
Chmp2aQ9DB34 Gm23647-201ENSMUST00000175042 109 ntBASIC11.05□□□□□ -0.64
Chmp2aQ9DB34 Rn5s-201ENSMUST00000177555 119 ntBASIC11.05□□□□□ -0.64
Chmp2aQ9DB34 n-R5s108-201ENSMUST00000177575 119 ntBASIC11.05□□□□□ -0.64
Chmp2aQ9DB34 n-R5s121-201ENSMUST00000177589 119 ntBASIC11.05□□□□□ -0.64
Chmp2aQ9DB34 n-R5s146-201ENSMUST00000177889 119 ntBASIC11.05□□□□□ -0.64
Chmp2aQ9DB34 Gm22109-201ENSMUST00000177995 119 ntBASIC11.05□□□□□ -0.64
Chmp2aQ9DB34 Gm22291-201ENSMUST00000178027 119 ntBASIC11.05□□□□□ -0.64
Chmp2aQ9DB34 n-R5s141-201ENSMUST00000178066 119 ntBASIC11.05□□□□□ -0.64
Chmp2aQ9DB34 Gm23284-201ENSMUST00000178069 119 ntBASIC11.05□□□□□ -0.64
Chmp2aQ9DB34 n-R5s100-201ENSMUST00000178106 119 ntBASIC11.05□□□□□ -0.64
Chmp2aQ9DB34 n-R5s111-201ENSMUST00000178203 119 ntBASIC11.05□□□□□ -0.64
Chmp2aQ9DB34 n-R5s105-201ENSMUST00000178499 119 ntBASIC11.05□□□□□ -0.64
Chmp2aQ9DB34 n-R5s149-201ENSMUST00000178520 119 ntBASIC11.05□□□□□ -0.64
Chmp2aQ9DB34 n-R5s103-201ENSMUST00000178755 119 ntBASIC11.05□□□□□ -0.64
Chmp2aQ9DB34 n-R5s123-201ENSMUST00000178804 119 ntBASIC11.05□□□□□ -0.64
Chmp2aQ9DB34 n-R5s142-201ENSMUST00000178820 119 ntBASIC11.05□□□□□ -0.64
Chmp2aQ9DB34 n-R5s144-201ENSMUST00000178859 119 ntBASIC11.05□□□□□ -0.64
Chmp2aQ9DB34 n-R5s139-201ENSMUST00000178975 119 ntBASIC11.05□□□□□ -0.64
Chmp2aQ9DB34 n-R5s134-201ENSMUST00000178983 119 ntBASIC11.05□□□□□ -0.64
Chmp2aQ9DB34 n-R5s136-201ENSMUST00000179080 119 ntBASIC11.05□□□□□ -0.64
Chmp2aQ9DB34 Gm25018-201ENSMUST00000179081 119 ntBASIC11.05□□□□□ -0.64
Chmp2aQ9DB34 n-R5s104-201ENSMUST00000179107 119 ntBASIC11.05□□□□□ -0.64
Chmp2aQ9DB34 n-R5s113-201ENSMUST00000179143 119 ntBASIC11.05□□□□□ -0.64
Chmp2aQ9DB34 Gm3415-202ENSMUST00000179214 1154 ntAPPRIS P2 TSL 5 BASIC11.05□□□□□ -0.64
Chmp2aQ9DB34 n-R5s133-201ENSMUST00000179275 119 ntBASIC11.05□□□□□ -0.64
Chmp2aQ9DB34 n-R5s117-201ENSMUST00000179431 119 ntBASIC11.05□□□□□ -0.64
Chmp2aQ9DB34 Gm25212-201ENSMUST00000179432 119 ntBASIC11.05□□□□□ -0.64
Chmp2aQ9DB34 n-R5s138-201ENSMUST00000179476 119 ntBASIC11.05□□□□□ -0.64
Chmp2aQ9DB34 n-R5s122-201ENSMUST00000179500 119 ntBASIC11.05□□□□□ -0.64
Chmp2aQ9DB34 n-R5s143-201ENSMUST00000179542 119 ntBASIC11.05□□□□□ -0.64
Chmp2aQ9DB34 n-R5s107-201ENSMUST00000179704 119 ntBASIC11.05□□□□□ -0.64
Chmp2aQ9DB34 Gm26391-201ENSMUST00000179843 119 ntBASIC11.05□□□□□ -0.64
Chmp2aQ9DB34 n-R5s110-201ENSMUST00000179995 119 ntBASIC11.05□□□□□ -0.64
Chmp2aQ9DB34 n-R5s128-201ENSMUST00000180096 119 ntBASIC11.05□□□□□ -0.64
Chmp2aQ9DB34 n-R5s124-201ENSMUST00000180334 119 ntBASIC11.05□□□□□ -0.64
Chmp2aQ9DB34 4933417D19Rik-201ENSMUST00000181432 1229 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Chmp2aQ9DB34 P4htm-204ENSMUST00000193621 1297 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Chmp2aQ9DB34 A830092H15Rik-202ENSMUST00000195446 649 ntTSL 3 BASIC11.05□□□□□ -0.64
Chmp2aQ9DB34 D3Ertd751e-215ENSMUST00000195882 680 ntAPPRIS P3 TSL 2 BASIC11.05□□□□□ -0.64
Chmp2aQ9DB34 Gm42430-201ENSMUST00000197209 616 ntBASIC11.05□□□□□ -0.64
Chmp2aQ9DB34 1700017M07Rik-201ENSMUST00000198307 940 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Chmp2aQ9DB34 Gm3409-203ENSMUST00000199142 1167 ntAPPRIS ALT2 TSL 5 BASIC11.05□□□□□ -0.64
Chmp2aQ9DB34 Gm3402-203ENSMUST00000200228 1154 ntAPPRIS P2 TSL 5 BASIC11.05□□□□□ -0.64
Chmp2aQ9DB34 Gm18706-201ENSMUST00000210053 1066 ntBASIC11.05□□□□□ -0.64
Chmp2aQ9DB34 Gm35713-201ENSMUST00000210516 199 ntBASIC11.05□□□□□ -0.64
Chmp2aQ9DB34 1700012D14Rik-204ENSMUST00000210788 547 ntTSL 3 BASIC11.05□□□□□ -0.64
Chmp2aQ9DB34 Btg4-203ENSMUST00000213680 1282 ntAPPRIS P2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Chmp2aQ9DB34 Gm31557-201ENSMUST00000213825 973 ntTSL 5 BASIC11.05□□□□□ -0.64
Chmp2aQ9DB34 Gm31557-202ENSMUST00000213995 722 ntTSL 5 BASIC11.05□□□□□ -0.64
Chmp2aQ9DB34 AC116680.1-201ENSMUST00000222804 613 ntTSL 3 BASIC11.05□□□□□ -0.64
Chmp2aQ9DB34 AC154361.2-201ENSMUST00000224747 943 ntBASIC11.05□□□□□ -0.64
Chmp2aQ9DB34 Enox1-203ENSMUST00000227662 3064 ntAPPRIS ALT2 BASIC11.05□□□□□ -0.64
Chmp2aQ9DB34 Ctrl-201ENSMUST00000034368 879 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Chmp2aQ9DB34 Asna1-201ENSMUST00000064314 1256 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Chmp2aQ9DB34 Gm24089-201ENSMUST00000093696 109 ntBASIC11.05□□□□□ -0.64
Chmp2aQ9DB34 Rcbtb2-223ENSMUST00000170677 3573 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Chmp2aQ9DB34 Impa1-202ENSMUST00000118410 2988 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Chmp2aQ9DB34 Ahnak2-201ENSMUST00000101010 2821 ntAPPRIS ALT2 BASIC11.05□□□□□ -0.64
Chmp2aQ9DB34 Sord-201ENSMUST00000110551 2352 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Chmp2aQ9DB34 BC043934-202ENSMUST00000185694 2356 ntBASIC11.05□□□□□ -0.64
Chmp2aQ9DB34 Lrfn5-202ENSMUST00000119481 3615 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Chmp2aQ9DB34 Slc10a7-202ENSMUST00000209490 3485 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Chmp2aQ9DB34 Tdrd1-202ENSMUST00000111604 5187 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Chmp2aQ9DB34 Ncmap-203ENSMUST00000105858 1616 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 56.9 ms