Protein–RNA interactions for Protein: Q8CE13

Ccdc17, Coiled-coil domain-containing protein 17, mousemouse

Predictions only

Length 565 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc17Q8CE13 Dmtf1-201ENSMUST00000071921 3806 ntAPPRIS P2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Ccdc17Q8CE13 Ugt1a7c-201ENSMUST00000058237 3231 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
Ccdc17Q8CE13 Fopnl-202ENSMUST00000120707 1414 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
Ccdc17Q8CE13 Slc1a2-201ENSMUST00000005220 2127 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Ccdc17Q8CE13 Bicd2-202ENSMUST00000110084 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Ccdc17Q8CE13 9530082P21Rik-203ENSMUST00000181605 3162 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Ccdc17Q8CE13 Serpinb6a-203ENSMUST00000076532 1504 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
Ccdc17Q8CE13 Zfp14-201ENSMUST00000077787 1506 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Ccdc17Q8CE13 Kcnk5-201ENSMUST00000024011 3392 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Ccdc17Q8CE13 Ackr2-202ENSMUST00000214340 3015 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Ccdc17Q8CE13 Nmnat1-203ENSMUST00000119921 2657 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Ccdc17Q8CE13 Snx29-201ENSMUST00000096273 1622 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Ccdc17Q8CE13 Fam120b-201ENSMUST00000055352 4518 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Ccdc17Q8CE13 Gm24933-201ENSMUST00000103762 110 ntBASIC11.11□□□□□ -0.63
Ccdc17Q8CE13 Gm23252-201ENSMUST00000103776 110 ntBASIC11.11□□□□□ -0.63
Ccdc17Q8CE13 Gm23132-201ENSMUST00000104254 132 ntBASIC11.11□□□□□ -0.63
Ccdc17Q8CE13 Nup188-202ENSMUST00000113634 534 ntTSL 2 BASIC11.11□□□□□ -0.63
Ccdc17Q8CE13 2610203C22Rik-201ENSMUST00000115480 1246 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Ccdc17Q8CE13 Gm12736-201ENSMUST00000119330 236 ntBASIC11.11□□□□□ -0.63
Ccdc17Q8CE13 Gm6441-201ENSMUST00000120983 696 ntBASIC11.11□□□□□ -0.63
Ccdc17Q8CE13 Gm16441-201ENSMUST00000138176 924 ntBASIC11.11□□□□□ -0.63
Ccdc17Q8CE13 Gm6038-201ENSMUST00000154310 948 ntBASIC11.11□□□□□ -0.63
Ccdc17Q8CE13 Malat1-205ENSMUST00000174808 656 ntTSL 2 BASIC11.11□□□□□ -0.63
Ccdc17Q8CE13 Tcl1-203ENSMUST00000175652 535 ntTSL 2 BASIC11.11□□□□□ -0.63
Ccdc17Q8CE13 Gm26443-201ENSMUST00000179610 110 ntBASIC11.11□□□□□ -0.63
Ccdc17Q8CE13 1810026B05Rik-208ENSMUST00000190028 590 ntTSL 3 BASIC11.11□□□□□ -0.63
Ccdc17Q8CE13 Myo1h-206ENSMUST00000196467 1208 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Ccdc17Q8CE13 Gm6352-201ENSMUST00000203583 1134 ntBASIC11.11□□□□□ -0.63
Ccdc17Q8CE13 Olfr1358-201ENSMUST00000204477 1064 ntAPPRIS P1 BASIC11.11□□□□□ -0.63
Ccdc17Q8CE13 Gm33080-201ENSMUST00000205429 172 ntBASIC11.11□□□□□ -0.63
Ccdc17Q8CE13 4933430L12Rik-201ENSMUST00000206788 1194 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Ccdc17Q8CE13 Gm32786-201ENSMUST00000211351 628 ntTSL 3 BASIC11.11□□□□□ -0.63
Ccdc17Q8CE13 AC129217.1-201ENSMUST00000225181 642 ntBASIC11.11□□□□□ -0.63
Ccdc17Q8CE13 AC102523.1-201ENSMUST00000228706 1144 ntBASIC11.11□□□□□ -0.63
Ccdc17Q8CE13 H2-Aa-201ENSMUST00000040655 1132 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Ccdc17Q8CE13 Gm5278-201ENSMUST00000055957 552 ntBASIC11.11□□□□□ -0.63
Ccdc17Q8CE13 Tspan8-202ENSMUST00000080630 1156 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Ccdc17Q8CE13 Vill-202ENSMUST00000074734 2440 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Ccdc17Q8CE13 C130083M11Rik-201ENSMUST00000197171 2072 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Ccdc17Q8CE13 Poc5-201ENSMUST00000099295 5183 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Ccdc17Q8CE13 Gsg1-203ENSMUST00000111910 1384 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
Ccdc17Q8CE13 Tgoln1-201ENSMUST00000070524 5013 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Ccdc17Q8CE13 Thoc6-202ENSMUST00000095579 1450 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Ccdc17Q8CE13 Dctn1-203ENSMUST00000113913 4163 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Ccdc17Q8CE13 Zfp37-206ENSMUST00000222050 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Ccdc17Q8CE13 BC024139-202ENSMUST00000089654 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Ccdc17Q8CE13 5330417C22Rik-202ENSMUST00000106625 5836 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
Ccdc17Q8CE13 Ehd2-201ENSMUST00000098799 5119 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Ccdc17Q8CE13 Mid1-214ENSMUST00000163810 3689 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
Ccdc17Q8CE13 Snd1-206ENSMUST00000167201 3781 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Ccdc17Q8CE13 Pml-207ENSMUST00000135310 4413 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Ccdc17Q8CE13 Rab3gap2-204ENSMUST00000194740 4418 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
Ccdc17Q8CE13 Nmrk2-201ENSMUST00000005069 1854 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Ccdc17Q8CE13 Ankrd11-202ENSMUST00000098334 8455 ntAPPRIS P2 TSL 5 BASIC11.1□□□□□ -0.63
Ccdc17Q8CE13 Atp11c-202ENSMUST00000101527 6044 ntAPPRIS P4 TSL 1 (best) BASIC11.1□□□□□ -0.63
Ccdc17Q8CE13 Zmynd11-203ENSMUST00000110634 3824 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
Ccdc17Q8CE13 Dao-202ENSMUST00000112292 2057 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Ccdc17Q8CE13 Edil3-202ENSMUST00000081769 5317 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Ccdc17Q8CE13 AC137950.2-202ENSMUST00000227150 1635 ntBASIC11.1□□□□□ -0.63
Ccdc17Q8CE13 Gm8036-201ENSMUST00000118089 1718 ntBASIC11.1□□□□□ -0.63
Ccdc17Q8CE13 Gm4419-201ENSMUST00000180671 1729 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Ccdc17Q8CE13 Rasgrp4-208ENSMUST00000161522 3242 ntTSL 5 BASIC11.1□□□□□ -0.63
Ccdc17Q8CE13 Pou2f1-206ENSMUST00000111429 2679 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
Ccdc17Q8CE13 Flad1-204ENSMUST00000129308 2892 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Ccdc17Q8CE13 1700017B05Rik-202ENSMUST00000213199 3722 ntAPPRIS ALT2 TSL 2 BASIC11.1□□□□□ -0.63
Ccdc17Q8CE13 Dmrtc1b-201ENSMUST00000101324 1200 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
Ccdc17Q8CE13 Dmrtc1b-202ENSMUST00000113609 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Ccdc17Q8CE13 Gm12009-201ENSMUST00000121361 1100 ntBASIC11.1□□□□□ -0.63
Ccdc17Q8CE13 Gm24140-201ENSMUST00000122773 326 ntBASIC11.1□□□□□ -0.63
Ccdc17Q8CE13 Gm16069-201ENSMUST00000131146 545 ntTSL 3 BASIC11.1□□□□□ -0.63
Ccdc17Q8CE13 Tnni1-204ENSMUST00000139986 651 ntTSL 5 BASIC11.1□□□□□ -0.63
Ccdc17Q8CE13 Gm13031-201ENSMUST00000140501 924 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Ccdc17Q8CE13 Tctex1d1-205ENSMUST00000140654 891 ntAPPRIS ALT2 TSL 2 BASIC11.1□□□□□ -0.63
Ccdc17Q8CE13 Mir1941-201ENSMUST00000157834 83 ntBASIC11.1□□□□□ -0.63
Ccdc17Q8CE13 Gm8705-201ENSMUST00000180823 812 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Ccdc17Q8CE13 Gm26875-201ENSMUST00000181006 950 ntBASIC11.1□□□□□ -0.63
Ccdc17Q8CE13 Gm27316-201ENSMUST00000184884 277 ntBASIC11.1□□□□□ -0.63
Ccdc17Q8CE13 Gm42689-201ENSMUST00000202403 404 ntBASIC11.1□□□□□ -0.63
Ccdc17Q8CE13 Gm44420-201ENSMUST00000203669 490 ntBASIC11.1□□□□□ -0.63
Ccdc17Q8CE13 Gm45745-201ENSMUST00000211447 1180 ntBASIC11.1□□□□□ -0.63
Ccdc17Q8CE13 AC241616.1-201ENSMUST00000213741 166 ntBASIC11.1□□□□□ -0.63
Ccdc17Q8CE13 Gm40639-201ENSMUST00000214642 625 ntTSL 5 BASIC11.1□□□□□ -0.63
Ccdc17Q8CE13 Rab29-201ENSMUST00000027693 1226 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Ccdc17Q8CE13 Defb29-201ENSMUST00000060598 462 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Ccdc17Q8CE13 B430203G13Rik-201ENSMUST00000169657 1375 ntBASIC11.1□□□□□ -0.63
Ccdc17Q8CE13 Hottip-201ENSMUST00000141300 2346 ntTSL 2 BASIC11.1□□□□□ -0.63
Ccdc17Q8CE13 Synj2-203ENSMUST00000115784 2634 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Ccdc17Q8CE13 Ino80dos-201ENSMUST00000138611 1576 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Ccdc17Q8CE13 Etfbkmt-209ENSMUST00000179873 1576 ntAPPRIS P1 TSL 3 BASIC11.1□□□□□ -0.63
Ccdc17Q8CE13 4930579F01Rik-202ENSMUST00000199293 1598 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Ccdc17Q8CE13 Cd2bp2-207ENSMUST00000206026 2906 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Ccdc17Q8CE13 Plekhg4-203ENSMUST00000160191 3339 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
Ccdc17Q8CE13 Pla2g7-201ENSMUST00000024706 2097 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Ccdc17Q8CE13 Ccar2-201ENSMUST00000035612 3725 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Ccdc17Q8CE13 Qars-203ENSMUST00000134939 2374 ntTSL 5 BASIC11.1□□□□□ -0.63
Ccdc17Q8CE13 Chmp1b-202ENSMUST00000210564 2490 ntAPPRIS P1 BASIC11.1□□□□□ -0.63
Ccdc17Q8CE13 Dsc2-201ENSMUST00000039247 4630 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
Ccdc17Q8CE13 Cage1-201ENSMUST00000074969 2856 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
Ccdc17Q8CE13 Ackr3-201ENSMUST00000065587 3065 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Ccdc17Q8CE13 Gm19327-201ENSMUST00000220651 3271 ntBASIC11.1□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 52.6 ms