Protein–RNA interactions for Protein: Q3UHA3

Spg11, Spatacsin, mousemouse

Predictions only

Length 2,430 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Spg11Q3UHA3 Grik4-201ENSMUST00000034515 3413 ntAPPRIS P1 TSL 5 BASIC9.74□□□□□ -0.85
Spg11Q3UHA3 Gtf2ird1-207ENSMUST00000111245 3299 ntAPPRIS ALT2 TSL 1 (best) BASIC9.74□□□□□ -0.85
Spg11Q3UHA3 Plec-206ENSMUST00000074834 14855 ntAPPRIS ALT2 TSL 1 (best) BASIC9.74□□□□□ -0.85
Spg11Q3UHA3 Ccdc22-201ENSMUST00000033483 2353 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Spg11Q3UHA3 Erich5-201ENSMUST00000060894 2383 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Spg11Q3UHA3 Ly6e-210ENSMUST00000188866 2068 ntAPPRIS P1 TSL 3 BASIC9.74□□□□□ -0.85
Spg11Q3UHA3 Vwa8-201ENSMUST00000040990 7054 ntAPPRIS P2 TSL 5 BASIC9.74□□□□□ -0.85
Spg11Q3UHA3 Lgi4-201ENSMUST00000039775 4037 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Spg11Q3UHA3 Kiss1r-201ENSMUST00000045529 3163 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Spg11Q3UHA3 Smpd4-218ENSMUST00000170273 2166 ntTSL 5 BASIC9.74□□□□□ -0.85
Spg11Q3UHA3 Llgl1-202ENSMUST00000108719 4268 ntAPPRIS ALT2 TSL 1 (best) BASIC9.74□□□□□ -0.85
Spg11Q3UHA3 Gdpd5-208ENSMUST00000213887 2711 ntTSL 5 BASIC9.74□□□□□ -0.85
Spg11Q3UHA3 Tut1-201ENSMUST00000096239 2747 ntAPPRIS P1 TSL 2 BASIC9.74□□□□□ -0.85
Spg11Q3UHA3 Zfp37-206ENSMUST00000222050 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC9.74□□□□□ -0.85
Spg11Q3UHA3 Tpx2-201ENSMUST00000028969 3654 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Spg11Q3UHA3 Capn5-201ENSMUST00000040971 4498 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Spg11Q3UHA3 Gm26953-205ENSMUST00000212599 1435 ntTSL 5 BASIC9.74□□□□□ -0.85
Spg11Q3UHA3 Arg2-201ENSMUST00000021550 1428 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Spg11Q3UHA3 Babam2-203ENSMUST00000114507 1143 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
Spg11Q3UHA3 Gm26679-201ENSMUST00000181685 659 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
Spg11Q3UHA3 1700095B10Rik-201ENSMUST00000182349 978 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
Spg11Q3UHA3 1700019P21Rik-201ENSMUST00000186955 411 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
Spg11Q3UHA3 Gorasp1-201ENSMUST00000035099 3906 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Spg11Q3UHA3 Tcp10a-202ENSMUST00000128533 2589 ntAPPRIS P2 TSL 1 (best) BASIC9.74□□□□□ -0.85
Spg11Q3UHA3 Hook2-204ENSMUST00000210326 3080 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
Spg11Q3UHA3 Mcf2l-203ENSMUST00000110866 5108 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
Spg11Q3UHA3 Lats2-207ENSMUST00000173990 3834 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
Spg11Q3UHA3 Cdkl2-202ENSMUST00000086978 4066 ntAPPRIS P4 TSL 1 (best) BASIC9.74□□□□□ -0.85
Spg11Q3UHA3 Nudt7-203ENSMUST00000109109 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC9.74□□□□□ -0.85
Spg11Q3UHA3 Sult6b2-201ENSMUST00000111768 1475 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Spg11Q3UHA3 Lrrc8c-201ENSMUST00000067924 6976 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Spg11Q3UHA3 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC9.73□□□□□ -0.85
Spg11Q3UHA3 Arfgap1-201ENSMUST00000029092 2714 ntAPPRIS P3 TSL 1 (best) BASIC9.73□□□□□ -0.85
Spg11Q3UHA3 Ripk4-202ENSMUST00000113743 3743 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Spg11Q3UHA3 Vbp1-201ENSMUST00000033540 1595 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Spg11Q3UHA3 Mcm6-201ENSMUST00000027601 2910 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Spg11Q3UHA3 Gm4798-201ENSMUST00000218024 1699 ntBASIC9.73□□□□□ -0.85
Spg11Q3UHA3 Gzmb-201ENSMUST00000015581 1436 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Spg11Q3UHA3 Ptprk-201ENSMUST00000166468 6177 ntAPPRIS P2 TSL 2 BASIC9.73□□□□□ -0.85
Spg11Q3UHA3 Nfya-212ENSMUST00000162460 3706 ntAPPRIS P3 TSL 1 (best) BASIC9.73□□□□□ -0.85
Spg11Q3UHA3 Gm37472-201ENSMUST00000192342 4052 ntBASIC9.73□□□□□ -0.85
Spg11Q3UHA3 Gm12075-201ENSMUST00000117426 397 ntBASIC9.73□□□□□ -0.85
Spg11Q3UHA3 Gm11225-201ENSMUST00000118903 1049 ntBASIC9.73□□□□□ -0.85
Spg11Q3UHA3 Gm11888-201ENSMUST00000120471 810 ntBASIC9.73□□□□□ -0.85
Spg11Q3UHA3 Fhad1os1-201ENSMUST00000146094 997 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Spg11Q3UHA3 Gtsf1-206ENSMUST00000146675 756 ntAPPRIS P1 TSL 5 BASIC9.73□□□□□ -0.85
Spg11Q3UHA3 Gm14573-201ENSMUST00000150544 451 ntTSL 2 BASIC9.73□□□□□ -0.85
Spg11Q3UHA3 Gm5435-201ENSMUST00000179295 1150 ntBASIC9.73□□□□□ -0.85
Spg11Q3UHA3 Gm8388-201ENSMUST00000193000 756 ntBASIC9.73□□□□□ -0.85
Spg11Q3UHA3 Gm43787-201ENSMUST00000197792 1037 ntBASIC9.73□□□□□ -0.85
Spg11Q3UHA3 Gm32858-201ENSMUST00000205246 585 ntBASIC9.73□□□□□ -0.85
Spg11Q3UHA3 Gm5737-201ENSMUST00000208668 1272 ntAPPRIS P1 TSL 5 BASIC9.73□□□□□ -0.85
Spg11Q3UHA3 Gm45363-201ENSMUST00000210196 1294 ntBASIC9.73□□□□□ -0.85
Spg11Q3UHA3 Pln-205ENSMUST00000219921 531 ntAPPRIS P1 TSL 2 BASIC9.73□□□□□ -0.85
Spg11Q3UHA3 Tubgcp2-201ENSMUST00000026547 2960 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Spg11Q3UHA3 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Spg11Q3UHA3 A1bg-201ENSMUST00000096418 1821 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Spg11Q3UHA3 Kcna10-201ENSMUST00000055064 1913 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Spg11Q3UHA3 Gfap-201ENSMUST00000067444 2648 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Spg11Q3UHA3 Ccser2-202ENSMUST00000090024 7509 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Spg11Q3UHA3 Pdha2-201ENSMUST00000057860 2352 ntAPPRIS P1 BASIC9.73□□□□□ -0.85
Spg11Q3UHA3 Gm14698-201ENSMUST00000096420 4226 ntAPPRIS P1 BASIC9.73□□□□□ -0.85
Spg11Q3UHA3 St14-201ENSMUST00000034478 3259 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Spg11Q3UHA3 Mroh5-202ENSMUST00000110021 2145 ntAPPRIS ALT2 TSL 1 (best) BASIC9.73□□□□□ -0.85
Spg11Q3UHA3 Gm45428-201ENSMUST00000209619 1789 ntBASIC9.73□□□□□ -0.85
Spg11Q3UHA3 Nell2-202ENSMUST00000166170 3366 ntAPPRIS P1 TSL 5 BASIC9.73□□□□□ -0.85
Spg11Q3UHA3 Ces2a-204ENSMUST00000164182 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC9.73□□□□□ -0.85
Spg11Q3UHA3 Hipk3-201ENSMUST00000028600 7454 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Spg11Q3UHA3 Sox7-201ENSMUST00000079652 3299 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Spg11Q3UHA3 Mrpl55-205ENSMUST00000108787 718 ntTSL 2 BASIC9.73□□□□□ -0.85
Spg11Q3UHA3 Gm11514-201ENSMUST00000117670 432 ntBASIC9.73□□□□□ -0.85
Spg11Q3UHA3 Gm14686-201ENSMUST00000119926 343 ntBASIC9.73□□□□□ -0.85
Spg11Q3UHA3 Gm11670-201ENSMUST00000143435 511 ntTSL 2 BASIC9.73□□□□□ -0.85
Spg11Q3UHA3 Gm24300-201ENSMUST00000177809 109 ntBASIC9.73□□□□□ -0.85
Spg11Q3UHA3 Gm24017-201ENSMUST00000178726 109 ntBASIC9.73□□□□□ -0.85
Spg11Q3UHA3 Gm23952-201ENSMUST00000179380 109 ntBASIC9.73□□□□□ -0.85
Spg11Q3UHA3 Olfr1415-203ENSMUST00000204766 403 ntTSL 3 BASIC9.73□□□□□ -0.85
Spg11Q3UHA3 Psenen-203ENSMUST00000207747 669 ntAPPRIS P1 TSL 2 BASIC9.73□□□□□ -0.85
Spg11Q3UHA3 Cox7a1-202ENSMUST00000208441 485 ntTSL 2 BASIC9.73□□□□□ -0.85
Spg11Q3UHA3 Gm11149-202ENSMUST00000215070 1169 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Spg11Q3UHA3 AC154528.3-201ENSMUST00000228011 679 ntBASIC9.73□□□□□ -0.85
Spg11Q3UHA3 Zfp354a-202ENSMUST00000102766 2592 ntAPPRIS P3 TSL 1 (best) BASIC9.73□□□□□ -0.85
Spg11Q3UHA3 Car10-206ENSMUST00000107863 3334 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Spg11Q3UHA3 Golga4-201ENSMUST00000084820 7583 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Spg11Q3UHA3 Rbm14-202ENSMUST00000113793 3508 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Spg11Q3UHA3 Ppp2r1b-201ENSMUST00000034560 3647 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Spg11Q3UHA3 Clec10a-209ENSMUST00000178945 2332 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Spg11Q3UHA3 Rep15-201ENSMUST00000036194 1662 ntAPPRIS P1 BASIC9.73□□□□□ -0.85
Spg11Q3UHA3 Nr4a2-202ENSMUST00000112627 2400 ntTSL 5 BASIC9.73□□□□□ -0.85
Spg11Q3UHA3 Zfp69-202ENSMUST00000106281 1764 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Spg11Q3UHA3 Kifap3-202ENSMUST00000077642 4012 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Spg11Q3UHA3 Fn1-211ENSMUST00000187938 7965 ntAPPRIS ALT2 TSL 1 (best) BASIC9.72□□□□□ -0.85
Spg11Q3UHA3 Tmem132a-201ENSMUST00000025645 3657 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Spg11Q3UHA3 Vangl1-208ENSMUST00000168312 1740 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Spg11Q3UHA3 Gm5535-201ENSMUST00000099292 1743 ntTSL 2 BASIC9.72□□□□□ -0.85
Spg11Q3UHA3 Bach2-201ENSMUST00000037416 3462 ntAPPRIS ALT2 TSL 5 BASIC9.72□□□□□ -0.85
Spg11Q3UHA3 Tbc1d1-201ENSMUST00000043893 6471 ntAPPRIS ALT2 TSL 2 BASIC9.72□□□□□ -0.85
Spg11Q3UHA3 Vezt-202ENSMUST00000118077 2223 ntAPPRIS ALT2 TSL 1 (best) BASIC9.72□□□□□ -0.85
Spg11Q3UHA3 Acsl6-203ENSMUST00000072178 2432 ntAPPRIS P5 TSL 5 BASIC9.72□□□□□ -0.85
Spg11Q3UHA3 Sp6-201ENSMUST00000047997 3546 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Retrieved 100 of 76,532 protein–RNA pairs in 48.3 ms