Protein–RNA interactions for Protein: P97496

Smarcc1, SWI/SNF complex subunit SMARCC1, mousemouse

Predictions only

Length 1,104 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcc1P97496 Adgre5-203ENSMUST00000109802 2867 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Smarcc1P97496 Gm37931-201ENSMUST00000194686 2866 ntBASIC13.3□□□□□ -0.28
Smarcc1P97496 Morf4l2-215ENSMUST00000169418 1782 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
Smarcc1P97496 AC124732.3-201ENSMUST00000221835 1765 ntBASIC13.3□□□□□ -0.28
Smarcc1P97496 Gm26953-209ENSMUST00000213051 2087 ntTSL 5 BASIC13.3□□□□□ -0.28
Smarcc1P97496 1700061G19Rik-201ENSMUST00000025048 2677 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Smarcc1P97496 AW549877-201ENSMUST00000046633 5076 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Smarcc1P97496 Mmd2-201ENSMUST00000037048 3317 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Smarcc1P97496 Ccdc191-201ENSMUST00000122014 1822 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Smarcc1P97496 Gm19178-201ENSMUST00000217524 1819 ntBASIC13.3□□□□□ -0.28
Smarcc1P97496 Helq-201ENSMUST00000044684 3689 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Smarcc1P97496 Gcn1l1-201ENSMUST00000064454 8555 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Smarcc1P97496 Ep400-202ENSMUST00000112433 3399 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Smarcc1P97496 Dab2-203ENSMUST00000110663 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Smarcc1P97496 Slc36a4-201ENSMUST00000061568 6539 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Smarcc1P97496 Etv1-204ENSMUST00000160701 1578 ntTSL 5 BASIC13.3□□□□□ -0.28
Smarcc1P97496 Eps8l2-201ENSMUST00000026577 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Smarcc1P97496 Cenpx-204ENSMUST00000106155 700 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Smarcc1P97496 Gm13758-201ENSMUST00000118699 743 ntBASIC13.3□□□□□ -0.28
Smarcc1P97496 Maats1os-201ENSMUST00000133496 326 ntTSL 3 BASIC13.3□□□□□ -0.28
Smarcc1P97496 Gm15419-201ENSMUST00000148654 743 ntTSL 3 BASIC13.3□□□□□ -0.28
Smarcc1P97496 Gm9513-201ENSMUST00000165591 306 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Smarcc1P97496 Gm21963-201ENSMUST00000179519 330 ntBASIC13.3□□□□□ -0.28
Smarcc1P97496 Gm27168-201ENSMUST00000183394 361 ntTSL 3 BASIC13.3□□□□□ -0.28
Smarcc1P97496 Gm21083-201ENSMUST00000188807 1141 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Smarcc1P97496 1700018G05Rik-201ENSMUST00000211116 386 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Smarcc1P97496 Pcbd1-202ENSMUST00000218005 361 ntTSL 3 BASIC13.3□□□□□ -0.28
Smarcc1P97496 Elmo2-201ENSMUST00000071699 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Smarcc1P97496 Npepps-201ENSMUST00000001480 4215 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Smarcc1P97496 Gm2822-201ENSMUST00000164299 2910 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Smarcc1P97496 Gm45206-201ENSMUST00000206885 2285 ntBASIC13.3□□□□□ -0.28
Smarcc1P97496 Gm14538-201ENSMUST00000122019 1327 ntBASIC13.3□□□□□ -0.28
Smarcc1P97496 Gm29590-201ENSMUST00000190396 1304 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Smarcc1P97496 Cd247-202ENSMUST00000027849 1317 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Smarcc1P97496 Rasgef1b-203ENSMUST00000146396 3339 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Smarcc1P97496 C230024C17Rik-201ENSMUST00000190663 3337 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Smarcc1P97496 Gm26823-201ENSMUST00000181425 2361 ntTSL 5 BASIC13.3□□□□□ -0.28
Smarcc1P97496 Dglucy-202ENSMUST00000110069 3058 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Smarcc1P97496 Syncrip-208ENSMUST00000174282 3404 ntAPPRIS ALT1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Smarcc1P97496 Gm44975-201ENSMUST00000207435 1390 ntBASIC13.3□□□□□ -0.28
Smarcc1P97496 Frmpd2-203ENSMUST00000208577 5192 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Smarcc1P97496 Spert-201ENSMUST00000035243 1430 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Smarcc1P97496 Gm5859-201ENSMUST00000165401 2324 ntBASIC13.29□□□□□ -0.28
Smarcc1P97496 Gucy1a3-204ENSMUST00000193924 4710 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Smarcc1P97496 Nol3-201ENSMUST00000014920 3176 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Smarcc1P97496 Serpina1f-202ENSMUST00000117053 2830 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Smarcc1P97496 Csnk1a1-204ENSMUST00000165123 4083 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Smarcc1P97496 Pbrm1-208ENSMUST00000112098 6566 ntTSL 5 BASIC13.29□□□□□ -0.28
Smarcc1P97496 Plin4-201ENSMUST00000002908 5755 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Smarcc1P97496 Utp23-203ENSMUST00000137116 2921 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Smarcc1P97496 Ptprt-203ENSMUST00000109443 12112 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Smarcc1P97496 Gm16083-201ENSMUST00000125681 2547 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Smarcc1P97496 Ppp1r2-ps4-201ENSMUST00000112182 633 ntBASIC13.29□□□□□ -0.28
Smarcc1P97496 Spata3-205ENSMUST00000130504 1100 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Smarcc1P97496 Gm13898-201ENSMUST00000141865 610 ntBASIC13.29□□□□□ -0.28
Smarcc1P97496 Gm13778-202ENSMUST00000146633 537 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Smarcc1P97496 C130080G10Rik-204ENSMUST00000155185 954 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Smarcc1P97496 Ubl5-203ENSMUST00000160124 501 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
Smarcc1P97496 Tex35-206ENSMUST00000187546 856 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Smarcc1P97496 Gm7812-201ENSMUST00000203479 874 ntBASIC13.29□□□□□ -0.28
Smarcc1P97496 Gm32098-201ENSMUST00000211305 479 ntTSL 5 BASIC13.29□□□□□ -0.28
Smarcc1P97496 AC156274.1-201ENSMUST00000219193 634 ntBASIC13.29□□□□□ -0.28
Smarcc1P97496 Gm36172-201ENSMUST00000219852 723 ntTSL 3 BASIC13.29□□□□□ -0.28
Smarcc1P97496 Gm5292-201ENSMUST00000073317 580 ntBASIC13.29□□□□□ -0.28
Smarcc1P97496 Gm38187-201ENSMUST00000195609 4709 ntBASIC13.29□□□□□ -0.28
Smarcc1P97496 Gm26586-201ENSMUST00000181918 1745 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Smarcc1P97496 Trappc11-201ENSMUST00000039061 4332 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Smarcc1P97496 Gm16677-201ENSMUST00000181229 2174 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Smarcc1P97496 Gm27174-201ENSMUST00000184493 2174 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Smarcc1P97496 Pigc-201ENSMUST00000028021 2196 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Smarcc1P97496 Fcho1-201ENSMUST00000093444 3073 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Smarcc1P97496 Dennd4c-202ENSMUST00000082026 7940 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Smarcc1P97496 Map4-214ENSMUST00000199498 4055 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Smarcc1P97496 Gm37582-201ENSMUST00000192953 1409 ntBASIC13.29□□□□□ -0.28
Smarcc1P97496 Gm26778-201ENSMUST00000181443 3805 ntTSL 5 BASIC13.29□□□□□ -0.28
Smarcc1P97496 Arxes1-201ENSMUST00000057625 1580 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
Smarcc1P97496 Zfp652-201ENSMUST00000091565 2663 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Smarcc1P97496 Dip2c-202ENSMUST00000169960 4801 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Smarcc1P97496 Plrg1-202ENSMUST00000122128 1608 ntTSL 5 BASIC13.28□□□□□ -0.28
Smarcc1P97496 Cyp7b1-201ENSMUST00000035625 2166 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Smarcc1P97496 Thsd4-202ENSMUST00000098660 8796 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Smarcc1P97496 Fbn2-201ENSMUST00000025497 10480 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Smarcc1P97496 Tshz3-201ENSMUST00000021641 5098 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Smarcc1P97496 Gm38376-201ENSMUST00000195493 2253 ntBASIC13.28□□□□□ -0.28
Smarcc1P97496 Adora1-203ENSMUST00000169927 4581 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Smarcc1P97496 Spred2-201ENSMUST00000093298 2852 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Smarcc1P97496 Top3a-204ENSMUST00000120417 2318 ntTSL 5 BASIC13.28□□□□□ -0.28
Smarcc1P97496 Slc9a1-201ENSMUST00000030669 4676 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Smarcc1P97496 Olfr707-204ENSMUST00000213251 1777 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Smarcc1P97496 Zfp689-201ENSMUST00000053392 3621 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Smarcc1P97496 Clvs2-204ENSMUST00000161692 4283 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Smarcc1P97496 Uaca-201ENSMUST00000050183 4428 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Smarcc1P97496 Gm16439-201ENSMUST00000100687 564 ntBASIC13.28□□□□□ -0.28
Smarcc1P97496 2810403D21Rik-204ENSMUST00000144421 747 ntTSL 3 BASIC13.28□□□□□ -0.28
Smarcc1P97496 Aif1l-207ENSMUST00000148056 670 ntTSL 5 BASIC13.28□□□□□ -0.28
Smarcc1P97496 Gm26021-201ENSMUST00000158664 131 ntBASIC13.28□□□□□ -0.28
Smarcc1P97496 Gm29593-201ENSMUST00000189827 620 ntTSL 5 BASIC13.28□□□□□ -0.28
Smarcc1P97496 1700030N03Rik-206ENSMUST00000191405 651 ntTSL 3 BASIC13.28□□□□□ -0.28
Smarcc1P97496 Gm37872-201ENSMUST00000192362 886 ntTSL 5 BASIC13.28□□□□□ -0.28
Smarcc1P97496 Gm18539-201ENSMUST00000204745 1090 ntBASIC13.28□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 42.9 ms