Protein–RNA interactions for Protein: P62313

Lsm6, U6 snRNA-associated Sm-like protein LSm6, mousemouse

Known RBP Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm6P62313 Rhox8-201ENSMUST00000071885 1204 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Lsm6P62313 Snu13-202ENSMUST00000080622 1283 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Lsm6P62313 Prnd-201ENSMUST00000110169 1918 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Lsm6P62313 Cap2-202ENSMUST00000119341 2454 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Lsm6P62313 Gm42571-201ENSMUST00000201197 2464 ntBASIC9.32□□□□□ -0.92
Lsm6P62313 Ncam1-201ENSMUST00000114476 2567 ntAPPRIS ALT2 TSL 1 (best) BASIC9.32□□□□□ -0.92
Lsm6P62313 Efcab12-201ENSMUST00000032468 2551 ntAPPRIS P1 TSL 5 BASIC9.32□□□□□ -0.92
Lsm6P62313 A130010J15Rik-205ENSMUST00000178744 3782 ntAPPRIS P1 TSL 2 BASIC9.32□□□□□ -0.92
Lsm6P62313 Slc17a5-201ENSMUST00000052441 3236 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Lsm6P62313 March10-201ENSMUST00000049995 3074 ntAPPRIS P1 TSL 5 BASIC9.32□□□□□ -0.92
Lsm6P62313 Madd-202ENSMUST00000066473 5974 ntAPPRIS ALT2 TSL 5 BASIC9.32□□□□□ -0.92
Lsm6P62313 Gm29773-201ENSMUST00000212751 1895 ntTSL 2 BASIC9.32□□□□□ -0.92
Lsm6P62313 Toe1-201ENSMUST00000030451 2090 ntAPPRIS P2 TSL 1 (best) BASIC9.32□□□□□ -0.92
Lsm6P62313 Dhx34-204ENSMUST00000121123 3880 ntAPPRIS ALT2 TSL 5 BASIC9.31□□□□□ -0.92
Lsm6P62313 Ano4-202ENSMUST00000181976 1410 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
Lsm6P62313 Spert-201ENSMUST00000035243 1430 ntAPPRIS P3 TSL 1 (best) BASIC9.31□□□□□ -0.92
Lsm6P62313 Bmp4-202ENSMUST00000100676 1633 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Lsm6P62313 Gm15832-201ENSMUST00000146314 1832 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
Lsm6P62313 Zfp605-202ENSMUST00000112528 3158 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Lsm6P62313 Ptbp1-206ENSMUST00000165704 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC9.31□□□□□ -0.92
Lsm6P62313 2210010C04Rik-201ENSMUST00000031931 2142 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Lsm6P62313 Hspa2-201ENSMUST00000080449 2524 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Lsm6P62313 Dzip1l-203ENSMUST00000112885 4350 ntAPPRIS P3 TSL 1 (best) BASIC9.31□□□□□ -0.92
Lsm6P62313 Wipf2-201ENSMUST00000037480 7011 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Lsm6P62313 Otof-201ENSMUST00000074171 7129 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Lsm6P62313 Med24-202ENSMUST00000100500 3133 ntAPPRIS ALT2 TSL 5 BASIC9.31□□□□□ -0.92
Lsm6P62313 Mkrn2os-202ENSMUST00000112957 964 ntAPPRIS P1 TSL 2 BASIC9.31□□□□□ -0.92
Lsm6P62313 Gm11824-201ENSMUST00000120191 846 ntBASIC9.31□□□□□ -0.92
Lsm6P62313 Hmgn2-208ENSMUST00000136327 772 ntTSL 2 BASIC9.31□□□□□ -0.92
Lsm6P62313 Ubl5-211ENSMUST00000162303 505 ntAPPRIS P1 TSL 2 BASIC9.31□□□□□ -0.92
Lsm6P62313 Mir6998-201ENSMUST00000183343 64 ntBASIC9.31□□□□□ -0.92
Lsm6P62313 1700008A23Rik-201ENSMUST00000191694 691 ntBASIC9.31□□□□□ -0.92
Lsm6P62313 Gm43692-201ENSMUST00000198236 1062 ntBASIC9.31□□□□□ -0.92
Lsm6P62313 Rp9-204ENSMUST00000216973 796 ntAPPRIS ALT2 TSL 3 BASIC9.31□□□□□ -0.92
Lsm6P62313 CT009713.2-201ENSMUST00000225532 1149 ntBASIC9.31□□□□□ -0.92
Lsm6P62313 Scg5-201ENSMUST00000024005 1208 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Lsm6P62313 Plp2-201ENSMUST00000033486 1157 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Lsm6P62313 Rnf181-202ENSMUST00000069595 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC9.31□□□□□ -0.92
Lsm6P62313 Olfr525-201ENSMUST00000078103 1050 ntAPPRIS P1 BASIC9.31□□□□□ -0.92
Lsm6P62313 Arsb-201ENSMUST00000091403 4038 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Lsm6P62313 4933422A05Rik-201ENSMUST00000213706 1356 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
Lsm6P62313 Sparc-207ENSMUST00000213866 1366 ntAPPRIS ALT2 TSL 5 BASIC9.31□□□□□ -0.92
Lsm6P62313 Cd3e-201ENSMUST00000102832 1462 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Lsm6P62313 Gnrhr-202ENSMUST00000094654 1475 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
Lsm6P62313 Gm45012-201ENSMUST00000208323 1666 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
Lsm6P62313 Hsd3b1-202ENSMUST00000107016 1855 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Lsm6P62313 Ankub1-202ENSMUST00000197088 1854 ntAPPRIS P1 TSL 5 BASIC9.31□□□□□ -0.92
Lsm6P62313 4930578C19Rik-201ENSMUST00000044188 1896 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Lsm6P62313 1700018A04Rik-204ENSMUST00000221561 2569 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
Lsm6P62313 Osbpl7-206ENSMUST00000168565 3535 ntAPPRIS ALT2 TSL 5 BASIC9.31□□□□□ -0.92
Lsm6P62313 Uhrf1-202ENSMUST00000113035 3402 ntAPPRIS ALT2 TSL 1 (best) BASIC9.31□□□□□ -0.92
Lsm6P62313 Slc25a44-203ENSMUST00000193433 3429 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Lsm6P62313 Gpsm1-201ENSMUST00000066889 3432 ntAPPRIS ALT2 TSL 1 (best) BASIC9.31□□□□□ -0.92
Lsm6P62313 Piwil1-202ENSMUST00000195959 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC9.31□□□□□ -0.92
Lsm6P62313 Zfp780b-201ENSMUST00000081618 3004 ntAPPRIS P1 TSL 5 BASIC9.31□□□□□ -0.92
Lsm6P62313 Cux1-211ENSMUST00000176745 2831 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
Lsm6P62313 AC164092.1-201ENSMUST00000215635 2232 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
Lsm6P62313 Nr4a2-201ENSMUST00000028166 3568 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Lsm6P62313 Pde4c-202ENSMUST00000110095 3290 ntAPPRIS P2 TSL 1 (best) BASIC9.3□□□□□ -0.92
Lsm6P62313 Gm26865-201ENSMUST00000180970 3284 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
Lsm6P62313 Scrn1-201ENSMUST00000019268 4810 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Lsm6P62313 Sema4g-201ENSMUST00000026225 4548 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Lsm6P62313 Zbtb21-202ENSMUST00000063605 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC9.3□□□□□ -0.92
Lsm6P62313 Olfr222-202ENSMUST00000214351 2474 ntAPPRIS P1 TSL 5 BASIC9.3□□□□□ -0.92
Lsm6P62313 Brcc3-203ENSMUST00000118428 2093 ntAPPRIS ALT2 TSL 5 BASIC9.3□□□□□ -0.92
Lsm6P62313 Pcdh10-202ENSMUST00000170695 8234 ntAPPRIS P3 TSL 1 (best) BASIC9.3□□□□□ -0.92
Lsm6P62313 Cfb-207ENSMUST00000176203 2733 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
Lsm6P62313 Gm13583-202ENSMUST00000151931 1476 ntTSL 2 BASIC9.3□□□□□ -0.92
Lsm6P62313 Hmgcr-201ENSMUST00000022176 4425 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Lsm6P62313 Ccdc136-202ENSMUST00000115275 3279 ntAPPRIS ALT2 TSL 5 BASIC9.3□□□□□ -0.92
Lsm6P62313 Dqx1-201ENSMUST00000077502 3257 ntAPPRIS P1 TSL 5 BASIC9.3□□□□□ -0.92
Lsm6P62313 Rtbdn-202ENSMUST00000109740 1363 ntAPPRIS P2 TSL 1 (best) BASIC9.3□□□□□ -0.92
Lsm6P62313 Klhdc10-206ENSMUST00000144272 1387 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
Lsm6P62313 Enpp7-201ENSMUST00000092373 1370 ntAPPRIS P2 TSL 2 BASIC9.3□□□□□ -0.92
Lsm6P62313 Smarca2-201ENSMUST00000025862 5921 ntAPPRIS P2 TSL 5 BASIC9.3□□□□□ -0.92
Lsm6P62313 Hsdl1-204ENSMUST00000212517 2215 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
Lsm6P62313 Tcf4-203ENSMUST00000114977 3070 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
Lsm6P62313 Bnip3l-ps-201ENSMUST00000101577 657 ntBASIC9.3□□□□□ -0.92
Lsm6P62313 Palm2-201ENSMUST00000102904 2958 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Lsm6P62313 Ighv13-1-201ENSMUST00000103480 294 ntBASIC9.3□□□□□ -0.92
Lsm6P62313 Bri3-202ENSMUST00000110695 669 ntTSL 2 BASIC9.3□□□□□ -0.92
Lsm6P62313 Gm15031-201ENSMUST00000121341 210 ntBASIC9.3□□□□□ -0.92
Lsm6P62313 Gm12367-202ENSMUST00000146909 2105 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
Lsm6P62313 Ndufc2-202ENSMUST00000149122 470 ntTSL 2 BASIC9.3□□□□□ -0.92
Lsm6P62313 Tmem229b-ps-201ENSMUST00000168554 506 ntBASIC9.3□□□□□ -0.92
Lsm6P62313 Gm5801-201ENSMUST00000182247 780 ntBASIC9.3□□□□□ -0.92
Lsm6P62313 Gm26982-201ENSMUST00000182250 1151 ntBASIC9.3□□□□□ -0.92
Lsm6P62313 Gm18035-201ENSMUST00000211962 589 ntBASIC9.3□□□□□ -0.92
Lsm6P62313 4930448E22Rik-203ENSMUST00000215349 299 ntTSL 3 BASIC9.3□□□□□ -0.92
Lsm6P62313 Bnip3l-ps-202ENSMUST00000220709 1132 ntBASIC9.3□□□□□ -0.92
Lsm6P62313 AC102847.1-202ENSMUST00000226313 1245 ntBASIC9.3□□□□□ -0.92
Lsm6P62313 Ddr1-201ENSMUST00000003628 3802 ntAPPRIS P3 TSL 1 (best) BASIC9.3□□□□□ -0.92
Lsm6P62313 Arhgap24-204ENSMUST00000112852 2783 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
Lsm6P62313 Adam20-201ENSMUST00000056331 2589 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Lsm6P62313 Gm5697-201ENSMUST00000122295 2482 ntBASIC9.3□□□□□ -0.92
Lsm6P62313 Prrg3-201ENSMUST00000048790 5931 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Lsm6P62313 Bckdk-207ENSMUST00000206745 1702 ntTSL 5 BASIC9.3□□□□□ -0.92
Lsm6P62313 Tram2-201ENSMUST00000037998 6492 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Lsm6P62313 Ints3-201ENSMUST00000029542 4337 ntAPPRIS P2 TSL 1 (best) BASIC9.3□□□□□ -0.92
Lsm6P62313 Gm27177-201ENSMUST00000183339 2946 ntTSL 5 BASIC9.3□□□□□ -0.92
Retrieved 100 of 76,532 protein–RNA pairs in 41 ms