Protein–RNA interactions for Protein: P40201

Chd1, Chromodomain-helicase-DNA-binding protein 1, mousemouse

Predictions only

Length 1,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd1P40201 Adat1-203ENSMUST00000139820 2762 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Chd1P40201 Tmem41b-203ENSMUST00000119929 2346 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Chd1P40201 Tmem74bos-202ENSMUST00000149319 2090 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Chd1P40201 Map4k2-201ENSMUST00000025897 4644 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Chd1P40201 Gm15550-201ENSMUST00000120824 1748 ntBASIC15.55■□□□□ 0.08
Chd1P40201 Galm-201ENSMUST00000039205 2314 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Chd1P40201 Wdr45-202ENSMUST00000115687 1299 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Chd1P40201 Magea7-ps-201ENSMUST00000117727 960 ntBASIC15.55■□□□□ 0.08
Chd1P40201 Gm15355-201ENSMUST00000118929 285 ntBASIC15.55■□□□□ 0.08
Chd1P40201 Gm8254-201ENSMUST00000182326 972 ntBASIC15.55■□□□□ 0.08
Chd1P40201 Mir6378-201ENSMUST00000183357 107 ntBASIC15.55■□□□□ 0.08
Chd1P40201 D7Ertd128e-201ENSMUST00000189744 928 ntTSL 2 BASIC15.55■□□□□ 0.08
Chd1P40201 Gm30709-202ENSMUST00000222476 956 ntTSL 5 BASIC15.55■□□□□ 0.08
Chd1P40201 Gm43305-202ENSMUST00000225083 705 ntBASIC15.55■□□□□ 0.08
Chd1P40201 Gm25129-201ENSMUST00000082651 133 ntBASIC15.55■□□□□ 0.08
Chd1P40201 Pilra-202ENSMUST00000110980 1371 ntAPPRIS ALT2 TSL 2 BASIC15.55■□□□□ 0.08
Chd1P40201 Tmem151a-201ENSMUST00000077066 4006 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Chd1P40201 Gm45675-201ENSMUST00000211202 3429 ntBASIC15.55■□□□□ 0.08
Chd1P40201 Pou2f1-202ENSMUST00000069609 2402 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
Chd1P40201 Celf2-224ENSMUST00000182879 2223 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Chd1P40201 A530006G24Rik-201ENSMUST00000152542 1331 ntTSL 2 BASIC15.55■□□□□ 0.08
Chd1P40201 Fgfr3-215ENSMUST00000202138 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Chd1P40201 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
Chd1P40201 Dgke-201ENSMUST00000000285 5208 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Chd1P40201 CT010498.2-201ENSMUST00000225690 1659 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
Chd1P40201 Fam71e2-202ENSMUST00000174409 2716 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
Chd1P40201 Gm8818-201ENSMUST00000110797 1047 ntBASIC15.54■□□□□ 0.08
Chd1P40201 Gm7799-201ENSMUST00000133080 476 ntBASIC15.54■□□□□ 0.08
Chd1P40201 4933431E20Rik-205ENSMUST00000137970 795 ntTSL 3 BASIC15.54■□□□□ 0.08
Chd1P40201 Gm12746-201ENSMUST00000151369 615 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Chd1P40201 Camsap3-203ENSMUST00000207077 3832 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Chd1P40201 Gm16252-202ENSMUST00000215604 1232 ntTSL 5 BASIC15.54■□□□□ 0.08
Chd1P40201 Cbx1-203ENSMUST00000093943 1251 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Chd1P40201 Vmn1r212-201ENSMUST00000095960 1164 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
Chd1P40201 Tmem168-206ENSMUST00000149123 3337 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Chd1P40201 Serhl-205ENSMUST00000166427 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Chd1P40201 Gm10305-201ENSMUST00000195331 2475 ntBASIC15.54■□□□□ 0.08
Chd1P40201 Sord-201ENSMUST00000110551 2352 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Chd1P40201 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Chd1P40201 Loxl2-201ENSMUST00000022660 5316 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Chd1P40201 Grin2b-205ENSMUST00000152012 2461 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Chd1P40201 Eps8l1-204ENSMUST00000163893 3868 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Chd1P40201 Cct3-204ENSMUST00000164166 1804 ntTSL 5 BASIC15.54■□□□□ 0.08
Chd1P40201 Hdac5-204ENSMUST00000107152 3788 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
Chd1P40201 Gm46992-201ENSMUST00000222120 1389 ntBASIC15.54■□□□□ 0.08
Chd1P40201 Pex5-205ENSMUST00000112532 3148 ntAPPRIS P4 TSL 1 (best) BASIC15.54■□□□□ 0.08
Chd1P40201 Gm23659-201ENSMUST00000102245 110 ntBASIC15.54■□□□□ 0.08
Chd1P40201 Mkrn2os-202ENSMUST00000112957 964 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
Chd1P40201 Rhox4c-201ENSMUST00000115183 903 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Chd1P40201 Gm15942-201ENSMUST00000136305 810 ntTSL 5 BASIC15.54■□□□□ 0.08
Chd1P40201 Gm22881-201ENSMUST00000157747 134 ntBASIC15.54■□□□□ 0.08
Chd1P40201 Gm17169-201ENSMUST00000171382 351 ntBASIC15.54■□□□□ 0.08
Chd1P40201 Gm43442-201ENSMUST00000202865 414 ntBASIC15.54■□□□□ 0.08
Chd1P40201 Gm45126-201ENSMUST00000206702 960 ntBASIC15.54■□□□□ 0.08
Chd1P40201 AC154687.1-201ENSMUST00000224875 677 ntBASIC15.54■□□□□ 0.08
Chd1P40201 Uchl4-201ENSMUST00000039011 1162 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
Chd1P40201 Churc1-201ENSMUST00000041262 676 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Chd1P40201 Olfr73-201ENSMUST00000099838 942 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
Chd1P40201 Camk2d-206ENSMUST00000106402 4180 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Chd1P40201 Gm33940-201ENSMUST00000209205 1601 ntTSL 5 BASIC15.54■□□□□ 0.08
Chd1P40201 Rassf9-201ENSMUST00000055355 1526 ntTSL 5 BASIC15.54■□□□□ 0.08
Chd1P40201 Grm2-201ENSMUST00000023959 4711 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
Chd1P40201 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Chd1P40201 Rad54b-201ENSMUST00000070755 2870 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Chd1P40201 Pex26-201ENSMUST00000088561 4093 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
Chd1P40201 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC15.53■□□□□ 0.08
Chd1P40201 Gm17029-203ENSMUST00000153443 2758 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Chd1P40201 Tlr12-201ENSMUST00000074829 3177 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
Chd1P40201 Lrmp-201ENSMUST00000032396 2319 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Chd1P40201 Unc45a-201ENSMUST00000032748 3260 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Chd1P40201 Rbm4b-201ENSMUST00000036744 1783 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Chd1P40201 n-R5s90-201ENSMUST00000103968 118 ntBASIC15.53■□□□□ 0.08
Chd1P40201 Cuta-202ENSMUST00000114935 597 ntAPPRIS ALT1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Chd1P40201 Bdh2-202ENSMUST00000120397 1172 ntTSL 5 BASIC15.53■□□□□ 0.08
Chd1P40201 Gm16077-201ENSMUST00000121915 655 ntBASIC15.53■□□□□ 0.08
Chd1P40201 BC048671-202ENSMUST00000167550 890 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Chd1P40201 Mir3093-201ENSMUST00000175247 87 ntBASIC15.53■□□□□ 0.08
Chd1P40201 Gm4891-201ENSMUST00000182279 912 ntBASIC15.53■□□□□ 0.08
Chd1P40201 Gm31243-201ENSMUST00000197498 632 ntTSL 2 BASIC15.53■□□□□ 0.08
Chd1P40201 Gm43049-201ENSMUST00000198099 462 ntTSL 3 BASIC15.53■□□□□ 0.08
Chd1P40201 CT033781.3-201ENSMUST00000221886 504 ntTSL 2 BASIC15.53■□□□□ 0.08
Chd1P40201 Gm6353-201ENSMUST00000223234 1051 ntBASIC15.53■□□□□ 0.08
Chd1P40201 Rcbtb2-223ENSMUST00000170677 3573 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Chd1P40201 Serpinf2-202ENSMUST00000108437 2179 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Chd1P40201 2810006K23Rik-201ENSMUST00000077376 1677 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Chd1P40201 Tfe3-203ENSMUST00000101695 2989 ntTSL 5 BASIC15.53■□□□□ 0.08
Chd1P40201 Gm43225-201ENSMUST00000201381 1439 ntBASIC15.53■□□□□ 0.08
Chd1P40201 2810430I11Rik-201ENSMUST00000154246 3416 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Chd1P40201 Mrps30-201ENSMUST00000022245 3319 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Chd1P40201 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Chd1P40201 C530005A16Rik-201ENSMUST00000142815 2436 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Chd1P40201 Hyal2-206ENSMUST00000195681 2968 ntBASIC15.52■□□□□ 0.08
Chd1P40201 Gm21136-201ENSMUST00000186812 2575 ntBASIC15.52■□□□□ 0.08
Chd1P40201 Gm6605-201ENSMUST00000031488 2574 ntBASIC15.52■□□□□ 0.08
Chd1P40201 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Chd1P40201 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Chd1P40201 Tpmt-201ENSMUST00000021806 2708 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Chd1P40201 Slc19a1-201ENSMUST00000105410 2347 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Chd1P40201 Pramef12-201ENSMUST00000030326 2460 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Chd1P40201 Mmab-201ENSMUST00000031560 3020 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 80.2 ms