Protein–RNA interactions for Protein: O70477

Pknox1, Homeobox protein PKNOX1, mousemouse

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pknox1O70477 AI854703-202ENSMUST00000154570 3806 ntAPPRIS P1 TSL 2 BASIC10.48□□□□□ -0.73
Pknox1O70477 Bpifb9b-201ENSMUST00000088921 2067 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Pknox1O70477 Gm31718-201ENSMUST00000212406 1646 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Pknox1O70477 Slc25a12-206ENSMUST00000151937 6351 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Pknox1O70477 Itih3-205ENSMUST00000227995 2100 ntAPPRIS ALT2 BASIC10.48□□□□□ -0.73
Pknox1O70477 Erbb3-201ENSMUST00000082059 6016 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Pknox1O70477 Cxcr2-201ENSMUST00000027372 2220 ntAPPRIS P1 TSL 5 BASIC10.48□□□□□ -0.73
Pknox1O70477 Cckar-202ENSMUST00000200691 3230 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Pknox1O70477 Slc35b3-202ENSMUST00000167513 1778 ntAPPRIS P3 TSL 1 (best) BASIC10.48□□□□□ -0.73
Pknox1O70477 Bex3-203ENSMUST00000113113 766 ntAPPRIS P3 TSL 1 (best) BASIC10.48□□□□□ -0.73
Pknox1O70477 Odf4-202ENSMUST00000125134 646 ntTSL 3 BASIC10.48□□□□□ -0.73
Pknox1O70477 Gm21972-201ENSMUST00000135197 776 ntAPPRIS P1 TSL 3 BASIC10.48□□□□□ -0.73
Pknox1O70477 Tmem255b-202ENSMUST00000167505 1219 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Pknox1O70477 Gm16894-201ENSMUST00000181756 842 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Pknox1O70477 Gm8918-201ENSMUST00000190587 1087 ntBASIC10.48□□□□□ -0.73
Pknox1O70477 Gm43138-201ENSMUST00000199123 708 ntBASIC10.48□□□□□ -0.73
Pknox1O70477 Gm45592-201ENSMUST00000209605 1043 ntBASIC10.48□□□□□ -0.73
Pknox1O70477 AC164573.1-201ENSMUST00000218616 963 ntTSL 5 BASIC10.48□□□□□ -0.73
Pknox1O70477 Olfr284-201ENSMUST00000063289 918 ntAPPRIS P1 BASIC10.48□□□□□ -0.73
Pknox1O70477 Mrgpra4-201ENSMUST00000087092 1259 ntAPPRIS P1 BASIC10.48□□□□□ -0.73
Pknox1O70477 Gm6040-201ENSMUST00000095430 857 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Pknox1O70477 Slitrk1-201ENSMUST00000100322 5359 ntAPPRIS P1 BASIC10.48□□□□□ -0.73
Pknox1O70477 Akap12-202ENSMUST00000215696 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Pknox1O70477 Parp1-201ENSMUST00000027777 3873 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Pknox1O70477 9130019O22Rik-201ENSMUST00000049052 3878 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Pknox1O70477 Prdm16-203ENSMUST00000097759 8544 ntAPPRIS ALT2 TSL 5 BASIC10.48□□□□□ -0.73
Pknox1O70477 Mrps23-201ENSMUST00000024486 1332 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Pknox1O70477 Otog-201ENSMUST00000164538 10043 ntAPPRIS P1 TSL 5 BASIC10.48□□□□□ -0.73
Pknox1O70477 Abcc4-201ENSMUST00000036554 5715 ntAPPRIS P3 TSL 1 (best) BASIC10.48□□□□□ -0.73
Pknox1O70477 Prnd-201ENSMUST00000110169 1918 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Pknox1O70477 Ceacam9-201ENSMUST00000001984 1396 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Pknox1O70477 Gm43081-201ENSMUST00000199082 1380 ntBASIC10.48□□□□□ -0.73
Pknox1O70477 Nrp2-202ENSMUST00000063594 6342 ntAPPRIS P4 TSL 1 (best) BASIC10.48□□□□□ -0.73
Pknox1O70477 Zfp474-201ENSMUST00000072666 1930 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Pknox1O70477 Sik2-206ENSMUST00000176824 5369 ntAPPRIS ALT2 TSL 5 BASIC10.48□□□□□ -0.73
Pknox1O70477 Ccdc33-204ENSMUST00000119665 2552 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Pknox1O70477 Fubp1-201ENSMUST00000106121 4525 ntAPPRIS P2 TSL 2 BASIC10.48□□□□□ -0.73
Pknox1O70477 Cd177-201ENSMUST00000063956 2714 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Pknox1O70477 Ano1-202ENSMUST00000118556 4566 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Pknox1O70477 Dgcr2-201ENSMUST00000012152 4045 ntAPPRIS P3 TSL 1 (best) BASIC10.48□□□□□ -0.73
Pknox1O70477 Acer2-202ENSMUST00000084433 4060 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Pknox1O70477 C2cd5-204ENSMUST00000203187 3494 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Pknox1O70477 Scnn1a-201ENSMUST00000081440 3499 ntAPPRIS P2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Pknox1O70477 4631405J19Rik-202ENSMUST00000111270 2909 ntTSL 2 BASIC10.47□□□□□ -0.73
Pknox1O70477 Tmprss11c-201ENSMUST00000059424 1615 ntAPPRIS P2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Pknox1O70477 AC113282.5-201ENSMUST00000224330 1679 ntAPPRIS P1 BASIC10.47□□□□□ -0.73
Pknox1O70477 Clock-201ENSMUST00000075159 7478 ntAPPRIS P3 TSL 1 (best) BASIC10.47□□□□□ -0.73
Pknox1O70477 Nop2-201ENSMUST00000044200 2597 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Pknox1O70477 Cyp2g1-201ENSMUST00000040944 1896 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Pknox1O70477 Hivep1-201ENSMUST00000060148 8753 ntAPPRIS P1 TSL 5 BASIC10.47□□□□□ -0.73
Pknox1O70477 D030028A08Rik-202ENSMUST00000131501 3542 ntTSL 2 BASIC10.47□□□□□ -0.73
Pknox1O70477 Zfp7-201ENSMUST00000023179 2769 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Pknox1O70477 Apobr-201ENSMUST00000039522 3685 ntAPPRIS P2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Pknox1O70477 Tchhl1-201ENSMUST00000029516 2066 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Pknox1O70477 Vsir-202ENSMUST00000105459 1290 ntTSL 5 BASIC10.47□□□□□ -0.73
Pknox1O70477 Acrbp-204ENSMUST00000112413 672 ntTSL 2 BASIC10.47□□□□□ -0.73
Pknox1O70477 Rhox2-ps-201ENSMUST00000117421 322 ntBASIC10.47□□□□□ -0.73
Pknox1O70477 Gm11451-201ENSMUST00000118946 630 ntBASIC10.47□□□□□ -0.73
Pknox1O70477 Gm13117-201ENSMUST00000120894 691 ntBASIC10.47□□□□□ -0.73
Pknox1O70477 Platr12-201ENSMUST00000141027 462 ntTSL 3 BASIC10.47□□□□□ -0.73
Pknox1O70477 Gm15523-201ENSMUST00000160463 439 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Pknox1O70477 Gm19412-201ENSMUST00000185388 436 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Pknox1O70477 4930447C11Rik-201ENSMUST00000204503 928 ntBASIC10.47□□□□□ -0.73
Pknox1O70477 AC165249.1-202ENSMUST00000217990 734 ntTSL 3 BASIC10.47□□□□□ -0.73
Pknox1O70477 CT030011.1-201ENSMUST00000221959 264 ntTSL 5 BASIC10.47□□□□□ -0.73
Pknox1O70477 AC136376.2-201ENSMUST00000228819 490 ntBASIC10.47□□□□□ -0.73
Pknox1O70477 Supt20-201ENSMUST00000029315 2112 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Pknox1O70477 Stra6-201ENSMUST00000034880 2993 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Pknox1O70477 Cmbl-201ENSMUST00000070918 1155 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Pknox1O70477 Gm26737-201ENSMUST00000181106 2151 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Pknox1O70477 Ptk2b-202ENSMUST00000089250 3903 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Pknox1O70477 Ralgapb-202ENSMUST00000109485 6709 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Pknox1O70477 Slc45a3-202ENSMUST00000177943 3212 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Pknox1O70477 Slc7a3-202ENSMUST00000101362 2371 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Pknox1O70477 Cfap74-204ENSMUST00000123952 2365 ntAPPRIS P2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Pknox1O70477 Gm44056-201ENSMUST00000204623 1427 ntBASIC10.47□□□□□ -0.73
Pknox1O70477 Impdh2-ps-201ENSMUST00000120826 1545 ntBASIC10.47□□□□□ -0.73
Pknox1O70477 Gm40557-201ENSMUST00000220782 2736 ntTSL 5 BASIC10.47□□□□□ -0.73
Pknox1O70477 Anks1b-203ENSMUST00000099368 2799 ntTSL 5 BASIC10.47□□□□□ -0.73
Pknox1O70477 Rep15-201ENSMUST00000036194 1662 ntAPPRIS P1 BASIC10.47□□□□□ -0.73
Pknox1O70477 Phf20-ps-201ENSMUST00000185066 2886 ntBASIC10.47□□□□□ -0.73
Pknox1O70477 Il17ra-201ENSMUST00000002976 7752 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Pknox1O70477 AC153370.2-201ENSMUST00000217920 3093 ntTSL 5 BASIC10.47□□□□□ -0.73
Pknox1O70477 N4bp2l1-205ENSMUST00000202031 1864 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Pknox1O70477 Edn1-201ENSMUST00000021796 2139 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Pknox1O70477 Epb41l5-202ENSMUST00000052404 6442 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
Pknox1O70477 Tcaf1-202ENSMUST00000045140 5256 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Pknox1O70477 Cul2-206ENSMUST00000162301 3828 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Pknox1O70477 Olfr315-202ENSMUST00000203256 2458 ntAPPRIS P1 TSL 3 BASIC10.46□□□□□ -0.73
Pknox1O70477 Pde2a-204ENSMUST00000209537 4100 ntAPPRIS ALT2 TSL 1 (best) BASIC10.46□□□□□ -0.73
Pknox1O70477 Myo18a-223ENSMUST00000169105 6475 ntAPPRIS ALT2 TSL 1 (best) BASIC10.46□□□□□ -0.73
Pknox1O70477 Eef2k-204ENSMUST00000106489 3047 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Pknox1O70477 Fam186a-202ENSMUST00000100209 9334 ntAPPRIS ALT2 TSL 5 BASIC10.46□□□□□ -0.73
Pknox1O70477 Snd1-201ENSMUST00000001460 3482 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Pknox1O70477 Btbd7-206ENSMUST00000223554 8157 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Pknox1O70477 Atl2-201ENSMUST00000068282 3618 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Pknox1O70477 Ralyl-202ENSMUST00000108373 267 ntTSL 5 BASIC10.46□□□□□ -0.73
Pknox1O70477 Gm15285-201ENSMUST00000119271 473 ntBASIC10.46□□□□□ -0.73
Pknox1O70477 Gm13791-201ENSMUST00000123263 608 ntTSL 3 BASIC10.46□□□□□ -0.73
Pknox1O70477 Gm14266-202ENSMUST00000146542 1067 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
Retrieved 100 of 76,532 protein–RNA pairs in 65.9 ms