Protein–RNA interactions for Protein: F6SEU4

Syngap1, Ras/Rap GTPase-activating protein SynGAP, mousemouse

Predictions only

Length 1,340 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syngap1F6SEU4 Ighv13-1-201ENSMUST00000103480 294 ntBASIC12□□□□□ -0.49
Syngap1F6SEU4 Lyrm1-202ENSMUST00000106516 1069 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Syngap1F6SEU4 E030025P04Rik-201ENSMUST00000106710 1078 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Syngap1F6SEU4 Scgb1b29-201ENSMUST00000108094 282 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Syngap1F6SEU4 Camk2a-204ENSMUST00000115295 979 ntTSL 1 (best) BASIC12□□□□□ -0.49
Syngap1F6SEU4 Gm7928-201ENSMUST00000181249 701 ntBASIC12□□□□□ -0.49
Syngap1F6SEU4 Gm18299-201ENSMUST00000192026 636 ntBASIC12□□□□□ -0.49
Syngap1F6SEU4 Gm36980-201ENSMUST00000195643 622 ntBASIC12□□□□□ -0.49
Syngap1F6SEU4 Gm44540-201ENSMUST00000205640 354 ntBASIC12□□□□□ -0.49
Syngap1F6SEU4 Zfp787-203ENSMUST00000207331 376 ntTSL 1 (best) BASIC12□□□□□ -0.49
Syngap1F6SEU4 Gm39147-202ENSMUST00000211730 882 ntTSL 5 BASIC12□□□□□ -0.49
Syngap1F6SEU4 Gm34397-201ENSMUST00000213192 708 ntTSL 3 BASIC12□□□□□ -0.49
Syngap1F6SEU4 Gm40689-201ENSMUST00000218006 362 ntTSL 5 BASIC12□□□□□ -0.49
Syngap1F6SEU4 Gm8960-201ENSMUST00000219787 788 ntBASIC12□□□□□ -0.49
Syngap1F6SEU4 Galp-201ENSMUST00000037553 650 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Syngap1F6SEU4 Olfr1535-201ENSMUST00000068163 981 ntAPPRIS P1 BASIC12□□□□□ -0.49
Syngap1F6SEU4 Taar5-201ENSMUST00000092659 1014 ntAPPRIS P1 BASIC12□□□□□ -0.49
Syngap1F6SEU4 Cpt1c-201ENSMUST00000063761 2793 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Syngap1F6SEU4 Ugt1a7c-201ENSMUST00000058237 3231 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Syngap1F6SEU4 Kcnmb3-201ENSMUST00000164954 1715 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Syngap1F6SEU4 Slc10a1-202ENSMUST00000218162 1749 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Syngap1F6SEU4 Wdr13-201ENSMUST00000033506 4183 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Syngap1F6SEU4 Gm44663-201ENSMUST00000206898 3150 ntBASIC12□□□□□ -0.49
Syngap1F6SEU4 Gtf3c1-204ENSMUST00000205659 6570 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Syngap1F6SEU4 Pck1-201ENSMUST00000029017 2661 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Syngap1F6SEU4 Gm13135-201ENSMUST00000117628 3121 ntBASIC12□□□□□ -0.49
Syngap1F6SEU4 Gm26640-201ENSMUST00000180809 3524 ntTSL 1 (best) BASIC12□□□□□ -0.49
Syngap1F6SEU4 Satb1-208ENSMUST00000144331 6243 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Syngap1F6SEU4 Cd55-201ENSMUST00000027650 2533 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Syngap1F6SEU4 Cad-211ENSMUST00000202795 6559 ntTSL 1 (best) BASIC12□□□□□ -0.49
Syngap1F6SEU4 Cntn4-203ENSMUST00000113258 2464 ntTSL 1 (best) BASIC12□□□□□ -0.49
Syngap1F6SEU4 Triml2-202ENSMUST00000209200 1519 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Syngap1F6SEU4 Supt3-201ENSMUST00000050630 1508 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Syngap1F6SEU4 6030443J06Rik-201ENSMUST00000181209 2380 ntTSL 1 (best) BASIC12□□□□□ -0.49
Syngap1F6SEU4 C2cd5-213ENSMUST00000204655 3526 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Syngap1F6SEU4 Slc2a10-201ENSMUST00000029196 3544 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Syngap1F6SEU4 Gm35963-201ENSMUST00000211762 1425 ntTSL 5 BASIC11.99□□□□□ -0.49
Syngap1F6SEU4 Wars-204ENSMUST00000161154 1824 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Syngap1F6SEU4 Trip4-202ENSMUST00000119245 4211 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Syngap1F6SEU4 Rpap2-202ENSMUST00000112650 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Syngap1F6SEU4 Mknk1-202ENSMUST00000106513 2552 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Syngap1F6SEU4 4930402K13Rik-201ENSMUST00000059967 1781 ntAPPRIS P1 BASIC11.99□□□□□ -0.49
Syngap1F6SEU4 Slc36a1-203ENSMUST00000108872 5264 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Syngap1F6SEU4 Mpl-202ENSMUST00000102671 2934 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Syngap1F6SEU4 Mmel1-202ENSMUST00000080559 2926 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Syngap1F6SEU4 Dennd1c-201ENSMUST00000011623 2520 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Syngap1F6SEU4 Ptprr-206ENSMUST00000148731 2511 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Syngap1F6SEU4 Dnali1-201ENSMUST00000036383 2133 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Syngap1F6SEU4 Gm4419-201ENSMUST00000180671 1729 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Syngap1F6SEU4 Nacc2-202ENSMUST00000114159 6675 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Syngap1F6SEU4 Gm5159-201ENSMUST00000212733 1652 ntBASIC11.99□□□□□ -0.49
Syngap1F6SEU4 Bpifb1-202ENSMUST00000081816 1699 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Syngap1F6SEU4 Igtp-201ENSMUST00000035266 2022 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Syngap1F6SEU4 Nxpe5-204ENSMUST00000161047 2379 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Syngap1F6SEU4 Mrps23-202ENSMUST00000107915 332 ntTSL 5 BASIC11.99□□□□□ -0.49
Syngap1F6SEU4 Ncbp2-202ENSMUST00000115178 515 ntTSL 5 BASIC11.99□□□□□ -0.49
Syngap1F6SEU4 Ccl19-ps1-201ENSMUST00000119621 327 ntBASIC11.99□□□□□ -0.49
Syngap1F6SEU4 AU015836-201ENSMUST00000120624 674 ntTSL 3 BASIC11.99□□□□□ -0.49
Syngap1F6SEU4 Vmn1r-ps104-201ENSMUST00000120960 771 ntBASIC11.99□□□□□ -0.49
Syngap1F6SEU4 Gm15866-202ENSMUST00000152116 914 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Syngap1F6SEU4 Gm15664-201ENSMUST00000160167 184 ntBASIC11.99□□□□□ -0.49
Syngap1F6SEU4 Pttg1ip-208ENSMUST00000162943 721 ntAPPRIS ALT2 TSL 3 BASIC11.99□□□□□ -0.49
Syngap1F6SEU4 Gm26906-201ENSMUST00000180523 1228 ntTSL 5 BASIC11.99□□□□□ -0.49
Syngap1F6SEU4 Gm26931-201ENSMUST00000182273 609 ntBASIC11.99□□□□□ -0.49
Syngap1F6SEU4 Gm42133-201ENSMUST00000196076 637 ntTSL 3 BASIC11.99□□□□□ -0.49
Syngap1F6SEU4 Gm44498-201ENSMUST00000199509 111 ntBASIC11.99□□□□□ -0.49
Syngap1F6SEU4 Gm44420-201ENSMUST00000203669 490 ntBASIC11.99□□□□□ -0.49
Syngap1F6SEU4 Gm35611-201ENSMUST00000205323 799 ntTSL 3 BASIC11.99□□□□□ -0.49
Syngap1F6SEU4 Gm18466-201ENSMUST00000209147 499 ntBASIC11.99□□□□□ -0.49
Syngap1F6SEU4 Gm45258-201ENSMUST00000210042 853 ntBASIC11.99□□□□□ -0.49
Syngap1F6SEU4 Ormdl2-203ENSMUST00000219215 1051 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Syngap1F6SEU4 Mptx1-201ENSMUST00000027816 799 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Syngap1F6SEU4 Mcu-201ENSMUST00000009791 1079 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Syngap1F6SEU4 Slc9a8-201ENSMUST00000047815 4521 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Syngap1F6SEU4 Lrba-202ENSMUST00000192145 8843 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Syngap1F6SEU4 Fkbp15-203ENSMUST00000098033 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Syngap1F6SEU4 Bach1-201ENSMUST00000026703 5867 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Syngap1F6SEU4 Pip5k1a-205ENSMUST00000107233 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Syngap1F6SEU4 Kcnk10-201ENSMUST00000110113 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Syngap1F6SEU4 Tnc-201ENSMUST00000030056 6833 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Syngap1F6SEU4 Edc4-202ENSMUST00000119261 4645 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Syngap1F6SEU4 Lrrc55-201ENSMUST00000099930 2217 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Syngap1F6SEU4 Ikbkg-204ENSMUST00000114128 1867 ntAPPRIS ALT2 TSL 2 BASIC11.99□□□□□ -0.49
Syngap1F6SEU4 Ece1-201ENSMUST00000102518 4816 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Syngap1F6SEU4 Bcl2l2-203ENSMUST00000133397 3813 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Syngap1F6SEU4 Tspear-201ENSMUST00000092366 2446 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Syngap1F6SEU4 U2af1l4-237ENSMUST00000167042 3007 ntAPPRIS P5 TSL 2 BASIC11.99□□□□□ -0.49
Syngap1F6SEU4 Dnmt3a-218ENSMUST00000174817 8737 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Syngap1F6SEU4 Gm8873-201ENSMUST00000217847 1439 ntBASIC11.98□□□□□ -0.49
Syngap1F6SEU4 Hdc-201ENSMUST00000028838 2392 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Syngap1F6SEU4 G6pdx-201ENSMUST00000004327 2652 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Syngap1F6SEU4 Cacna1s-204ENSMUST00000160641 6104 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Syngap1F6SEU4 Glb1l-201ENSMUST00000113623 2339 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Syngap1F6SEU4 Pcdhb14-201ENSMUST00000052387 8695 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
Syngap1F6SEU4 CT010480.4-201ENSMUST00000224654 2283 ntBASIC11.98□□□□□ -0.49
Syngap1F6SEU4 Ighg2b-202ENSMUST00000192188 2566 ntAPPRIS P5 BASIC11.98□□□□□ -0.49
Syngap1F6SEU4 Trim55-201ENSMUST00000029139 2595 ntAPPRIS P1 TSL 2 BASIC11.98□□□□□ -0.49
Syngap1F6SEU4 Prrx1-201ENSMUST00000027878 4952 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Syngap1F6SEU4 Klhl14-201ENSMUST00000049105 4018 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Syngap1F6SEU4 Eif3d-201ENSMUST00000100484 1910 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 42.2 ms