Protein–RNA interactions for Protein: Q5SPW0

Vps54, Vacuolar protein sorting-associated protein 54, mousemouse

Predictions only

Length 977 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps54Q5SPW0 Gm14222-201ENSMUST00000128681 575 ntTSL 2 BASIC12.72□□□□□ -0.37
Vps54Q5SPW0 Gm15912-201ENSMUST00000128914 578 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Vps54Q5SPW0 Gm11634-201ENSMUST00000154147 755 ntAPPRIS ALT2 TSL 3 BASIC12.72□□□□□ -0.37
Vps54Q5SPW0 Fxyd5-209ENSMUST00000162087 762 ntAPPRIS P3 TSL 3 BASIC12.72□□□□□ -0.37
Vps54Q5SPW0 Gm29200-201ENSMUST00000188118 1085 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Vps54Q5SPW0 Gm29083-201ENSMUST00000189205 733 ntTSL 3 BASIC12.72□□□□□ -0.37
Vps54Q5SPW0 Tmbim7-204ENSMUST00000198739 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Vps54Q5SPW0 Mrpl23-206ENSMUST00000210662 736 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Vps54Q5SPW0 Zmiz1os1-202ENSMUST00000225188 1223 ntBASIC12.72□□□□□ -0.37
Vps54Q5SPW0 Elob-201ENSMUST00000069579 508 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Vps54Q5SPW0 Rps3a2-201ENSMUST00000074245 792 ntBASIC12.72□□□□□ -0.37
Vps54Q5SPW0 Gm10238-201ENSMUST00000089689 408 ntBASIC12.72□□□□□ -0.37
Vps54Q5SPW0 Acadsb-202ENSMUST00000117518 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Vps54Q5SPW0 Vps18-201ENSMUST00000037280 4054 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Vps54Q5SPW0 Tmem39a-204ENSMUST00000163884 1645 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Vps54Q5SPW0 Timm22-201ENSMUST00000021203 2817 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Vps54Q5SPW0 Pygl-201ENSMUST00000071250 2825 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Vps54Q5SPW0 Vbp1-201ENSMUST00000033540 1595 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Vps54Q5SPW0 Cit-202ENSMUST00000102560 6213 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Vps54Q5SPW0 Gm42706-201ENSMUST00000199733 1910 ntBASIC12.72□□□□□ -0.37
Vps54Q5SPW0 Zfp474-201ENSMUST00000072666 1930 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Vps54Q5SPW0 Gm26637-201ENSMUST00000180880 2289 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Vps54Q5SPW0 Arnt2-213ENSMUST00000209133 6228 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Vps54Q5SPW0 Smc4-202ENSMUST00000107803 3983 ntTSL 5 BASIC12.71□□□□□ -0.37
Vps54Q5SPW0 Tfip11-201ENSMUST00000031288 3560 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Vps54Q5SPW0 Brsk2-216ENSMUST00000174499 4223 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
Vps54Q5SPW0 AC242690.1-202ENSMUST00000214616 1742 ntTSL 5 BASIC12.71□□□□□ -0.37
Vps54Q5SPW0 Tial1-202ENSMUST00000106226 4451 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
Vps54Q5SPW0 Gm12992-201ENSMUST00000124738 4493 ntTSL 5 BASIC12.71□□□□□ -0.37
Vps54Q5SPW0 Gm44975-201ENSMUST00000207435 1390 ntBASIC12.71□□□□□ -0.37
Vps54Q5SPW0 Nos3-201ENSMUST00000030834 4132 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Vps54Q5SPW0 Pla2g4c-201ENSMUST00000043612 3382 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
Vps54Q5SPW0 Rcbtb2-219ENSMUST00000169513 3622 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Vps54Q5SPW0 Nampt-201ENSMUST00000020886 4527 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Vps54Q5SPW0 Gm23745-201ENSMUST00000104230 125 ntBASIC12.71□□□□□ -0.37
Vps54Q5SPW0 Ccr6-204ENSMUST00000167956 1219 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Vps54Q5SPW0 Gm25872-201ENSMUST00000177784 100 ntBASIC12.71□□□□□ -0.37
Vps54Q5SPW0 Tex35-206ENSMUST00000187546 856 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
Vps54Q5SPW0 Gm7539-201ENSMUST00000189789 630 ntBASIC12.71□□□□□ -0.37
Vps54Q5SPW0 Gm20186-201ENSMUST00000201775 737 ntTSL 3 BASIC12.71□□□□□ -0.37
Vps54Q5SPW0 Chac2-201ENSMUST00000020553 1018 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Vps54Q5SPW0 Gm45308-201ENSMUST00000210610 415 ntBASIC12.71□□□□□ -0.37
Vps54Q5SPW0 BC106175-202ENSMUST00000219344 1213 ntBASIC12.71□□□□□ -0.37
Vps54Q5SPW0 Gm32296-201ENSMUST00000220590 1057 ntTSL 3 BASIC12.71□□□□□ -0.37
Vps54Q5SPW0 Gm3791-201ENSMUST00000220790 768 ntBASIC12.71□□□□□ -0.37
Vps54Q5SPW0 1700047G03Rik-205ENSMUST00000227822 1048 ntBASIC12.71□□□□□ -0.37
Vps54Q5SPW0 Prss51-201ENSMUST00000063785 961 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Vps54Q5SPW0 BC049762-202ENSMUST00000065950 883 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Vps54Q5SPW0 Ccl27a-201ENSMUST00000074387 405 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
Vps54Q5SPW0 Olfr169-201ENSMUST00000090062 942 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
Vps54Q5SPW0 Gm8325-201ENSMUST00000099086 453 ntBASIC12.71□□□□□ -0.37
Vps54Q5SPW0 Zeb2-212ENSMUST00000176438 9124 ntAPPRIS P2 TSL 5 BASIC12.71□□□□□ -0.37
Vps54Q5SPW0 Kbtbd12-206ENSMUST00000184878 3351 ntTSL 5 BASIC12.71□□□□□ -0.38
Vps54Q5SPW0 Gm43625-201ENSMUST00000199177 1539 ntBASIC12.71□□□□□ -0.38
Vps54Q5SPW0 Gm10646-201ENSMUST00000213227 3293 ntTSL 2 BASIC12.71□□□□□ -0.38
Vps54Q5SPW0 Rtn4ip1-202ENSMUST00000105492 2059 ntTSL 3 BASIC12.71□□□□□ -0.38
Vps54Q5SPW0 Ttll5-202ENSMUST00000040273 4147 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.38
Vps54Q5SPW0 Phf24-202ENSMUST00000107975 6494 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.38
Vps54Q5SPW0 Phf20-ps-201ENSMUST00000185066 2886 ntBASIC12.71□□□□□ -0.38
Vps54Q5SPW0 Gm13120-201ENSMUST00000117343 1446 ntBASIC12.71□□□□□ -0.38
Vps54Q5SPW0 AC125351.1-201ENSMUST00000221438 2223 ntBASIC12.7□□□□□ -0.38
Vps54Q5SPW0 Ankrd36-201ENSMUST00000109855 1363 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Vps54Q5SPW0 Avil-201ENSMUST00000026500 3033 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Vps54Q5SPW0 Cdnf-201ENSMUST00000036350 3013 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Vps54Q5SPW0 Jaml-201ENSMUST00000050020 2461 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Vps54Q5SPW0 Asb7-202ENSMUST00000124899 4928 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Vps54Q5SPW0 Lep-201ENSMUST00000069789 3259 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Vps54Q5SPW0 Prr27-202ENSMUST00000101056 1337 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Vps54Q5SPW0 Prr27-201ENSMUST00000002310 1313 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Vps54Q5SPW0 Mpp1-202ENSMUST00000114091 1558 ntTSL 2 BASIC12.7□□□□□ -0.38
Vps54Q5SPW0 Cacna1s-202ENSMUST00000112068 6018 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Vps54Q5SPW0 Rnf20-201ENSMUST00000029989 4154 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Vps54Q5SPW0 Toe1-201ENSMUST00000030451 2090 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Vps54Q5SPW0 Pdzk1ip1-202ENSMUST00000106548 887 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Vps54Q5SPW0 Pxmp4-202ENSMUST00000109703 560 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Vps54Q5SPW0 Gm15982-201ENSMUST00000121681 554 ntBASIC12.7□□□□□ -0.38
Vps54Q5SPW0 Gm15287-201ENSMUST00000132564 751 ntTSL 2 BASIC12.7□□□□□ -0.38
Vps54Q5SPW0 Gm11981-201ENSMUST00000139769 664 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Vps54Q5SPW0 Gm16235-202ENSMUST00000149562 206 ntTSL 3 BASIC12.7□□□□□ -0.38
Vps54Q5SPW0 Gm6686-201ENSMUST00000178455 258 ntBASIC12.7□□□□□ -0.38
Vps54Q5SPW0 H2al1e-201ENSMUST00000178979 494 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
Vps54Q5SPW0 Gm8601-201ENSMUST00000182096 909 ntBASIC12.7□□□□□ -0.38
Vps54Q5SPW0 Gm27316-201ENSMUST00000184884 277 ntBASIC12.7□□□□□ -0.38
Vps54Q5SPW0 H2al1b-201ENSMUST00000189531 495 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
Vps54Q5SPW0 Gm6606-201ENSMUST00000193613 947 ntBASIC12.7□□□□□ -0.38
Vps54Q5SPW0 Gm42493-201ENSMUST00000197559 1121 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Vps54Q5SPW0 Gm3527-201ENSMUST00000198905 460 ntBASIC12.7□□□□□ -0.38
Vps54Q5SPW0 Lsm8-204ENSMUST00000201141 503 ntTSL 3 BASIC12.7□□□□□ -0.38
Vps54Q5SPW0 Gm7939-201ENSMUST00000201233 1050 ntBASIC12.7□□□□□ -0.38
Vps54Q5SPW0 BC080696-201ENSMUST00000202858 1218 ntBASIC12.7□□□□□ -0.38
Vps54Q5SPW0 Gm45363-201ENSMUST00000210196 1294 ntBASIC12.7□□□□□ -0.38
Vps54Q5SPW0 Gm45542-201ENSMUST00000210456 438 ntTSL 2 BASIC12.7□□□□□ -0.38
Vps54Q5SPW0 Gpr137b-ps-202ENSMUST00000220647 1159 ntBASIC12.7□□□□□ -0.38
Vps54Q5SPW0 Gm3926-201ENSMUST00000223378 1123 ntBASIC12.7□□□□□ -0.38
Vps54Q5SPW0 AC174797.2-201ENSMUST00000225835 165 ntBASIC12.7□□□□□ -0.38
Vps54Q5SPW0 AC141884.2-201ENSMUST00000228811 775 ntBASIC12.7□□□□□ -0.38
Vps54Q5SPW0 4933407L21Rik-201ENSMUST00000027426 1146 ntAPPRIS P5 TSL 1 (best) BASIC12.7□□□□□ -0.38
Vps54Q5SPW0 Olfr372-201ENSMUST00000093434 1016 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
Vps54Q5SPW0 Olfr1313-201ENSMUST00000099599 938 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
Vps54Q5SPW0 Hsd3b3-204ENSMUST00000107019 1533 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 46.9 ms