Protein–RNA interactions for Protein: Q3UHA3

Spg11, Spatacsin, mousemouse

Predictions only

Length 2,430 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Spg11Q3UHA3 C1qtnf1-202ENSMUST00000106286 2512 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Spg11Q3UHA3 C1qtnf1-201ENSMUST00000017590 2532 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Spg11Q3UHA3 Adat1-203ENSMUST00000139820 2762 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Spg11Q3UHA3 Map7-202ENSMUST00000116259 3831 ntAPPRIS P2 TSL 1 (best) BASIC9.76□□□□□ -0.85
Spg11Q3UHA3 Anxa11os-201ENSMUST00000184083 2479 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Spg11Q3UHA3 Gm8122-201ENSMUST00000165988 1404 ntAPPRIS P1 TSL 5 BASIC9.76□□□□□ -0.85
Spg11Q3UHA3 Gng5-202ENSMUST00000118280 2419 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Spg11Q3UHA3 Ccpg1-208ENSMUST00000150826 2939 ntAPPRIS ALT2 TSL 1 (best) BASIC9.76□□□□□ -0.85
Spg11Q3UHA3 Kpna1-201ENSMUST00000004054 5039 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Spg11Q3UHA3 Ywhaz-201ENSMUST00000022894 3288 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Spg11Q3UHA3 Tepsin-201ENSMUST00000026442 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC9.76□□□□□ -0.85
Spg11Q3UHA3 Gm43340-201ENSMUST00000200448 1344 ntBASIC9.76□□□□□ -0.85
Spg11Q3UHA3 Brwd1-202ENSMUST00000099502 8547 ntAPPRIS P2 TSL 1 (best) BASIC9.76□□□□□ -0.85
Spg11Q3UHA3 Gm42521-201ENSMUST00000199190 2040 ntBASIC9.76□□□□□ -0.85
Spg11Q3UHA3 Mgat1-203ENSMUST00000109194 2480 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Spg11Q3UHA3 Anapc4-201ENSMUST00000031072 3854 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Spg11Q3UHA3 Pcgf5-202ENSMUST00000071267 1508 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Spg11Q3UHA3 Gm38194-201ENSMUST00000194529 2211 ntBASIC9.76□□□□□ -0.85
Spg11Q3UHA3 Mcm2-201ENSMUST00000058011 3371 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Spg11Q3UHA3 Alg13-203ENSMUST00000123710 604 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Spg11Q3UHA3 Gm15416-201ENSMUST00000131080 442 ntTSL 3 BASIC9.76□□□□□ -0.85
Spg11Q3UHA3 1700049E15Rik-202ENSMUST00000152737 921 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Spg11Q3UHA3 Gm26208-201ENSMUST00000158677 124 ntBASIC9.76□□□□□ -0.85
Spg11Q3UHA3 Mir6354-201ENSMUST00000184979 116 ntBASIC9.76□□□□□ -0.85
Spg11Q3UHA3 Ngf-204ENSMUST00000198644 1120 ntTSL 5 BASIC9.76□□□□□ -0.85
Spg11Q3UHA3 Pf4-203ENSMUST00000202625 411 ntTSL 2 BASIC9.76□□□□□ -0.85
Spg11Q3UHA3 Rpl19-ps2-201ENSMUST00000219540 590 ntBASIC9.76□□□□□ -0.85
Spg11Q3UHA3 Kif16b-201ENSMUST00000043589 6383 ntAPPRIS P1 TSL 2 BASIC9.76□□□□□ -0.85
Spg11Q3UHA3 n-R5s25-201ENSMUST00000082923 119 ntBASIC9.76□□□□□ -0.85
Spg11Q3UHA3 Rnf44-217ENSMUST00000150806 3772 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Spg11Q3UHA3 Osbpl7-201ENSMUST00000090020 3771 ntAPPRIS P2 TSL 1 (best) BASIC9.76□□□□□ -0.85
Spg11Q3UHA3 Abcf3-201ENSMUST00000003319 3090 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Spg11Q3UHA3 Msln-201ENSMUST00000075884 2114 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Spg11Q3UHA3 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Spg11Q3UHA3 Afdn-216ENSMUST00000170827 7338 ntAPPRIS ALT2 TSL 5 BASIC9.76□□□□□ -0.85
Spg11Q3UHA3 Lhx9-204ENSMUST00000112026 2065 ntAPPRIS P2 TSL 1 (best) BASIC9.76□□□□□ -0.85
Spg11Q3UHA3 Wars-204ENSMUST00000161154 1824 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Spg11Q3UHA3 Mapk8ip3-204ENSMUST00000117509 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC9.76□□□□□ -0.85
Spg11Q3UHA3 Cacnb2-203ENSMUST00000114723 3945 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Spg11Q3UHA3 Mfap3l-203ENSMUST00000161421 4142 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Spg11Q3UHA3 Chrdl1-202ENSMUST00000074660 4096 ntAPPRIS P3 TSL 1 (best) BASIC9.76□□□□□ -0.85
Spg11Q3UHA3 Cpa5-202ENSMUST00000115138 1778 ntTSL 5 BASIC9.76□□□□□ -0.85
Spg11Q3UHA3 Gba-201ENSMUST00000077367 1779 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Spg11Q3UHA3 Ap1m2-202ENSMUST00000115433 2586 ntAPPRIS ALT1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Spg11Q3UHA3 Gm10531-201ENSMUST00000193527 2303 ntBASIC9.75□□□□□ -0.85
Spg11Q3UHA3 Ngef-202ENSMUST00000068681 3109 ntAPPRIS P4 TSL 1 (best) BASIC9.75□□□□□ -0.85
Spg11Q3UHA3 Dhtkd1-202ENSMUST00000095147 5480 ntAPPRIS P1 TSL 5 BASIC9.75□□□□□ -0.85
Spg11Q3UHA3 Ppp2r2b-202ENSMUST00000117687 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Spg11Q3UHA3 Fbxo43-201ENSMUST00000058643 4035 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Spg11Q3UHA3 Gm6880-201ENSMUST00000114125 627 ntAPPRIS P1 TSL 5 BASIC9.75□□□□□ -0.85
Spg11Q3UHA3 Hsd17b13-203ENSMUST00000120320 1118 ntTSL 5 BASIC9.75□□□□□ -0.85
Spg11Q3UHA3 Gm22876-201ENSMUST00000175450 298 ntBASIC9.75□□□□□ -0.85
Spg11Q3UHA3 Gm5543-201ENSMUST00000193329 1091 ntBASIC9.75□□□□□ -0.85
Spg11Q3UHA3 Gm37016-201ENSMUST00000195507 660 ntTSL 5 BASIC9.75□□□□□ -0.85
Spg11Q3UHA3 Gm31698-201ENSMUST00000214227 430 ntTSL 2 BASIC9.75□□□□□ -0.85
Spg11Q3UHA3 Endov-201ENSMUST00000064513 954 ntTSL 5 BASIC9.75□□□□□ -0.85
Spg11Q3UHA3 Lsm11-202ENSMUST00000129820 6453 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Spg11Q3UHA3 Sema3g-201ENSMUST00000090180 4540 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Spg11Q3UHA3 Gm15083-201ENSMUST00000138670 1413 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
Spg11Q3UHA3 Stau2-202ENSMUST00000054668 2907 ntAPPRIS P1 TSL 5 BASIC9.75□□□□□ -0.85
Spg11Q3UHA3 Ints10-201ENSMUST00000034328 4201 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Spg11Q3UHA3 Galc-201ENSMUST00000021390 3832 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Spg11Q3UHA3 Gm37886-201ENSMUST00000195349 1513 ntBASIC9.75□□□□□ -0.85
Spg11Q3UHA3 Chad-201ENSMUST00000040418 1680 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Spg11Q3UHA3 Ggnbp1-203ENSMUST00000133257 5012 ntAPPRIS P3 TSL 1 (best) BASIC9.75□□□□□ -0.85
Spg11Q3UHA3 Fank1-202ENSMUST00000121560 475 ntTSL 5 BASIC9.75□□□□□ -0.85
Spg11Q3UHA3 Gm6425-201ENSMUST00000136332 790 ntBASIC9.75□□□□□ -0.85
Spg11Q3UHA3 Gm13861-201ENSMUST00000137136 495 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
Spg11Q3UHA3 Gm16973-201ENSMUST00000180682 1299 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
Spg11Q3UHA3 Gm29669-201ENSMUST00000188605 881 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
Spg11Q3UHA3 Gm17868-201ENSMUST00000192761 668 ntBASIC9.75□□□□□ -0.85
Spg11Q3UHA3 Fam162b-201ENSMUST00000020064 646 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Spg11Q3UHA3 Gm30808-201ENSMUST00000211166 845 ntTSL 5 BASIC9.75□□□□□ -0.85
Spg11Q3UHA3 Spcs1-206ENSMUST00000228736 702 ntAPPRIS P1 BASIC9.75□□□□□ -0.85
Spg11Q3UHA3 Cacng3-201ENSMUST00000084615 2777 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Spg11Q3UHA3 Sema4a-215ENSMUST00000169222 3084 ntAPPRIS P1 TSL 5 BASIC9.75□□□□□ -0.85
Spg11Q3UHA3 Cisd2-201ENSMUST00000029815 3361 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Spg11Q3UHA3 Rap1gds1-202ENSMUST00000098574 3669 ntAPPRIS P3 TSL 1 (best) BASIC9.75□□□□□ -0.85
Spg11Q3UHA3 Kif2a-202ENSMUST00000117423 2023 ntTSL 5 BASIC9.75□□□□□ -0.85
Spg11Q3UHA3 Mylk-201ENSMUST00000023538 7824 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Spg11Q3UHA3 Wisp1-201ENSMUST00000005255 5097 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Spg11Q3UHA3 Tfe3-203ENSMUST00000101695 2989 ntTSL 5 BASIC9.75□□□□□ -0.85
Spg11Q3UHA3 Tsn-201ENSMUST00000027623 7063 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Spg11Q3UHA3 Dnajc6-202ENSMUST00000094953 5322 ntAPPRIS P3 TSL 1 (best) BASIC9.75□□□□□ -0.85
Spg11Q3UHA3 Zyg11a-203ENSMUST00000223127 2283 ntAPPRIS ALT2 TSL 5 BASIC9.74□□□□□ -0.85
Spg11Q3UHA3 Abca3-201ENSMUST00000039013 6476 ntAPPRIS P2 TSL 1 (best) BASIC9.74□□□□□ -0.85
Spg11Q3UHA3 Bdh2-202ENSMUST00000120397 1172 ntTSL 5 BASIC9.74□□□□□ -0.85
Spg11Q3UHA3 Polr1c-203ENSMUST00000124655 829 ntTSL 5 BASIC9.74□□□□□ -0.85
Spg11Q3UHA3 Gm15895-201ENSMUST00000157018 731 ntTSL 3 BASIC9.74□□□□□ -0.85
Spg11Q3UHA3 Depdc1b-205ENSMUST00000171178 1404 ntAPPRIS ALT1 TSL 5 BASIC9.74□□□□□ -0.85
Spg11Q3UHA3 Gm4252-201ENSMUST00000174823 313 ntBASIC9.74□□□□□ -0.85
Spg11Q3UHA3 Ly6g6c-203ENSMUST00000174876 723 ntAPPRIS ALT2 TSL 1 (best) BASIC9.74□□□□□ -0.85
Spg11Q3UHA3 Hcst-203ENSMUST00000208740 366 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
Spg11Q3UHA3 AC124687.4-201ENSMUST00000222361 463 ntTSL 5 BASIC9.74□□□□□ -0.85
Spg11Q3UHA3 Rnf224-201ENSMUST00000091318 2021 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Spg11Q3UHA3 Src-201ENSMUST00000029175 3906 ntAPPRIS P1 TSL 5 BASIC9.74□□□□□ -0.85
Spg11Q3UHA3 Cnot10-201ENSMUST00000070117 2853 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Spg11Q3UHA3 Ces4a-201ENSMUST00000161289 2433 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Spg11Q3UHA3 Lin52-201ENSMUST00000137170 2270 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Spg11Q3UHA3 Oprd1-201ENSMUST00000056336 4021 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Retrieved 100 of 76,532 protein–RNA pairs in 45.6 ms