Protein–RNA interactions for Protein: P97496

Smarcc1, SWI/SNF complex subunit SMARCC1, mousemouse

Predictions only

Length 1,104 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcc1P97496 Abi1-211ENSMUST00000149719 3303 ntAPPRIS ALT1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Smarcc1P97496 Zfp830-201ENSMUST00000056677 1591 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Smarcc1P97496 Cd14-201ENSMUST00000061829 1572 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Smarcc1P97496 Gm45449-201ENSMUST00000211485 1960 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Smarcc1P97496 Gpr17-201ENSMUST00000064016 5195 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Smarcc1P97496 Slc25a51-202ENSMUST00000116341 4438 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Smarcc1P97496 Mindy1-202ENSMUST00000107187 2827 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Smarcc1P97496 Mindy1-201ENSMUST00000039537 2800 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Smarcc1P97496 Rab14-201ENSMUST00000028238 3081 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Smarcc1P97496 Jaml-201ENSMUST00000050020 2461 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Smarcc1P97496 BC067074-203ENSMUST00000136755 8274 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Smarcc1P97496 Gstcd-201ENSMUST00000029651 3503 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Smarcc1P97496 Fip1l1-204ENSMUST00000113536 4769 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Smarcc1P97496 Galntl5-202ENSMUST00000114965 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Smarcc1P97496 Zfp536-202ENSMUST00000175941 4423 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Smarcc1P97496 Rplp1-ps1-201ENSMUST00000119410 345 ntBASIC13.32□□□□□ -0.28
Smarcc1P97496 Zfp738-202ENSMUST00000125495 712 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Smarcc1P97496 Gm14091-201ENSMUST00000133534 874 ntTSL 2 BASIC13.32□□□□□ -0.28
Smarcc1P97496 Optc-204ENSMUST00000149380 1180 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Smarcc1P97496 Gm16226-204ENSMUST00000162639 423 ntTSL 3 BASIC13.32□□□□□ -0.28
Smarcc1P97496 Gm19668-201ENSMUST00000178581 747 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Smarcc1P97496 Krtap6-3-202ENSMUST00000185581 520 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Smarcc1P97496 Gm34248-201ENSMUST00000200027 474 ntBASIC13.32□□□□□ -0.28
Smarcc1P97496 Gm6426-201ENSMUST00000209048 854 ntBASIC13.32□□□□□ -0.28
Smarcc1P97496 Gm2696-201ENSMUST00000220062 723 ntAPPRIS P5 BASIC13.32□□□□□ -0.28
Smarcc1P97496 AC134860.5-201ENSMUST00000225071 1249 ntBASIC13.32□□□□□ -0.28
Smarcc1P97496 AC124581.2-201ENSMUST00000225459 282 ntBASIC13.32□□□□□ -0.28
Smarcc1P97496 CT009550.1-201ENSMUST00000225750 864 ntBASIC13.32□□□□□ -0.28
Smarcc1P97496 AC102327.1-201ENSMUST00000226389 742 ntBASIC13.32□□□□□ -0.28
Smarcc1P97496 AC123061.1-201ENSMUST00000228021 999 ntBASIC13.32□□□□□ -0.28
Smarcc1P97496 Scgb3a1-201ENSMUST00000043873 493 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Smarcc1P97496 Cdc42-202ENSMUST00000051477 2108 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Smarcc1P97496 Scgb3a1-202ENSMUST00000076006 598 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Smarcc1P97496 Krtap6-3-201ENSMUST00000079151 444 ntBASIC13.32□□□□□ -0.28
Smarcc1P97496 Bckdk-207ENSMUST00000206745 1702 ntTSL 5 BASIC13.32□□□□□ -0.28
Smarcc1P97496 Rnf20-210ENSMUST00000167496 4312 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Smarcc1P97496 Cbfa2t2-204ENSMUST00000109725 6080 ntAPPRIS ALT1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Smarcc1P97496 Dbx2-201ENSMUST00000054244 3460 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Smarcc1P97496 3830432H09Rik-202ENSMUST00000188909 2414 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Smarcc1P97496 Hnrnph2-203ENSMUST00000074950 2426 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Smarcc1P97496 Il10-201ENSMUST00000016673 1310 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Smarcc1P97496 AC116596.1-201ENSMUST00000228112 1762 ntBASIC13.32□□□□□ -0.28
Smarcc1P97496 Olfr464-205ENSMUST00000217112 2232 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Smarcc1P97496 Gsdma3-202ENSMUST00000107508 1587 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Smarcc1P97496 Bgn-207ENSMUST00000169489 1574 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
Smarcc1P97496 Grin1-206ENSMUST00000114314 3882 ntTSL 5 BASIC13.32□□□□□ -0.28
Smarcc1P97496 Vwa3b-205ENSMUST00000162449 1360 ntAPPRIS P5 TSL 1 (best) BASIC13.32□□□□□ -0.28
Smarcc1P97496 Foxp1-221ENSMUST00000176632 2336 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Smarcc1P97496 Foxp1-222ENSMUST00000176850 2339 ntAPPRIS ALT1 TSL 5 BASIC13.31□□□□□ -0.28
Smarcc1P97496 Rbm6-201ENSMUST00000035201 3999 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Smarcc1P97496 Slc46a2-201ENSMUST00000030081 2833 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Smarcc1P97496 Sirt2-208ENSMUST00000155327 2117 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Smarcc1P97496 Pcdhga3-201ENSMUST00000073447 4720 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Smarcc1P97496 Zc2hc1a-203ENSMUST00000193010 1420 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Smarcc1P97496 Theg-201ENSMUST00000020566 1444 ntAPPRIS P4 TSL 1 (best) BASIC13.31□□□□□ -0.28
Smarcc1P97496 Prkcd-201ENSMUST00000022521 2612 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Smarcc1P97496 Abi1-206ENSMUST00000126112 3360 ntAPPRIS ALT1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Smarcc1P97496 Mcm2-201ENSMUST00000058011 3371 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Smarcc1P97496 Elf2-213ENSMUST00000195432 2161 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Smarcc1P97496 Camk2g-202ENSMUST00000080440 3604 ntAPPRIS P4 TSL 1 (best) BASIC13.31□□□□□ -0.28
Smarcc1P97496 Megf11-203ENSMUST00000118485 3944 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Smarcc1P97496 Atp6v0a1-201ENSMUST00000044721 4008 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Smarcc1P97496 Trpc6-201ENSMUST00000050433 3259 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Smarcc1P97496 Defb48-201ENSMUST00000100493 445 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Smarcc1P97496 Igkv3-12-201ENSMUST00000103396 359 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Smarcc1P97496 Gm24981-201ENSMUST00000104459 132 ntBASIC13.31□□□□□ -0.28
Smarcc1P97496 Gm11569-201ENSMUST00000105057 869 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Smarcc1P97496 Mtcp1-202ENSMUST00000114081 980 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
Smarcc1P97496 Gm12047-201ENSMUST00000117561 944 ntBASIC13.31□□□□□ -0.28
Smarcc1P97496 Gm13792-201ENSMUST00000121350 423 ntBASIC13.31□□□□□ -0.28
Smarcc1P97496 Piga-204ENSMUST00000133813 1086 ntTSL 5 BASIC13.31□□□□□ -0.28
Smarcc1P97496 Gm16252-201ENSMUST00000144420 857 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Smarcc1P97496 Gm25154-201ENSMUST00000157123 119 ntBASIC13.31□□□□□ -0.28
Smarcc1P97496 Gm26610-201ENSMUST00000181529 1024 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Smarcc1P97496 2700099C18Rik-203ENSMUST00000182475 969 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Smarcc1P97496 2810049E08Rik-201ENSMUST00000185600 1102 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Smarcc1P97496 Gm38145-201ENSMUST00000192319 693 ntBASIC13.31□□□□□ -0.28
Smarcc1P97496 Gm4430-202ENSMUST00000193902 1041 ntBASIC13.31□□□□□ -0.28
Smarcc1P97496 Gm4866-201ENSMUST00000197408 589 ntBASIC13.31□□□□□ -0.28
Smarcc1P97496 AC164614.1-201ENSMUST00000216038 397 ntBASIC13.31□□□□□ -0.28
Smarcc1P97496 Phf5a-201ENSMUST00000023117 864 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Smarcc1P97496 Gal-201ENSMUST00000025842 712 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Smarcc1P97496 Bach1-201ENSMUST00000026703 5867 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Smarcc1P97496 C4b-201ENSMUST00000069507 5379 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Smarcc1P97496 Lbh-201ENSMUST00000024857 3064 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Smarcc1P97496 Entpd8-203ENSMUST00000114380 2301 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Smarcc1P97496 Nsd3-206ENSMUST00000142395 10105 ntAPPRIS P2 TSL 5 BASIC13.31□□□□□ -0.28
Smarcc1P97496 Klhl3-202ENSMUST00000160860 7149 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Smarcc1P97496 Syt11-203ENSMUST00000107505 5020 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Smarcc1P97496 Slc37a1-202ENSMUST00000171233 2929 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Smarcc1P97496 Sptbn2-201ENSMUST00000008991 8251 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Smarcc1P97496 Tmem246-201ENSMUST00000042750 2989 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Smarcc1P97496 Smpd4-218ENSMUST00000170273 2166 ntTSL 5 BASIC13.31□□□□□ -0.28
Smarcc1P97496 Rnf144b-201ENSMUST00000068891 4640 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Smarcc1P97496 1700048O20Rik-202ENSMUST00000214777 1900 ntTSL 3 BASIC13.31□□□□□ -0.28
Smarcc1P97496 Tfdp2-204ENSMUST00000179065 2213 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Smarcc1P97496 Myo7a-213ENSMUST00000205746 6689 ntTSL 5 BASIC13.31□□□□□ -0.28
Smarcc1P97496 Palld-202ENSMUST00000121200 4193 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Smarcc1P97496 Prl8a1-202ENSMUST00000095926 1682 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Smarcc1P97496 Aldh3a2-202ENSMUST00000074127 3091 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 76.9 ms