Protein–RNA interactions for Protein: P52946

Pdx1, Pancreas/duodenum homeobox protein 1, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdx1P52946 Ehbp1-202ENSMUST00000109563 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC10.49□□□□□ -0.73
Pdx1P52946 Gm44056-201ENSMUST00000204623 1427 ntBASIC10.49□□□□□ -0.73
Pdx1P52946 AC154171.2-201ENSMUST00000225219 2652 ntBASIC10.49□□□□□ -0.73
Pdx1P52946 Peg3-201ENSMUST00000051209 8694 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Pdx1P52946 Inpp4a-208ENSMUST00000137266 2934 ntTSL 5 BASIC10.48□□□□□ -0.73
Pdx1P52946 Ddr1-201ENSMUST00000003628 3802 ntAPPRIS P3 TSL 1 (best) BASIC10.48□□□□□ -0.73
Pdx1P52946 Dld-201ENSMUST00000110857 2544 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Pdx1P52946 1700018A04Rik-204ENSMUST00000221561 2569 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Pdx1P52946 Gm45719-201ENSMUST00000207954 1662 ntBASIC10.48□□□□□ -0.73
Pdx1P52946 Gm45012-201ENSMUST00000208323 1666 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Pdx1P52946 Gmps-201ENSMUST00000029405 8105 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Pdx1P52946 Rxra-206ENSMUST00000166775 3216 ntAPPRIS P1 TSL 5 BASIC10.48□□□□□ -0.73
Pdx1P52946 Rnf40-206ENSMUST00000206914 3735 ntTSL 5 BASIC10.48□□□□□ -0.73
Pdx1P52946 Zcchc4-201ENSMUST00000031077 5743 ntAPPRIS P3 TSL 1 (best) BASIC10.48□□□□□ -0.73
Pdx1P52946 Sgk3-203ENSMUST00000168907 3779 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Pdx1P52946 Lep-201ENSMUST00000069789 3259 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Pdx1P52946 Lrrfip1-204ENSMUST00000097650 2760 ntAPPRIS P3 TSL 1 (best) BASIC10.48□□□□□ -0.73
Pdx1P52946 Gm22937-201ENSMUST00000103954 131 ntBASIC10.48□□□□□ -0.73
Pdx1P52946 Bex3-203ENSMUST00000113113 766 ntAPPRIS P3 TSL 1 (best) BASIC10.48□□□□□ -0.73
Pdx1P52946 Gm11619-201ENSMUST00000117474 237 ntBASIC10.48□□□□□ -0.73
Pdx1P52946 Tmed5-203ENSMUST00000117759 482 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Pdx1P52946 Gm15136-201ENSMUST00000120552 533 ntBASIC10.48□□□□□ -0.73
Pdx1P52946 BB557941-201ENSMUST00000126549 1097 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Pdx1P52946 Gm16178-201ENSMUST00000129408 677 ntTSL 2 BASIC10.48□□□□□ -0.73
Pdx1P52946 Gm13783-201ENSMUST00000131634 732 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Pdx1P52946 Polr3c-205ENSMUST00000141377 808 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Pdx1P52946 AI854703-202ENSMUST00000154570 3806 ntAPPRIS P1 TSL 2 BASIC10.48□□□□□ -0.73
Pdx1P52946 Gm16547-201ENSMUST00000159474 293 ntBASIC10.48□□□□□ -0.73
Pdx1P52946 Bnip2-208ENSMUST00000165389 945 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Pdx1P52946 Mir6958-201ENSMUST00000184207 73 ntBASIC10.48□□□□□ -0.73
Pdx1P52946 Gm5700-201ENSMUST00000191483 989 ntBASIC10.48□□□□□ -0.73
Pdx1P52946 Gm37390-201ENSMUST00000192452 872 ntBASIC10.48□□□□□ -0.73
Pdx1P52946 Gm37362-201ENSMUST00000194567 634 ntTSL 5 BASIC10.48□□□□□ -0.73
Pdx1P52946 C230057A21Rik-202ENSMUST00000195781 600 ntTSL 3 BASIC10.48□□□□□ -0.73
Pdx1P52946 Gm43564-201ENSMUST00000196185 211 ntBASIC10.48□□□□□ -0.73
Pdx1P52946 Gm42430-201ENSMUST00000197209 616 ntBASIC10.48□□□□□ -0.73
Pdx1P52946 Gm43506-201ENSMUST00000200675 753 ntBASIC10.48□□□□□ -0.73
Pdx1P52946 AC163703.1-201ENSMUST00000214133 339 ntAPPRIS P1 TSL 2 BASIC10.48□□□□□ -0.73
Pdx1P52946 CT030011.1-201ENSMUST00000221959 264 ntTSL 5 BASIC10.48□□□□□ -0.73
Pdx1P52946 AC154806.7-201ENSMUST00000227998 202 ntBASIC10.48□□□□□ -0.73
Pdx1P52946 Rab29-201ENSMUST00000027693 1226 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Pdx1P52946 Prr19-201ENSMUST00000080288 1240 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Pdx1P52946 Gm25514-201ENSMUST00000083860 135 ntBASIC10.48□□□□□ -0.73
Pdx1P52946 Lce1e-201ENSMUST00000090867 711 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Pdx1P52946 Mettl8-201ENSMUST00000090849 1842 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Pdx1P52946 2700068H02Rik-201ENSMUST00000137882 1872 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Pdx1P52946 Cyp2b10-202ENSMUST00000072438 1916 ntAPPRIS P2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Pdx1P52946 Zfp474-201ENSMUST00000072666 1930 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Pdx1P52946 A930003O13Rik-202ENSMUST00000197486 3098 ntBASIC10.48□□□□□ -0.73
Pdx1P52946 Nav2-204ENSMUST00000183659 7765 ntAPPRIS ALT2 TSL 5 BASIC10.48□□□□□ -0.73
Pdx1P52946 Gm3755-201ENSMUST00000169555 1462 ntAPPRIS P1 TSL 5 BASIC10.48□□□□□ -0.73
Pdx1P52946 Gm12248-202ENSMUST00000218429 1462 ntAPPRIS ALT2 TSL 5 BASIC10.48□□□□□ -0.73
Pdx1P52946 Pde4c-202ENSMUST00000110095 3290 ntAPPRIS P2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Pdx1P52946 Vwa5b2-202ENSMUST00000096197 4527 ntAPPRIS ALT2 TSL 5 BASIC10.48□□□□□ -0.73
Pdx1P52946 A930024N18Rik-201ENSMUST00000181251 3955 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Pdx1P52946 Gm10643-201ENSMUST00000098592 1577 ntAPPRIS P1 BASIC10.48□□□□□ -0.73
Pdx1P52946 Slc44a4-202ENSMUST00000169230 2246 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Pdx1P52946 Phf20-ps-201ENSMUST00000185066 2886 ntBASIC10.48□□□□□ -0.73
Pdx1P52946 Dcaf12l1-201ENSMUST00000060481 3509 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Pdx1P52946 Utp23-203ENSMUST00000137116 2921 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Pdx1P52946 Gm26908-201ENSMUST00000181856 1637 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Pdx1P52946 AC151836.1-201ENSMUST00000228730 1637 ntBASIC10.47□□□□□ -0.73
Pdx1P52946 Samd4-206ENSMUST00000137543 6874 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Pdx1P52946 Nectin4-201ENSMUST00000006578 3636 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Pdx1P52946 Micalcl-203ENSMUST00000106645 2309 ntAPPRIS P1 TSL 5 BASIC10.47□□□□□ -0.73
Pdx1P52946 Sun1-205ENSMUST00000110883 3714 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Pdx1P52946 Ap1m2-201ENSMUST00000003397 1706 ntAPPRIS P3 TSL 1 (best) BASIC10.47□□□□□ -0.73
Pdx1P52946 Cd19-201ENSMUST00000032968 2432 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Pdx1P52946 Zdhhc21-201ENSMUST00000030110 8763 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Pdx1P52946 Rasgrp4-213ENSMUST00000204845 3182 ntTSL 5 BASIC10.47□□□□□ -0.73
Pdx1P52946 Tsc22d4-202ENSMUST00000100539 3983 ntAPPRIS P2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Pdx1P52946 Zfp36-201ENSMUST00000051241 2790 ntAPPRIS P2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Pdx1P52946 Pnpla6-201ENSMUST00000004681 4438 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Pdx1P52946 4632404M16Rik-201ENSMUST00000197326 2882 ntBASIC10.47□□□□□ -0.73
Pdx1P52946 Camk2a-204ENSMUST00000115295 979 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Pdx1P52946 Saxo2-202ENSMUST00000126478 430 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Pdx1P52946 Gm13026-201ENSMUST00000140113 608 ntTSL 5 BASIC10.47□□□□□ -0.73
Pdx1P52946 Ighv1-76-201ENSMUST00000169155 294 ntAPPRIS P1 BASIC10.47□□□□□ -0.73
Pdx1P52946 Ighv1-62-1-202ENSMUST00000171270 90 ntAPPRIS P1 BASIC10.47□□□□□ -0.73
Pdx1P52946 Gm24328-201ENSMUST00000175104 67 ntBASIC10.47□□□□□ -0.73
Pdx1P52946 Gm22877-201ENSMUST00000175451 105 ntBASIC10.47□□□□□ -0.73
Pdx1P52946 Gm3671-201ENSMUST00000182463 1007 ntBASIC10.47□□□□□ -0.73
Pdx1P52946 1700084F23Rik-202ENSMUST00000188461 747 ntTSL 3 BASIC10.47□□□□□ -0.73
Pdx1P52946 Gm44304-201ENSMUST00000200509 145 ntBASIC10.47□□□□□ -0.73
Pdx1P52946 Gm3433-201ENSMUST00000210149 1058 ntBASIC10.47□□□□□ -0.73
Pdx1P52946 AC154184.3-201ENSMUST00000225620 1090 ntBASIC10.47□□□□□ -0.73
Pdx1P52946 Gm4604-201ENSMUST00000025040 390 ntBASIC10.47□□□□□ -0.73
Pdx1P52946 Asna1-201ENSMUST00000064314 1256 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Pdx1P52946 Ndrg4-202ENSMUST00000073139 2966 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Pdx1P52946 Olfr60-201ENSMUST00000075470 936 ntAPPRIS P1 BASIC10.47□□□□□ -0.73
Pdx1P52946 Taar7a-201ENSMUST00000078532 1077 ntAPPRIS P1 BASIC10.47□□□□□ -0.73
Pdx1P52946 Olfr169-201ENSMUST00000090062 942 ntAPPRIS P1 BASIC10.47□□□□□ -0.73
Pdx1P52946 Gm4950-201ENSMUST00000091905 618 ntAPPRIS P1 BASIC10.47□□□□□ -0.73
Pdx1P52946 Taar7b-201ENSMUST00000092658 1077 ntAPPRIS P1 BASIC10.47□□□□□ -0.73
Pdx1P52946 Gm42602-201ENSMUST00000200288 3224 ntBASIC10.47□□□□□ -0.73
Pdx1P52946 Zmynd8-205ENSMUST00000109266 5072 ntAPPRIS P4 TSL 1 (best) BASIC10.47□□□□□ -0.73
Pdx1P52946 Atp11c-202ENSMUST00000101527 6044 ntAPPRIS P4 TSL 1 (best) BASIC10.47□□□□□ -0.73
Pdx1P52946 Gm19327-201ENSMUST00000220651 3271 ntBASIC10.47□□□□□ -0.73
Pdx1P52946 Gm14005-210ENSMUST00000225087 1413 ntBASIC10.47□□□□□ -0.73
Pdx1P52946 AC122382.1-201ENSMUST00000225869 2371 ntBASIC10.47□□□□□ -0.73
Retrieved 100 of 76,532 protein–RNA pairs in 56 ms