Protein–RNA interactions for Protein: P43241

Cdx2, Homeobox protein CDX-2, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx2P43241 Gm19299-202ENSMUST00000215724 1435 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Cdx2P43241 Eapp-202ENSMUST00000110713 886 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Cdx2P43241 Gm14145-201ENSMUST00000133385 508 ntTSL 3 BASIC10.11□□□□□ -0.79
Cdx2P43241 Gm13780-201ENSMUST00000150482 1187 ntTSL 5 BASIC10.11□□□□□ -0.79
Cdx2P43241 Gm14146-201ENSMUST00000155885 508 ntTSL 5 BASIC10.11□□□□□ -0.79
Cdx2P43241 BC025446-202ENSMUST00000185307 758 ntAPPRIS P5 TSL 2 BASIC10.11□□□□□ -0.79
Cdx2P43241 Omt2b-203ENSMUST00000187667 727 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Cdx2P43241 Med11-201ENSMUST00000019067 902 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Cdx2P43241 6030460B20Rik-201ENSMUST00000191764 1058 ntBASIC10.11□□□□□ -0.79
Cdx2P43241 Gm44777-203ENSMUST00000206930 571 ntTSL 3 BASIC10.11□□□□□ -0.79
Cdx2P43241 Gm18124-201ENSMUST00000210695 706 ntBASIC10.11□□□□□ -0.79
Cdx2P43241 Prrg2-211ENSMUST00000211337 676 ntTSL 3 BASIC10.11□□□□□ -0.79
Cdx2P43241 Gm3889-201ENSMUST00000212467 612 ntBASIC10.11□□□□□ -0.79
Cdx2P43241 CT030011.1-201ENSMUST00000221959 264 ntTSL 5 BASIC10.11□□□□□ -0.79
Cdx2P43241 Speer2-201ENSMUST00000076500 1118 ntAPPRIS P1 TSL 2 BASIC10.11□□□□□ -0.79
Cdx2P43241 Fam120b-201ENSMUST00000055352 4518 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Cdx2P43241 Tcf4-238ENSMUST00000201631 2660 ntTSL 5 BASIC10.11□□□□□ -0.79
Cdx2P43241 Asb3-202ENSMUST00000117883 2509 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Cdx2P43241 Pcdhgb8-201ENSMUST00000195764 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC10.11□□□□□ -0.79
Cdx2P43241 Fcrl1-206ENSMUST00000194786 1540 ntAPPRIS ALT2 TSL 1 (best) BASIC10.11□□□□□ -0.79
Cdx2P43241 Fam163a-201ENSMUST00000015628 3882 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Cdx2P43241 Pou2f3-201ENSMUST00000034513 2610 ntAPPRIS ALT2 TSL 1 (best) BASIC10.11□□□□□ -0.79
Cdx2P43241 Galnt11-202ENSMUST00000114950 2493 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Cdx2P43241 Gm44975-201ENSMUST00000207435 1390 ntBASIC10.11□□□□□ -0.79
Cdx2P43241 1700048O20Rik-202ENSMUST00000214777 1900 ntTSL 3 BASIC10.11□□□□□ -0.79
Cdx2P43241 Gm5859-201ENSMUST00000165401 2324 ntBASIC10.11□□□□□ -0.79
Cdx2P43241 Fanca-202ENSMUST00000118395 3274 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Cdx2P43241 Hs1bp3-201ENSMUST00000020927 2959 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Cdx2P43241 Ccnt2-201ENSMUST00000027587 6738 ntAPPRIS P2 TSL 1 (best) BASIC10.11□□□□□ -0.79
Cdx2P43241 Gm7190-201ENSMUST00000118669 1452 ntBASIC10.1□□□□□ -0.79
Cdx2P43241 Atp6v1a-201ENSMUST00000063661 3896 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Cdx2P43241 AC122840.1-201ENSMUST00000220915 3334 ntBASIC10.1□□□□□ -0.79
Cdx2P43241 Helq-201ENSMUST00000044684 3689 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Cdx2P43241 Slc35b3-201ENSMUST00000021870 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC10.1□□□□□ -0.79
Cdx2P43241 Fkbp6-201ENSMUST00000044972 1447 ntAPPRIS P3 TSL 1 (best) BASIC10.1□□□□□ -0.79
Cdx2P43241 Dennd4a-201ENSMUST00000038890 8645 ntAPPRIS P1 TSL 5 BASIC10.1□□□□□ -0.79
Cdx2P43241 Cyp7b1-201ENSMUST00000035625 2166 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Cdx2P43241 Abi2-207ENSMUST00000188618 4723 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Cdx2P43241 Defb48-201ENSMUST00000100493 445 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Cdx2P43241 Gm24066-201ENSMUST00000104515 131 ntBASIC10.1□□□□□ -0.79
Cdx2P43241 Gm25561-201ENSMUST00000104607 125 ntBASIC10.1□□□□□ -0.79
Cdx2P43241 Fgf1-203ENSMUST00000117566 418 ntTSL 5 BASIC10.1□□□□□ -0.79
Cdx2P43241 Gm8864-201ENSMUST00000118653 1010 ntBASIC10.1□□□□□ -0.79
Cdx2P43241 1810058I24Rik-201ENSMUST00000130875 690 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Cdx2P43241 Eif5a-212ENSMUST00000153652 840 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Cdx2P43241 Ubl5-203ENSMUST00000160124 501 ntAPPRIS P1 TSL 2 BASIC10.1□□□□□ -0.79
Cdx2P43241 Sectm1b-206ENSMUST00000168459 1075 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Cdx2P43241 Ddt-201ENSMUST00000001716 649 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Cdx2P43241 Gm20474-201ENSMUST00000180089 596 ntBASIC10.1□□□□□ -0.79
Cdx2P43241 Gm3898-201ENSMUST00000180221 613 ntTSL 5 BASIC10.1□□□□□ -0.79
Cdx2P43241 Tex35-206ENSMUST00000187546 856 ntAPPRIS ALT2 TSL 5 BASIC10.1□□□□□ -0.79
Cdx2P43241 Gm35584-201ENSMUST00000191767 641 ntTSL 5 BASIC10.1□□□□□ -0.79
Cdx2P43241 Mylpf-206ENSMUST00000206772 653 ntTSL 3 BASIC10.1□□□□□ -0.79
Cdx2P43241 Gm6426-201ENSMUST00000209048 854 ntBASIC10.1□□□□□ -0.79
Cdx2P43241 Gm5650-201ENSMUST00000209641 598 ntBASIC10.1□□□□□ -0.79
Cdx2P43241 3830406C13Rik-213ENSMUST00000225294 1191 ntAPPRIS P1 BASIC10.1□□□□□ -0.79
Cdx2P43241 Ndufc1-201ENSMUST00000038108 1249 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Cdx2P43241 Cdkn3-201ENSMUST00000067426 917 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Cdx2P43241 Xlr4b-201ENSMUST00000069077 1200 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Cdx2P43241 Tra2b-204ENSMUST00000161286 3403 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Cdx2P43241 Igsf5-201ENSMUST00000000163 1851 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Cdx2P43241 Ucp1-201ENSMUST00000034146 1636 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Cdx2P43241 Vwa1-201ENSMUST00000042196 3623 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Cdx2P43241 Tial1-202ENSMUST00000106226 4451 ntAPPRIS P3 TSL 1 (best) BASIC10.1□□□□□ -0.79
Cdx2P43241 Grin2b-205ENSMUST00000152012 2461 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Cdx2P43241 Dip2c-202ENSMUST00000169960 4801 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Cdx2P43241 Gtf3c2-201ENSMUST00000088010 4552 ntAPPRIS P2 TSL 1 (best) BASIC10.1□□□□□ -0.79
Cdx2P43241 Scn5a-202ENSMUST00000117911 8453 ntAPPRIS P3 TSL 1 (best) BASIC10.1□□□□□ -0.79
Cdx2P43241 Gm2822-201ENSMUST00000164299 2910 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Cdx2P43241 Gm12829-201ENSMUST00000146346 2434 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Cdx2P43241 Crkl-201ENSMUST00000006293 3863 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Cdx2P43241 Serpinf2-201ENSMUST00000043696 2192 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Cdx2P43241 Tpra1-219ENSMUST00000203345 3359 ntTSL 5 BASIC10.09□□□□□ -0.79
Cdx2P43241 Gm29590-201ENSMUST00000190396 1304 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Cdx2P43241 Gm7061-201ENSMUST00000118127 1416 ntBASIC10.09□□□□□ -0.79
Cdx2P43241 Wdr19-204ENSMUST00000203653 6279 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Cdx2P43241 Bbs2-201ENSMUST00000034206 3064 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Cdx2P43241 Gm26684-202ENSMUST00000228229 8257 ntBASIC10.09□□□□□ -0.79
Cdx2P43241 B3glct-201ENSMUST00000100404 4570 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Cdx2P43241 Gm45776-201ENSMUST00000212366 1522 ntBASIC10.09□□□□□ -0.79
Cdx2P43241 Lrrc8a-201ENSMUST00000095078 4301 ntAPPRIS P1 TSL 5 BASIC10.09□□□□□ -0.79
Cdx2P43241 Rps6ka6-202ENSMUST00000082034 4170 ntAPPRIS P2 TSL 5 BASIC10.09□□□□□ -0.79
Cdx2P43241 Gm3404-201ENSMUST00000110596 1130 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Cdx2P43241 Mrps33-202ENSMUST00000114797 500 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Cdx2P43241 Gm44805-201ENSMUST00000127648 765 ntAPPRIS P1 TSL 5 BASIC10.09□□□□□ -0.79
Cdx2P43241 1700017J07Rik-201ENSMUST00000140241 473 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Cdx2P43241 2810433D01Rik-202ENSMUST00000154798 1045 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Cdx2P43241 Gm8918-201ENSMUST00000190587 1087 ntBASIC10.09□□□□□ -0.79
Cdx2P43241 Gm31466-201ENSMUST00000195457 916 ntTSL 3 BASIC10.09□□□□□ -0.79
Cdx2P43241 2010008C14Rik-201ENSMUST00000203956 593 ntBASIC10.09□□□□□ -0.79
Cdx2P43241 Tcl1b1-202ENSMUST00000222342 664 ntAPPRIS ALT2 TSL 2 BASIC10.09□□□□□ -0.79
Cdx2P43241 CT025642.1-201ENSMUST00000224734 1219 ntBASIC10.09□□□□□ -0.79
Cdx2P43241 AC154431.1-201ENSMUST00000224910 880 ntBASIC10.09□□□□□ -0.79
Cdx2P43241 Rps14-201ENSMUST00000025511 683 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Cdx2P43241 Rpl37-201ENSMUST00000045356 835 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Cdx2P43241 Tnnt1-201ENSMUST00000071798 1027 ntAPPRIS P3 TSL 1 (best) BASIC10.09□□□□□ -0.79
Cdx2P43241 Gm23458-201ENSMUST00000083257 169 ntBASIC10.09□□□□□ -0.79
Cdx2P43241 Mcu-201ENSMUST00000009791 1079 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Cdx2P43241 Recql4-201ENSMUST00000036852 3922 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Cdx2P43241 Gm26584-201ENSMUST00000180551 3216 ntTSL 5 BASIC10.09□□□□□ -0.79
Retrieved 100 of 76,532 protein–RNA pairs in 43.9 ms