Protein–RNA interactions for Protein: P29533

Vcam1, Vascular cell adhesion protein 1, mousemouse

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vcam1P29533 Stkld1-201ENSMUST00000055406 2169 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Vcam1P29533 Cpvl-201ENSMUST00000166545 1597 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Vcam1P29533 Bgn-207ENSMUST00000169489 1574 ntAPPRIS P1 TSL 2 BASIC12.18□□□□□ -0.46
Vcam1P29533 AC154186.1-201ENSMUST00000227711 1597 ntBASIC12.18□□□□□ -0.46
Vcam1P29533 Smtn-202ENSMUST00000020721 3335 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Vcam1P29533 Apba2-201ENSMUST00000032732 3321 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Vcam1P29533 Uspl1-202ENSMUST00000100410 3148 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Vcam1P29533 Megf11-202ENSMUST00000093829 3652 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Vcam1P29533 Rffl-201ENSMUST00000021036 1719 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Vcam1P29533 Immt-206ENSMUST00000166975 2469 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Vcam1P29533 Mfap3l-203ENSMUST00000161421 4142 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Vcam1P29533 Plxnb2-201ENSMUST00000060808 6394 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Vcam1P29533 Megf11-203ENSMUST00000118485 3944 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Vcam1P29533 Atp1a2-202ENSMUST00000097464 3186 ntTSL 5 BASIC12.17□□□□□ -0.46
Vcam1P29533 Agpat5-202ENSMUST00000149565 10779 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Vcam1P29533 Cbfa2t2-204ENSMUST00000109725 6080 ntAPPRIS ALT1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Vcam1P29533 Med24-202ENSMUST00000100500 3133 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Vcam1P29533 Klk13-201ENSMUST00000066834 1809 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Vcam1P29533 Cklf-202ENSMUST00000098464 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Vcam1P29533 Lamc2-203ENSMUST00000185356 4916 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Vcam1P29533 Derl2-202ENSMUST00000108523 884 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Vcam1P29533 Mkrn2os-202ENSMUST00000112957 964 ntAPPRIS P1 TSL 2 BASIC12.17□□□□□ -0.46
Vcam1P29533 1700095J12Rik-201ENSMUST00000124620 737 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Vcam1P29533 4930529I22Rik-201ENSMUST00000131509 589 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Vcam1P29533 Gm15472-201ENSMUST00000141652 847 ntTSL 5 BASIC12.17□□□□□ -0.46
Vcam1P29533 Gm12737-201ENSMUST00000142835 725 ntTSL 5 BASIC12.17□□□□□ -0.46
Vcam1P29533 Gm12927-201ENSMUST00000150252 373 ntTSL 2 BASIC12.17□□□□□ -0.46
Vcam1P29533 Gm17782-201ENSMUST00000174345 880 ntBASIC12.17□□□□□ -0.46
Vcam1P29533 Gm27826-201ENSMUST00000175282 255 ntBASIC12.17□□□□□ -0.46
Vcam1P29533 Tmem242-202ENSMUST00000185896 780 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Vcam1P29533 Gm2316-201ENSMUST00000190613 921 ntBASIC12.17□□□□□ -0.46
Vcam1P29533 Gm21149-201ENSMUST00000197995 1212 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Vcam1P29533 9230114K14Rik-202ENSMUST00000198720 837 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Vcam1P29533 1700113A16Rik-203ENSMUST00000200006 563 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Vcam1P29533 Gm18256-201ENSMUST00000209087 907 ntBASIC12.17□□□□□ -0.46
Vcam1P29533 Gm29328-212ENSMUST00000209182 1168 ntTSL 5 BASIC12.17□□□□□ -0.46
Vcam1P29533 Gm45481-201ENSMUST00000209717 877 ntBASIC12.17□□□□□ -0.46
Vcam1P29533 Thy1-205ENSMUST00000215156 460 ntTSL 5 BASIC12.17□□□□□ -0.46
Vcam1P29533 AC124752.1-201ENSMUST00000222131 776 ntTSL 5 BASIC12.17□□□□□ -0.46
Vcam1P29533 Nmb-201ENSMUST00000026817 705 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Vcam1P29533 Gm26440-201ENSMUST00000082591 129 ntBASIC12.17□□□□□ -0.46
Vcam1P29533 Gper1-201ENSMUST00000066211 2537 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Vcam1P29533 Olfr140-202ENSMUST00000111506 3449 ntAPPRIS P1 TSL 2 BASIC12.17□□□□□ -0.46
Vcam1P29533 Fgd3-203ENSMUST00000110087 4698 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Vcam1P29533 Zfp386-201ENSMUST00000073551 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Vcam1P29533 Btn2a2-204ENSMUST00000223877 2109 ntAPPRIS ALT2 BASIC12.17□□□□□ -0.46
Vcam1P29533 Mcf2l-203ENSMUST00000110866 5108 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Vcam1P29533 Adgre5-208ENSMUST00000166939 2980 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Vcam1P29533 Baat-201ENSMUST00000043056 1941 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Vcam1P29533 Gpc6-202ENSMUST00000088483 3488 ntAPPRIS P3 TSL 5 BASIC12.17□□□□□ -0.46
Vcam1P29533 Adgrl3-210ENSMUST00000119788 5394 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Vcam1P29533 Klk1b5-201ENSMUST00000074359 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Vcam1P29533 Flad1-202ENSMUST00000107426 2238 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Vcam1P29533 Gbf1-201ENSMUST00000026254 6450 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Vcam1P29533 Cpa5-201ENSMUST00000062758 2187 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Vcam1P29533 Snx13-202ENSMUST00000163677 3681 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Vcam1P29533 Hs6st2-201ENSMUST00000088172 4318 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Vcam1P29533 Sgk1-213ENSMUST00000164659 2602 ntTSL 5 BASIC12.16□□□□□ -0.46
Vcam1P29533 Fos-201ENSMUST00000021674 2108 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Vcam1P29533 Zeb2-212ENSMUST00000176438 9124 ntAPPRIS P2 TSL 5 BASIC12.16□□□□□ -0.46
Vcam1P29533 Gm7823-201ENSMUST00000120761 1623 ntBASIC12.16□□□□□ -0.46
Vcam1P29533 Ucp1-201ENSMUST00000034146 1636 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Vcam1P29533 Sema6d-207ENSMUST00000103240 4372 ntAPPRIS ALT1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Vcam1P29533 AC129336.2-201ENSMUST00000218053 3086 ntBASIC12.16□□□□□ -0.46
Vcam1P29533 Fam172a-201ENSMUST00000091459 3892 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Vcam1P29533 Htr2c-207ENSMUST00000156697 4654 ntTSL 5 BASIC12.16□□□□□ -0.46
Vcam1P29533 AC125409.1-201ENSMUST00000223213 3370 ntBASIC12.16□□□□□ -0.46
Vcam1P29533 Asb15-201ENSMUST00000031696 2088 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Vcam1P29533 Igll1-201ENSMUST00000100136 870 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Vcam1P29533 Trav13-2-201ENSMUST00000103658 390 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
Vcam1P29533 Olfr1060-ps1-201ENSMUST00000118335 943 ntBASIC12.16□□□□□ -0.46
Vcam1P29533 Gm15489-201ENSMUST00000132811 973 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Vcam1P29533 Gm11521-201ENSMUST00000143302 329 ntTSL 3 BASIC12.16□□□□□ -0.46
Vcam1P29533 Gm7805-201ENSMUST00000154348 448 ntBASIC12.16□□□□□ -0.46
Vcam1P29533 Gm13842-202ENSMUST00000156331 865 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Vcam1P29533 Gm5766-202ENSMUST00000161633 799 ntBASIC12.16□□□□□ -0.46
Vcam1P29533 Gm4462-201ENSMUST00000166453 492 ntBASIC12.16□□□□□ -0.46
Vcam1P29533 Stard6-206ENSMUST00000174118 1185 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Vcam1P29533 Mir133a-1hg-201ENSMUST00000179771 395 ntTSL 3 BASIC12.16□□□□□ -0.46
Vcam1P29533 Gm7672-201ENSMUST00000180915 872 ntBASIC12.16□□□□□ -0.46
Vcam1P29533 Gm17944-201ENSMUST00000186351 643 ntBASIC12.16□□□□□ -0.46
Vcam1P29533 Gm44017-201ENSMUST00000203231 740 ntTSL 5 BASIC12.16□□□□□ -0.46
Vcam1P29533 Map7-203ENSMUST00000213312 795 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Vcam1P29533 Myl10-201ENSMUST00000005611 688 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Vcam1P29533 Tas2r135-201ENSMUST00000070178 1093 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
Vcam1P29533 Hax1-201ENSMUST00000079724 1139 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Vcam1P29533 Cd109-201ENSMUST00000093812 5860 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Vcam1P29533 Vars2-201ENSMUST00000043674 4425 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Vcam1P29533 Kdm3a-202ENSMUST00000167220 4853 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Vcam1P29533 Nfe2l1-203ENSMUST00000107658 4219 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Vcam1P29533 Gpr139-201ENSMUST00000084650 4843 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Vcam1P29533 Rpap1-202ENSMUST00000099529 4813 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Vcam1P29533 Hltf-201ENSMUST00000002502 4955 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Vcam1P29533 Saxo2-201ENSMUST00000056728 2783 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Vcam1P29533 Rai1-203ENSMUST00000102688 6921 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Vcam1P29533 AC107763.1-201ENSMUST00000226082 1365 ntBASIC12.16□□□□□ -0.46
Vcam1P29533 Klk1b26-201ENSMUST00000048945 1386 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Vcam1P29533 Gm37516-201ENSMUST00000192593 1954 ntBASIC12.16□□□□□ -0.46
Vcam1P29533 Morf4l2-201ENSMUST00000033797 1996 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Vcam1P29533 Slc37a4-207ENSMUST00000215420 2128 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 38.2 ms