Protein–RNA interactions for Protein: P0CB42

Alkbh1, Nucleic acid dioxygenase ALKBH1, mousemouse

Predictions only

Length 389 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alkbh1P0CB42 Med24-202ENSMUST00000100500 3133 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
Alkbh1P0CB42 C130060K24Rik-203ENSMUST00000170608 2953 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Alkbh1P0CB42 Fer1l4-201ENSMUST00000109611 6106 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Alkbh1P0CB42 Zfp608-201ENSMUST00000064763 6112 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Alkbh1P0CB42 Prc1-202ENSMUST00000163812 3026 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
Alkbh1P0CB42 Klrc2-202ENSMUST00000112057 1149 ntAPPRIS P4 TSL 1 (best) BASIC11.3□□□□□ -0.6
Alkbh1P0CB42 Gm12947-201ENSMUST00000116114 420 ntBASIC11.3□□□□□ -0.6
Alkbh1P0CB42 Gm15285-201ENSMUST00000119271 473 ntBASIC11.3□□□□□ -0.6
Alkbh1P0CB42 Gm16441-201ENSMUST00000138176 924 ntBASIC11.3□□□□□ -0.6
Alkbh1P0CB42 Gm11670-201ENSMUST00000143435 511 ntTSL 2 BASIC11.3□□□□□ -0.6
Alkbh1P0CB42 Gm6038-201ENSMUST00000154310 948 ntBASIC11.3□□□□□ -0.6
Alkbh1P0CB42 Gm16547-201ENSMUST00000159474 293 ntBASIC11.3□□□□□ -0.6
Alkbh1P0CB42 Tmem229b-ps-201ENSMUST00000168554 506 ntBASIC11.3□□□□□ -0.6
Alkbh1P0CB42 Nmbr-206ENSMUST00000190114 662 ntTSL 3 BASIC11.3□□□□□ -0.6
Alkbh1P0CB42 Gm37141-201ENSMUST00000191938 422 ntBASIC11.3□□□□□ -0.6
Alkbh1P0CB42 Gm8625-201ENSMUST00000194185 1077 ntBASIC11.3□□□□□ -0.6
Alkbh1P0CB42 Gm37723-201ENSMUST00000194480 565 ntBASIC11.3□□□□□ -0.6
Alkbh1P0CB42 Gm37020-201ENSMUST00000195303 992 ntBASIC11.3□□□□□ -0.6
Alkbh1P0CB42 C230057A21Rik-202ENSMUST00000195781 600 ntTSL 3 BASIC11.3□□□□□ -0.6
Alkbh1P0CB42 Gm43564-201ENSMUST00000196185 211 ntBASIC11.3□□□□□ -0.6
Alkbh1P0CB42 4931419H13Rik-201ENSMUST00000199770 973 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Alkbh1P0CB42 Isoc2b-205ENSMUST00000208816 820 ntAPPRIS P1 TSL 3 BASIC11.3□□□□□ -0.6
Alkbh1P0CB42 Tcf25-210ENSMUST00000212880 827 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Alkbh1P0CB42 AC163703.1-201ENSMUST00000214133 339 ntAPPRIS P1 TSL 2 BASIC11.3□□□□□ -0.6
Alkbh1P0CB42 Cmtm2a-201ENSMUST00000034344 1081 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Alkbh1P0CB42 Rps10-ps1-201ENSMUST00000074353 495 ntBASIC11.3□□□□□ -0.6
Alkbh1P0CB42 Atf7-201ENSMUST00000096143 390 ntBASIC11.3□□□□□ -0.6
Alkbh1P0CB42 Pcdhb14-201ENSMUST00000052387 8695 ntAPPRIS P1 BASIC11.3□□□□□ -0.6
Alkbh1P0CB42 Gm12799-201ENSMUST00000118151 2560 ntBASIC11.3□□□□□ -0.6
Alkbh1P0CB42 Htr3b-201ENSMUST00000008734 2411 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Alkbh1P0CB42 Tram2-201ENSMUST00000037998 6492 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Alkbh1P0CB42 Rab2b-201ENSMUST00000022765 2906 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Alkbh1P0CB42 Cdca8-202ENSMUST00000084296 1626 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Alkbh1P0CB42 Aldh1a3-201ENSMUST00000015278 3443 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Alkbh1P0CB42 Pnpla6-212ENSMUST00000208002 4444 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Alkbh1P0CB42 Rbm8a-201ENSMUST00000048915 2608 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Alkbh1P0CB42 Scaf1-201ENSMUST00000085383 4293 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Alkbh1P0CB42 Ticam1-201ENSMUST00000058136 2992 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Alkbh1P0CB42 Ndufab1-201ENSMUST00000033157 3479 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Alkbh1P0CB42 9430015G10Rik-202ENSMUST00000105576 1329 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Alkbh1P0CB42 Olfr582-203ENSMUST00000211036 1849 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Alkbh1P0CB42 Ddr1-201ENSMUST00000003628 3802 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
Alkbh1P0CB42 Tm9sf1-202ENSMUST00000120041 2164 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Alkbh1P0CB42 AC144938.1-201ENSMUST00000223994 2167 ntBASIC11.3□□□□□ -0.6
Alkbh1P0CB42 Gm37160-201ENSMUST00000193081 1689 ntBASIC11.3□□□□□ -0.6
Alkbh1P0CB42 Gm45170-201ENSMUST00000206746 1671 ntBASIC11.3□□□□□ -0.6
Alkbh1P0CB42 Ift88os-201ENSMUST00000149702 2016 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Alkbh1P0CB42 Gm12296-201ENSMUST00000144922 3220 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Alkbh1P0CB42 Alas1-202ENSMUST00000112524 3089 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Alkbh1P0CB42 Trpc6-202ENSMUST00000214596 2913 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Alkbh1P0CB42 Cd19-201ENSMUST00000032968 2432 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Alkbh1P0CB42 1600014C10Rik-202ENSMUST00000165308 3335 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
Alkbh1P0CB42 1600014C10Rik-204ENSMUST00000178207 3341 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Alkbh1P0CB42 Gm8016-201ENSMUST00000221830 1575 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Alkbh1P0CB42 Ndrg4-202ENSMUST00000073139 2966 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Alkbh1P0CB42 Prrx1-201ENSMUST00000027878 4952 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Alkbh1P0CB42 Slc1a4-202ENSMUST00000109594 3926 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Alkbh1P0CB42 Zcchc4-201ENSMUST00000031077 5743 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
Alkbh1P0CB42 Map3k12-208ENSMUST00000171565 4318 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Alkbh1P0CB42 Mir291b-201ENSMUST00000104838 79 ntBASIC11.29□□□□□ -0.6
Alkbh1P0CB42 Ifitm7-201ENSMUST00000117803 853 ntAPPRIS P5 TSL 1 (best) BASIC11.29□□□□□ -0.6
Alkbh1P0CB42 Syngr4-202ENSMUST00000120299 722 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Alkbh1P0CB42 Gm15136-201ENSMUST00000120552 533 ntBASIC11.29□□□□□ -0.6
Alkbh1P0CB42 Nop56-204ENSMUST00000136621 868 ntTSL 5 BASIC11.29□□□□□ -0.6
Alkbh1P0CB42 Gm13026-201ENSMUST00000140113 608 ntTSL 5 BASIC11.29□□□□□ -0.6
Alkbh1P0CB42 Gm8194-201ENSMUST00000159783 859 ntBASIC11.29□□□□□ -0.6
Alkbh1P0CB42 9330179D12Rik-201ENSMUST00000180569 1105 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Alkbh1P0CB42 P4htm-204ENSMUST00000193621 1297 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Alkbh1P0CB42 Ptbp2-210ENSMUST00000198403 389 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Alkbh1P0CB42 Gm5298-201ENSMUST00000201122 892 ntBASIC11.29□□□□□ -0.6
Alkbh1P0CB42 Gm20186-201ENSMUST00000201775 737 ntTSL 3 BASIC11.29□□□□□ -0.6
Alkbh1P0CB42 Fcer2a-205ENSMUST00000208145 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Alkbh1P0CB42 E230034D01Rik-203ENSMUST00000217357 1159 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Alkbh1P0CB42 Dydc2-201ENSMUST00000022316 818 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Alkbh1P0CB42 AC154407.1-201ENSMUST00000226777 526 ntBASIC11.29□□□□□ -0.6
Alkbh1P0CB42 AC130477.1-201ENSMUST00000226982 420 ntBASIC11.29□□□□□ -0.6
Alkbh1P0CB42 AC164883.7-201ENSMUST00000228534 851 ntBASIC11.29□□□□□ -0.6
Alkbh1P0CB42 Ncam1-201ENSMUST00000114476 2567 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Alkbh1P0CB42 Gm32914-201ENSMUST00000203815 2228 ntBASIC11.29□□□□□ -0.6
Alkbh1P0CB42 Adat1-202ENSMUST00000120457 1677 ntTSL 5 BASIC11.29□□□□□ -0.6
Alkbh1P0CB42 Gm43321-201ENSMUST00000198897 2409 ntBASIC11.29□□□□□ -0.6
Alkbh1P0CB42 Pcdhga1-201ENSMUST00000194190 4692 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Alkbh1P0CB42 Ica1-204ENSMUST00000115520 1876 ntAPPRIS P2 TSL 5 BASIC11.29□□□□□ -0.6
Alkbh1P0CB42 Rtl1-201ENSMUST00000149046 6358 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Alkbh1P0CB42 Cyp2g1-201ENSMUST00000040944 1896 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Alkbh1P0CB42 Zfp526-201ENSMUST00000055604 3380 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Alkbh1P0CB42 Mrgpre-201ENSMUST00000054048 3761 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Alkbh1P0CB42 Gm37583-201ENSMUST00000195460 2487 ntBASIC11.29□□□□□ -0.6
Alkbh1P0CB42 Csnk1g1-214ENSMUST00000206594 2482 ntAPPRIS P2 TSL 5 BASIC11.29□□□□□ -0.6
Alkbh1P0CB42 Tdrd3-202ENSMUST00000168275 2657 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
Alkbh1P0CB42 Bace1-202ENSMUST00000078111 4041 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Alkbh1P0CB42 Gm18262-201ENSMUST00000222560 1946 ntBASIC11.29□□□□□ -0.6
Alkbh1P0CB42 Topors-201ENSMUST00000042575 3856 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Alkbh1P0CB42 Ap1b1-201ENSMUST00000009234 4085 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Alkbh1P0CB42 Ncam1-203ENSMUST00000192584 2525 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Alkbh1P0CB42 Rangap1-203ENSMUST00000171115 2740 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Alkbh1P0CB42 Sun1-205ENSMUST00000110883 3714 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Alkbh1P0CB42 Ccr6-202ENSMUST00000164411 1553 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Alkbh1P0CB42 Trim34a-201ENSMUST00000060315 2590 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Alkbh1P0CB42 Trp53inp2-201ENSMUST00000043237 3979 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 40 ms