Protein–RNA interactions for Protein: P09027

Hoxd3, Homeobox protein Hox-D3, mousemouse

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxd3P09027 Asz1-201ENSMUST00000010940 1736 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
Hoxd3P09027 Serinc4-202ENSMUST00000110613 2240 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
Hoxd3P09027 Rad18-204ENSMUST00000113182 2220 ntAPPRIS ALT2 TSL 5 BASIC8.67□□□□□ -1.02
Hoxd3P09027 Gm22032-201ENSMUST00000116946 116 ntBASIC8.67□□□□□ -1.02
Hoxd3P09027 Gm11422-201ENSMUST00000118925 1103 ntBASIC8.67□□□□□ -1.02
Hoxd3P09027 Gm14219-201ENSMUST00000120414 288 ntBASIC8.67□□□□□ -1.02
Hoxd3P09027 Nsa2-ps2-201ENSMUST00000120785 773 ntBASIC8.67□□□□□ -1.02
Hoxd3P09027 Gm6451-201ENSMUST00000121488 717 ntBASIC8.67□□□□□ -1.02
Hoxd3P09027 Gm16411-201ENSMUST00000122164 1100 ntBASIC8.67□□□□□ -1.02
Hoxd3P09027 Gm13093-201ENSMUST00000126212 2485 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
Hoxd3P09027 Gm15507-201ENSMUST00000133523 592 ntTSL 5 BASIC8.67□□□□□ -1.02
Hoxd3P09027 Gm11211-201ENSMUST00000143618 359 ntTSL 3 BASIC8.67□□□□□ -1.02
Hoxd3P09027 Gm14368-201ENSMUST00000145305 415 ntBASIC8.67□□□□□ -1.02
Hoxd3P09027 4930515L19Rik-201ENSMUST00000152352 769 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
Hoxd3P09027 Nphs1os-201ENSMUST00000152625 1339 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
Hoxd3P09027 Bloc1s1-205ENSMUST00000153731 613 ntTSL 5 BASIC8.67□□□□□ -1.02
Hoxd3P09027 Gm25554-201ENSMUST00000158075 113 ntBASIC8.67□□□□□ -1.02
Hoxd3P09027 Gm10269-201ENSMUST00000165229 372 ntAPPRIS P1 BASIC8.67□□□□□ -1.02
Hoxd3P09027 Gm17116-201ENSMUST00000169175 1013 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
Hoxd3P09027 Arhgef16-207ENSMUST00000169623 2474 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
Hoxd3P09027 Gm20471-201ENSMUST00000172793 626 ntTSL 3 BASIC8.67□□□□□ -1.02
Hoxd3P09027 Gm18294-201ENSMUST00000176980 1748 ntBASIC8.67□□□□□ -1.02
Hoxd3P09027 Gm8513-201ENSMUST00000182830 1003 ntBASIC8.67□□□□□ -1.02
Hoxd3P09027 Gm9135-201ENSMUST00000182963 990 ntBASIC8.67□□□□□ -1.02
Hoxd3P09027 6530403H02Rik-203ENSMUST00000183168 843 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
Hoxd3P09027 Nr5a2-205ENSMUST00000192929 1756 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
Hoxd3P09027 Gm44392-201ENSMUST00000196758 115 ntBASIC8.67□□□□□ -1.02
Hoxd3P09027 Gm42464-202ENSMUST00000198111 774 ntBASIC8.67□□□□□ -1.02
Hoxd3P09027 Diablo-210ENSMUST00000200247 748 ntTSL 5 BASIC8.67□□□□□ -1.02
Hoxd3P09027 Gm5298-201ENSMUST00000201122 892 ntBASIC8.67□□□□□ -1.02
Hoxd3P09027 Gm43629-201ENSMUST00000201782 704 ntBASIC8.67□□□□□ -1.02
Hoxd3P09027 Vmn2r-ps25-201ENSMUST00000202322 2321 ntBASIC8.67□□□□□ -1.02
Hoxd3P09027 Gm5307-201ENSMUST00000204772 760 ntBASIC8.67□□□□□ -1.02
Hoxd3P09027 Bub3-203ENSMUST00000207442 3414 ntAPPRIS ALT1 TSL 3 BASIC8.67□□□□□ -1.02
Hoxd3P09027 Gm39288-201ENSMUST00000210554 446 ntBASIC8.67□□□□□ -1.02
Hoxd3P09027 Gm45410-201ENSMUST00000211331 1093 ntBASIC8.67□□□□□ -1.02
Hoxd3P09027 Olfr861-ps1-201ENSMUST00000212783 928 ntBASIC8.67□□□□□ -1.02
Hoxd3P09027 AC122024.3-201ENSMUST00000217719 294 ntBASIC8.67□□□□□ -1.02
Hoxd3P09027 AC153526.1-201ENSMUST00000219750 190 ntBASIC8.67□□□□□ -1.02
Hoxd3P09027 Gm3619-201ENSMUST00000219947 775 ntBASIC8.67□□□□□ -1.02
Hoxd3P09027 Gm40394-201ENSMUST00000221321 633 ntTSL 5 BASIC8.67□□□□□ -1.02
Hoxd3P09027 Nqo2-204ENSMUST00000222740 995 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
Hoxd3P09027 Nudt13-203ENSMUST00000223663 1633 ntAPPRIS P1 BASIC8.67□□□□□ -1.02
Hoxd3P09027 Zdhhc6-205ENSMUST00000224291 2603 ntBASIC8.67□□□□□ -1.02
Hoxd3P09027 AC154537.1-201ENSMUST00000226101 1304 ntBASIC8.67□□□□□ -1.02
Hoxd3P09027 AC159002.1-201ENSMUST00000226714 924 ntBASIC8.67□□□□□ -1.02
Hoxd3P09027 Eny2-204ENSMUST00000226827 558 ntAPPRIS P1 BASIC8.67□□□□□ -1.02
Hoxd3P09027 AC164302.1-201ENSMUST00000227036 433 ntBASIC8.67□□□□□ -1.02
Hoxd3P09027 Fopnl-201ENSMUST00000023357 1465 ntAPPRIS P2 TSL 1 (best) BASIC8.67□□□□□ -1.02
Hoxd3P09027 Lbh-201ENSMUST00000024857 3064 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
Hoxd3P09027 Crygb-201ENSMUST00000027090 634 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
Hoxd3P09027 Mitd1-201ENSMUST00000027257 1231 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
Hoxd3P09027 Sash3-201ENSMUST00000033427 2677 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
Hoxd3P09027 Nme6-201ENSMUST00000035053 1074 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
Hoxd3P09027 Fgl2-201ENSMUST00000035799 3788 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
Hoxd3P09027 Rbm4b-201ENSMUST00000036744 1783 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
Hoxd3P09027 Tas2r107-201ENSMUST00000065781 1032 ntAPPRIS P1 BASIC8.67□□□□□ -1.02
Hoxd3P09027 Tas2r134-201ENSMUST00000070028 898 ntAPPRIS P1 BASIC8.67□□□□□ -1.02
Hoxd3P09027 Mok-203ENSMUST00000084974 1132 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
Hoxd3P09027 Btbd9-202ENSMUST00000168787 6857 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
Hoxd3P09027 Celf1-204ENSMUST00000111448 4432 ntAPPRIS ALT1 TSL 5 BASIC8.67□□□□□ -1.02
Hoxd3P09027 Cep76-201ENSMUST00000097542 3979 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
Hoxd3P09027 Dcaf12l1-202ENSMUST00000115056 3495 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
Hoxd3P09027 Lef1-201ENSMUST00000029611 3482 ntAPPRIS P2 TSL 1 (best) BASIC8.67□□□□□ -1.02
Hoxd3P09027 Ssh1-201ENSMUST00000077689 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC8.67□□□□□ -1.02
Hoxd3P09027 Slc17a5-202ENSMUST00000117645 3114 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
Hoxd3P09027 Pde4c-207ENSMUST00000224874 3099 ntAPPRIS ALT2 BASIC8.67□□□□□ -1.02
Hoxd3P09027 Hmbox1-202ENSMUST00000067843 2931 ntAPPRIS P3 TSL 1 (best) BASIC8.67□□□□□ -1.02
Hoxd3P09027 Pla2g15-201ENSMUST00000034377 2706 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
Hoxd3P09027 Pcgf2-207ENSMUST00000179765 2485 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
Hoxd3P09027 Ddo-202ENSMUST00000213442 2408 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
Hoxd3P09027 Fip1l1-204ENSMUST00000113536 4769 ntAPPRIS ALT2 TSL 1 (best) BASIC8.66□□□□□ -1.02
Hoxd3P09027 Uqcc1-203ENSMUST00000109632 2313 ntTSL 5 BASIC8.66□□□□□ -1.02
Hoxd3P09027 Gm5859-201ENSMUST00000165401 2324 ntBASIC8.66□□□□□ -1.02
Hoxd3P09027 Lax1-201ENSMUST00000169295 2309 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
Hoxd3P09027 Hivep2-204ENSMUST00000187083 9268 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
Hoxd3P09027 Gm45011-201ENSMUST00000207620 2297 ntBASIC8.66□□□□□ -1.02
Hoxd3P09027 Nod1-201ENSMUST00000060655 4315 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
Hoxd3P09027 Fyn-207ENSMUST00000146287 2135 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
Hoxd3P09027 Myh2-201ENSMUST00000018641 6018 ntAPPRIS P1 TSL 5 BASIC8.66□□□□□ -1.02
Hoxd3P09027 Alas2-202ENSMUST00000112715 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC8.66□□□□□ -1.02
Hoxd3P09027 Ntng2-202ENSMUST00000071201 1881 ntTSL 5 BASIC8.66□□□□□ -1.02
Hoxd3P09027 Rbm10-205ENSMUST00000115375 3698 ntAPPRIS ALT2 TSL 1 (best) BASIC8.66□□□□□ -1.02
Hoxd3P09027 Gm36975-201ENSMUST00000194105 1828 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
Hoxd3P09027 Mybph-201ENSMUST00000038445 1828 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
Hoxd3P09027 Gaa-203ENSMUST00000106259 3633 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
Hoxd3P09027 Tmcc2-203ENSMUST00000132435 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC8.66□□□□□ -1.02
Hoxd3P09027 Vtn-201ENSMUST00000017488 1744 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
Hoxd3P09027 Poldip3-201ENSMUST00000058793 3297 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
Hoxd3P09027 Myo5a-206ENSMUST00000136731 6480 ntAPPRIS ALT1 TSL 5 BASIC8.66□□□□□ -1.02
Hoxd3P09027 Gm26615-201ENSMUST00000181522 3201 ntTSL 2 BASIC8.66□□□□□ -1.02
Hoxd3P09027 Eps8l2-201ENSMUST00000026577 3191 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
Hoxd3P09027 Iyd-201ENSMUST00000019896 1579 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
Hoxd3P09027 Fam120b-201ENSMUST00000055352 4518 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
Hoxd3P09027 Myh1-202ENSMUST00000075734 6012 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
Hoxd3P09027 Gm15622-201ENSMUST00000143025 1464 ntTSL 5 BASIC8.66□□□□□ -1.02
Hoxd3P09027 Rfpl4-202ENSMUST00000179971 1445 ntAPPRIS P2 TSL 1 (best) BASIC8.66□□□□□ -1.02
Hoxd3P09027 Vmn1r89-205ENSMUST00000227276 1417 ntAPPRIS ALT2 BASIC8.66□□□□□ -1.02
Hoxd3P09027 Serpini2-201ENSMUST00000039047 1411 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
Hoxd3P09027 Ttc27-201ENSMUST00000024882 2820 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
Retrieved 100 of 76,532 protein–RNA pairs in 54.5 ms