Protein–RNA interactions for Protein: F6SEU4

Syngap1, Ras/Rap GTPase-activating protein SynGAP, mousemouse

Predictions only

Length 1,340 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syngap1F6SEU4 Exosc9-201ENSMUST00000029269 1617 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Syngap1F6SEU4 Gm7168-201ENSMUST00000088809 1603 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Syngap1F6SEU4 Jmjd4-202ENSMUST00000108777 4351 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Syngap1F6SEU4 Clvs2-204ENSMUST00000161692 4283 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Syngap1F6SEU4 Gm8020-201ENSMUST00000170174 1406 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Syngap1F6SEU4 Zmiz2-205ENSMUST00000109787 4116 ntAPPRIS P2 TSL 5 BASIC12.02□□□□□ -0.49
Syngap1F6SEU4 Gm16214-201ENSMUST00000143710 1388 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Syngap1F6SEU4 Mov10l1-203ENSMUST00000146993 4133 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
Syngap1F6SEU4 Akr1c6-201ENSMUST00000021630 1396 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Syngap1F6SEU4 Acin1-203ENSMUST00000111484 4048 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
Syngap1F6SEU4 Swap70-201ENSMUST00000033325 4027 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Syngap1F6SEU4 Actg2-202ENSMUST00000121731 1273 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Syngap1F6SEU4 Treml4-203ENSMUST00000136272 811 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Syngap1F6SEU4 Gm12744-201ENSMUST00000146976 519 ntTSL 3 BASIC12.02□□□□□ -0.49
Syngap1F6SEU4 Gm12426-201ENSMUST00000153083 371 ntTSL 5 BASIC12.02□□□□□ -0.49
Syngap1F6SEU4 Treml4-206ENSMUST00000154335 838 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Syngap1F6SEU4 Dusp3-207ENSMUST00000176261 496 ntTSL 3 BASIC12.02□□□□□ -0.49
Syngap1F6SEU4 1010001N08Rik-202ENSMUST00000181316 728 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Syngap1F6SEU4 6530411M01Rik-201ENSMUST00000181618 1033 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Syngap1F6SEU4 Milr1-206ENSMUST00000182896 918 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Syngap1F6SEU4 Milr1-207ENSMUST00000182908 811 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Syngap1F6SEU4 Gm43564-201ENSMUST00000196185 211 ntBASIC12.02□□□□□ -0.49
Syngap1F6SEU4 Gm44640-201ENSMUST00000206894 247 ntBASIC12.02□□□□□ -0.49
Syngap1F6SEU4 AC114645.2-201ENSMUST00000214308 791 ntTSL 3 BASIC12.02□□□□□ -0.49
Syngap1F6SEU4 AC124772.3-201ENSMUST00000222535 575 ntBASIC12.02□□□□□ -0.49
Syngap1F6SEU4 AC133496.1-201ENSMUST00000223891 743 ntBASIC12.02□□□□□ -0.49
Syngap1F6SEU4 CT010505.2-201ENSMUST00000227918 998 ntBASIC12.02□□□□□ -0.49
Syngap1F6SEU4 Rpl37-201ENSMUST00000045356 835 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Syngap1F6SEU4 Ccl27a-201ENSMUST00000074387 405 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
Syngap1F6SEU4 Olfr115-201ENSMUST00000076936 939 ntAPPRIS P2 BASIC12.02□□□□□ -0.49
Syngap1F6SEU4 Olfr1511-201ENSMUST00000078171 957 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
Syngap1F6SEU4 Elavl2-207ENSMUST00000107118 3797 ntTSL 5 BASIC12.02□□□□□ -0.49
Syngap1F6SEU4 Irak4-202ENSMUST00000109248 3437 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Syngap1F6SEU4 Tbc1d14-202ENSMUST00000124036 2765 ntTSL 5 BASIC12.02□□□□□ -0.49
Syngap1F6SEU4 Tnfaip3-201ENSMUST00000019997 4422 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Syngap1F6SEU4 Scaf1-206ENSMUST00000211735 4209 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Syngap1F6SEU4 Rtn3-202ENSMUST00000065304 5030 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Syngap1F6SEU4 Olfr1428-203ENSMUST00000214103 2127 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Syngap1F6SEU4 Per1-202ENSMUST00000101004 3507 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Syngap1F6SEU4 Asns-202ENSMUST00000115542 2016 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Syngap1F6SEU4 Tubd1-203ENSMUST00000108030 1964 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Syngap1F6SEU4 Plin4-202ENSMUST00000190703 5756 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Syngap1F6SEU4 AC166359.1-201ENSMUST00000220243 1871 ntBASIC12.01□□□□□ -0.49
Syngap1F6SEU4 Adgb-201ENSMUST00000045328 1893 ntTSL 2 BASIC12.01□□□□□ -0.49
Syngap1F6SEU4 Rsad1-201ENSMUST00000040487 4143 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Syngap1F6SEU4 Gm5739-201ENSMUST00000208601 1703 ntBASIC12.01□□□□□ -0.49
Syngap1F6SEU4 Stau2-206ENSMUST00000128957 3907 ntTSL 5 BASIC12.01□□□□□ -0.49
Syngap1F6SEU4 Rdh7-201ENSMUST00000047199 1678 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Syngap1F6SEU4 Sema4c-202ENSMUST00000191642 3892 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Syngap1F6SEU4 Itsn2-211ENSMUST00000219007 4977 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Syngap1F6SEU4 Zfp68-203ENSMUST00000110905 4749 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Syngap1F6SEU4 Neu2-206ENSMUST00000166259 1596 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Syngap1F6SEU4 Fhitos-201ENSMUST00000160149 1511 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Syngap1F6SEU4 Htr1f-201ENSMUST00000063076 2509 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Syngap1F6SEU4 Jaml-201ENSMUST00000050020 2461 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Syngap1F6SEU4 Gpx6-201ENSMUST00000004453 1340 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Syngap1F6SEU4 Gm12947-201ENSMUST00000116114 420 ntBASIC12.01□□□□□ -0.49
Syngap1F6SEU4 Gm6441-201ENSMUST00000120983 696 ntBASIC12.01□□□□□ -0.49
Syngap1F6SEU4 Smim6-201ENSMUST00000132961 978 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Syngap1F6SEU4 Gm5083-202ENSMUST00000163056 1204 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Syngap1F6SEU4 Gm20629-201ENSMUST00000176157 513 ntTSL 3 BASIC12.01□□□□□ -0.49
Syngap1F6SEU4 Myo1h-206ENSMUST00000196467 1208 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Syngap1F6SEU4 Gm42821-201ENSMUST00000199771 489 ntBASIC12.01□□□□□ -0.49
Syngap1F6SEU4 Gm43349-201ENSMUST00000200047 503 ntTSL 2 BASIC12.01□□□□□ -0.49
Syngap1F6SEU4 Rp9-204ENSMUST00000216973 796 ntAPPRIS ALT2 TSL 3 BASIC12.01□□□□□ -0.49
Syngap1F6SEU4 AC102523.1-201ENSMUST00000228706 1144 ntBASIC12.01□□□□□ -0.49
Syngap1F6SEU4 Fam186a-201ENSMUST00000062631 759 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Syngap1F6SEU4 Olfr1329-201ENSMUST00000071979 942 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Syngap1F6SEU4 Olfr403-201ENSMUST00000076675 942 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Syngap1F6SEU4 Olfr43-201ENSMUST00000078936 1092 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Syngap1F6SEU4 Gm10701-201ENSMUST00000098926 906 ntTSL 2 BASIC12.01□□□□□ -0.49
Syngap1F6SEU4 Numa1-201ENSMUST00000084852 7180 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Syngap1F6SEU4 Anp32e-204ENSMUST00000168106 2890 ntTSL 5 BASIC12.01□□□□□ -0.49
Syngap1F6SEU4 Ghsr-201ENSMUST00000057186 4433 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Syngap1F6SEU4 Pik3r5-201ENSMUST00000021283 4370 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Syngap1F6SEU4 Rnf165-202ENSMUST00000182024 4309 ntTSL 5 BASIC12.01□□□□□ -0.49
Syngap1F6SEU4 Igsf1-204ENSMUST00000114893 2671 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Syngap1F6SEU4 Map4-203ENSMUST00000163979 3320 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Syngap1F6SEU4 Platr6-201ENSMUST00000180731 1818 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Syngap1F6SEU4 Poldip3-201ENSMUST00000058793 3297 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Syngap1F6SEU4 Zfp85os-202ENSMUST00000143812 1784 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Syngap1F6SEU4 Smtn-203ENSMUST00000075118 3117 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Syngap1F6SEU4 Vcp-rs-201ENSMUST00000120233 2406 ntBASIC12.01□□□□□ -0.49
Syngap1F6SEU4 Fyb2-202ENSMUST00000106804 3068 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Syngap1F6SEU4 Gm20427-201ENSMUST00000168978 3703 ntTSL 2 BASIC12.01□□□□□ -0.49
Syngap1F6SEU4 Tas1r2-201ENSMUST00000030510 3047 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Syngap1F6SEU4 Nod1-201ENSMUST00000060655 4315 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Syngap1F6SEU4 Myo7a-204ENSMUST00000107128 7506 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Syngap1F6SEU4 Slc44a4-202ENSMUST00000169230 2246 ntTSL 1 (best) BASIC12□□□□□ -0.49
Syngap1F6SEU4 Drc7-201ENSMUST00000058479 2832 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Syngap1F6SEU4 Ophn1-201ENSMUST00000033560 7170 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Syngap1F6SEU4 Exoc3l4-201ENSMUST00000072646 2778 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Syngap1F6SEU4 Kat6b-201ENSMUST00000069648 7649 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Syngap1F6SEU4 Zfp384-205ENSMUST00000112424 2673 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Syngap1F6SEU4 Gpcpd1-202ENSMUST00000060955 3686 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Syngap1F6SEU4 Pknox1-206ENSMUST00000176701 4232 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Syngap1F6SEU4 Ift46-201ENSMUST00000002099 4169 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Syngap1F6SEU4 Enpp7-201ENSMUST00000092373 1370 ntAPPRIS P2 TSL 2 BASIC12□□□□□ -0.49
Syngap1F6SEU4 Gm4869-201ENSMUST00000197549 2955 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Syngap1F6SEU4 Cage1-201ENSMUST00000074969 2856 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 39.2 ms