Protein–RNA interactions for Protein: Q9DB34

Chmp2a, Charged multivesicular body protein 2a, mousemouse

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2aQ9DB34 Tsga8-201ENSMUST00000049420 1070 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Chmp2aQ9DB34 Olfr314-201ENSMUST00000076393 1131 ntAPPRIS P1 BASIC11.1□□□□□ -0.63
Chmp2aQ9DB34 Gm5544-201ENSMUST00000098828 891 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Chmp2aQ9DB34 Bpnt1-201ENSMUST00000027916 2200 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Chmp2aQ9DB34 Ssh1-201ENSMUST00000077689 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Chmp2aQ9DB34 Kalrn-205ENSMUST00000114953 4722 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Chmp2aQ9DB34 Slx4ip-206ENSMUST00000180277 2723 ntAPPRIS P1 TSL 3 BASIC11.1□□□□□ -0.63
Chmp2aQ9DB34 Gm10912-201ENSMUST00000104891 1661 ntAPPRIS P1 BASIC11.1□□□□□ -0.63
Chmp2aQ9DB34 Gm45272-203ENSMUST00000211111 1693 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Chmp2aQ9DB34 Gm37580-201ENSMUST00000192408 2800 ntBASIC11.1□□□□□ -0.63
Chmp2aQ9DB34 Med17-201ENSMUST00000034411 3964 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Chmp2aQ9DB34 Fli1-201ENSMUST00000016231 3318 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Chmp2aQ9DB34 Gnl2-201ENSMUST00000030684 2366 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Chmp2aQ9DB34 Nf2-202ENSMUST00000056290 2394 ntAPPRIS ALT1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Chmp2aQ9DB34 Ddx11-201ENSMUST00000163605 4149 ntAPPRIS P2 TSL 5 BASIC11.1□□□□□ -0.63
Chmp2aQ9DB34 Gm3716-202ENSMUST00000198582 2879 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Chmp2aQ9DB34 Vstm2a-201ENSMUST00000109645 3264 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Chmp2aQ9DB34 Ampd3-206ENSMUST00000170374 3489 ntAPPRIS P2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Chmp2aQ9DB34 Cast-212ENSMUST00000223309 1529 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Chmp2aQ9DB34 Gab3-202ENSMUST00000114104 1705 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
Chmp2aQ9DB34 Gm37697-201ENSMUST00000195680 1844 ntBASIC11.09□□□□□ -0.63
Chmp2aQ9DB34 Gm28624-201ENSMUST00000186430 2131 ntBASIC11.09□□□□□ -0.63
Chmp2aQ9DB34 AC159195.3-201ENSMUST00000225162 2211 ntBASIC11.09□□□□□ -0.63
Chmp2aQ9DB34 BC004004-201ENSMUST00000064709 2803 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Chmp2aQ9DB34 Gm45041-201ENSMUST00000207366 3108 ntBASIC11.09□□□□□ -0.63
Chmp2aQ9DB34 Gm26660-202ENSMUST00000223620 4112 ntBASIC11.09□□□□□ -0.63
Chmp2aQ9DB34 Ubap2l-215ENSMUST00000198322 3385 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Chmp2aQ9DB34 Mknk1-202ENSMUST00000106513 2552 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Chmp2aQ9DB34 Gm5697-201ENSMUST00000122295 2482 ntBASIC11.09□□□□□ -0.63
Chmp2aQ9DB34 Btnl1-201ENSMUST00000080254 1861 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
Chmp2aQ9DB34 Txndc9-208ENSMUST00000195247 1699 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Chmp2aQ9DB34 Fbp2-201ENSMUST00000021907 1354 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Chmp2aQ9DB34 Zdhhc21-202ENSMUST00000107239 1148 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Chmp2aQ9DB34 Lypla1-202ENSMUST00000115529 930 ntTSL 2 BASIC11.09□□□□□ -0.63
Chmp2aQ9DB34 Saxo2-202ENSMUST00000126478 430 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Chmp2aQ9DB34 Gm16288-201ENSMUST00000137940 367 ntBASIC11.09□□□□□ -0.63
Chmp2aQ9DB34 Atad3aos-202ENSMUST00000150777 650 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Chmp2aQ9DB34 Gm37988-201ENSMUST00000155020 825 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
Chmp2aQ9DB34 Gm16587-201ENSMUST00000161943 863 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Chmp2aQ9DB34 Gm17135-201ENSMUST00000167009 564 ntTSL 3 BASIC11.09□□□□□ -0.63
Chmp2aQ9DB34 Gm18733-202ENSMUST00000174447 401 ntBASIC11.09□□□□□ -0.63
Chmp2aQ9DB34 Gm16755-201ENSMUST00000180595 933 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Chmp2aQ9DB34 Tcstv1-202ENSMUST00000190512 875 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Chmp2aQ9DB34 Ghrl-204ENSMUST00000203770 891 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
Chmp2aQ9DB34 Gm11634-202ENSMUST00000209862 573 ntAPPRIS P5 TSL 5 BASIC11.09□□□□□ -0.63
Chmp2aQ9DB34 Gm45388-201ENSMUST00000209922 1132 ntTSL 5 BASIC11.09□□□□□ -0.63
Chmp2aQ9DB34 Chordc1-202ENSMUST00000213605 519 ntTSL 2 BASIC11.09□□□□□ -0.63
Chmp2aQ9DB34 Gm19990-201ENSMUST00000219468 1224 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Chmp2aQ9DB34 Gstz1-203ENSMUST00000220574 971 ntTSL 2 BASIC11.09□□□□□ -0.63
Chmp2aQ9DB34 CT025551.1-201ENSMUST00000223996 692 ntBASIC11.09□□□□□ -0.63
Chmp2aQ9DB34 Gmip-202ENSMUST00000123453 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Chmp2aQ9DB34 Taf3-204ENSMUST00000114909 4897 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Chmp2aQ9DB34 Gm9466-201ENSMUST00000218144 2246 ntBASIC11.09□□□□□ -0.63
Chmp2aQ9DB34 Gm42833-201ENSMUST00000196019 2124 ntBASIC11.09□□□□□ -0.63
Chmp2aQ9DB34 D630029K05Rik-201ENSMUST00000033651 2133 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Chmp2aQ9DB34 Trim16-202ENSMUST00000072639 1929 ntTSL 2 BASIC11.09□□□□□ -0.63
Chmp2aQ9DB34 Rufy4-202ENSMUST00000127134 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Chmp2aQ9DB34 Ppef2-202ENSMUST00000201130 2878 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Chmp2aQ9DB34 Gm42858-201ENSMUST00000202512 1704 ntBASIC11.09□□□□□ -0.63
Chmp2aQ9DB34 Epb41-204ENSMUST00000105970 5059 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
Chmp2aQ9DB34 Mei4-203ENSMUST00000189832 2578 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Chmp2aQ9DB34 Gm15965-201ENSMUST00000123318 1428 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Chmp2aQ9DB34 Gm11571-201ENSMUST00000136820 2396 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Chmp2aQ9DB34 5330413D20Rik-201ENSMUST00000208649 1416 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Chmp2aQ9DB34 Zfp1-202ENSMUST00000211926 1409 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Chmp2aQ9DB34 Spata33-207ENSMUST00000212760 4074 ntBASIC11.09□□□□□ -0.63
Chmp2aQ9DB34 Pigc-201ENSMUST00000028021 2196 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Chmp2aQ9DB34 Asb3-202ENSMUST00000117883 2509 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Chmp2aQ9DB34 Lrrk1-201ENSMUST00000015277 7465 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Chmp2aQ9DB34 AC124577.2-201ENSMUST00000217413 2420 ntBASIC11.08□□□□□ -0.64
Chmp2aQ9DB34 Gm45124-201ENSMUST00000206723 2755 ntBASIC11.08□□□□□ -0.64
Chmp2aQ9DB34 Gm10699-201ENSMUST00000098916 2130 ntBASIC11.08□□□□□ -0.64
Chmp2aQ9DB34 Cdc7-204ENSMUST00000118261 3129 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
Chmp2aQ9DB34 Sirpa-204ENSMUST00000103203 3674 ntAPPRIS P3 TSL 5 BASIC11.08□□□□□ -0.64
Chmp2aQ9DB34 Olfr1219-204ENSMUST00000215225 5865 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
Chmp2aQ9DB34 Irf9-202ENSMUST00000130697 2459 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
Chmp2aQ9DB34 Enpp7-201ENSMUST00000092373 1370 ntAPPRIS P2 TSL 2 BASIC11.08□□□□□ -0.64
Chmp2aQ9DB34 Dmrtc1b-201ENSMUST00000101324 1200 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
Chmp2aQ9DB34 Dmrtc1b-202ENSMUST00000113609 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Chmp2aQ9DB34 Gm13022-201ENSMUST00000121181 285 ntBASIC11.08□□□□□ -0.64
Chmp2aQ9DB34 Gm12745-201ENSMUST00000121767 214 ntBASIC11.08□□□□□ -0.64
Chmp2aQ9DB34 BB557941-201ENSMUST00000126549 1097 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Chmp2aQ9DB34 Stk33-205ENSMUST00000141210 949 ntTSL 3 BASIC11.08□□□□□ -0.64
Chmp2aQ9DB34 1700084F23Rik-202ENSMUST00000188461 747 ntTSL 3 BASIC11.08□□□□□ -0.64
Chmp2aQ9DB34 Gm28760-202ENSMUST00000190376 481 ntTSL 5 BASIC11.08□□□□□ -0.64
Chmp2aQ9DB34 Gm38321-201ENSMUST00000195053 235 ntBASIC11.08□□□□□ -0.64
Chmp2aQ9DB34 Gm43969-201ENSMUST00000204833 535 ntBASIC11.08□□□□□ -0.64
Chmp2aQ9DB34 Gm6390-201ENSMUST00000215034 589 ntBASIC11.08□□□□□ -0.64
Chmp2aQ9DB34 Gm8170-201ENSMUST00000218581 945 ntBASIC11.08□□□□□ -0.64
Chmp2aQ9DB34 AC124581.2-201ENSMUST00000225459 282 ntBASIC11.08□□□□□ -0.64
Chmp2aQ9DB34 AC130477.1-201ENSMUST00000226982 420 ntBASIC11.08□□□□□ -0.64
Chmp2aQ9DB34 Myf6-201ENSMUST00000044210 1263 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Chmp2aQ9DB34 Gm25517-201ENSMUST00000083865 134 ntBASIC11.08□□□□□ -0.64
Chmp2aQ9DB34 Aven-202ENSMUST00000099588 791 ntAPPRIS ALT2 TSL 3 BASIC11.08□□□□□ -0.64
Chmp2aQ9DB34 AC174678.2-201ENSMUST00000156420 3275 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
Chmp2aQ9DB34 Ywhaz-201ENSMUST00000022894 3288 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Chmp2aQ9DB34 9530026P05Rik-204ENSMUST00000204449 1740 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Chmp2aQ9DB34 Frmd4b-201ENSMUST00000032146 3159 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Chmp2aQ9DB34 Ly6e-202ENSMUST00000169343 2154 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
Chmp2aQ9DB34 Hs1bp3-201ENSMUST00000020927 2959 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 48.3 ms