Protein–RNA interactions for Protein: Q9D7F7

Chmp4c, Charged multivesicular body protein 4c, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp4cQ9D7F7 Fam168a-204ENSMUST00000207564 1083 ntTSL 5 BASIC12.68□□□□□ -0.38
Chmp4cQ9D7F7 Gm44753-202ENSMUST00000208297 562 ntTSL 5 BASIC12.68□□□□□ -0.38
Chmp4cQ9D7F7 6430531B16Rik-204ENSMUST00000209335 898 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Chmp4cQ9D7F7 Gm9102-201ENSMUST00000219250 465 ntBASIC12.68□□□□□ -0.38
Chmp4cQ9D7F7 AC124581.2-201ENSMUST00000225459 282 ntBASIC12.68□□□□□ -0.38
Chmp4cQ9D7F7 Fam212a-201ENSMUST00000048568 1025 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Chmp4cQ9D7F7 Abcg2-202ENSMUST00000114294 2178 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Chmp4cQ9D7F7 Smpd4-218ENSMUST00000170273 2166 ntTSL 5 BASIC12.68□□□□□ -0.38
Chmp4cQ9D7F7 Pax3-201ENSMUST00000004994 3078 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Chmp4cQ9D7F7 Prim2-201ENSMUST00000027312 1975 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Chmp4cQ9D7F7 Plekhg5-201ENSMUST00000084115 4113 ntAPPRIS ALT2 TSL 2 BASIC12.68□□□□□ -0.38
Chmp4cQ9D7F7 Gphn-201ENSMUST00000052472 3570 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Chmp4cQ9D7F7 Suclg2-204ENSMUST00000204224 3367 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Chmp4cQ9D7F7 Gm37583-201ENSMUST00000195460 2487 ntBASIC12.68□□□□□ -0.38
Chmp4cQ9D7F7 Tcn2-206ENSMUST00000109992 1945 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Chmp4cQ9D7F7 Mpp1-202ENSMUST00000114091 1558 ntTSL 2 BASIC12.68□□□□□ -0.38
Chmp4cQ9D7F7 Crocc2-201ENSMUST00000138595 7132 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Chmp4cQ9D7F7 Sdk1-201ENSMUST00000074546 7063 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Chmp4cQ9D7F7 Tnk2os-201ENSMUST00000141256 1392 ntTSL 2 BASIC12.68□□□□□ -0.38
Chmp4cQ9D7F7 Adgrf3-201ENSMUST00000088117 3099 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Chmp4cQ9D7F7 Meox2-201ENSMUST00000041183 2360 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Chmp4cQ9D7F7 Ankrd46-201ENSMUST00000057486 2509 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Chmp4cQ9D7F7 Myt1l-201ENSMUST00000021009 5027 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Chmp4cQ9D7F7 Gm44445-201ENSMUST00000204075 2683 ntBASIC12.67□□□□□ -0.38
Chmp4cQ9D7F7 Ogfod1-202ENSMUST00000093301 5141 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Chmp4cQ9D7F7 St6galnac4-201ENSMUST00000102818 3626 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Chmp4cQ9D7F7 Stk26-201ENSMUST00000033444 3639 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Chmp4cQ9D7F7 Camk2g-202ENSMUST00000080440 3604 ntAPPRIS P4 TSL 1 (best) BASIC12.67□□□□□ -0.38
Chmp4cQ9D7F7 Cd300lg-202ENSMUST00000107163 2605 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Chmp4cQ9D7F7 Hmgcr-201ENSMUST00000022176 4425 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Chmp4cQ9D7F7 Usp4-209ENSMUST00000194959 3436 ntAPPRIS ALT1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Chmp4cQ9D7F7 B630019A10Rik-201ENSMUST00000149488 2407 ntTSL 2 BASIC12.67□□□□□ -0.38
Chmp4cQ9D7F7 Hist1h2bk-201ENSMUST00000110455 476 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
Chmp4cQ9D7F7 Gsto2-202ENSMUST00000120645 1277 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Chmp4cQ9D7F7 Gm10631-201ENSMUST00000153288 494 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Chmp4cQ9D7F7 Gm16938-201ENSMUST00000180517 464 ntTSL 5 BASIC12.67□□□□□ -0.38
Chmp4cQ9D7F7 Gm44696-201ENSMUST00000181943 1229 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Chmp4cQ9D7F7 Gm42816-201ENSMUST00000198433 325 ntBASIC12.67□□□□□ -0.38
Chmp4cQ9D7F7 Gm42997-202ENSMUST00000200321 985 ntBASIC12.67□□□□□ -0.38
Chmp4cQ9D7F7 Gadd45a-206ENSMUST00000204282 460 ntTSL 5 BASIC12.67□□□□□ -0.38
Chmp4cQ9D7F7 Cdipt-204ENSMUST00000206346 806 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Chmp4cQ9D7F7 Fxyd1-217ENSMUST00000206860 594 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Chmp4cQ9D7F7 Gm45592-201ENSMUST00000209605 1043 ntBASIC12.67□□□□□ -0.38
Chmp4cQ9D7F7 9530020I12Rik-203ENSMUST00000219371 819 ntTSL 3 BASIC12.67□□□□□ -0.38
Chmp4cQ9D7F7 AC135469.1-201ENSMUST00000225984 772 ntBASIC12.67□□□□□ -0.38
Chmp4cQ9D7F7 Catsperz-201ENSMUST00000057716 781 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Chmp4cQ9D7F7 Gm4763-201ENSMUST00000081657 882 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Chmp4cQ9D7F7 Lst1-201ENSMUST00000097336 415 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Chmp4cQ9D7F7 Pds5a-201ENSMUST00000031104 4146 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Chmp4cQ9D7F7 Kit-201ENSMUST00000005815 5214 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Chmp4cQ9D7F7 Rrm2b-201ENSMUST00000022901 4561 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Chmp4cQ9D7F7 Dysf-202ENSMUST00000089595 6613 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Chmp4cQ9D7F7 Pcdhga7-201ENSMUST00000192511 4730 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Chmp4cQ9D7F7 Gm18294-201ENSMUST00000176980 1748 ntBASIC12.67□□□□□ -0.38
Chmp4cQ9D7F7 Olfr707-205ENSMUST00000214112 1735 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Chmp4cQ9D7F7 Zfp775-201ENSMUST00000061720 4083 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Chmp4cQ9D7F7 Thbs3-202ENSMUST00000119084 2993 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Chmp4cQ9D7F7 Sema4g-201ENSMUST00000026225 4548 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Chmp4cQ9D7F7 Tsix-202ENSMUST00000211291 3263 ntTSL 5 BASIC12.67□□□□□ -0.38
Chmp4cQ9D7F7 Gm43143-201ENSMUST00000196083 2023 ntBASIC12.67□□□□□ -0.38
Chmp4cQ9D7F7 P2ry14-206ENSMUST00000197841 2476 ntTSL 5 BASIC12.67□□□□□ -0.38
Chmp4cQ9D7F7 Hapln3-203ENSMUST00000206092 3358 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Chmp4cQ9D7F7 Mut-201ENSMUST00000169611 3675 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Chmp4cQ9D7F7 Ano1-202ENSMUST00000118556 4566 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Chmp4cQ9D7F7 Gm7742-201ENSMUST00000167648 1527 ntBASIC12.67□□□□□ -0.38
Chmp4cQ9D7F7 Gm7732-201ENSMUST00000170486 1527 ntBASIC12.67□□□□□ -0.38
Chmp4cQ9D7F7 Gm7740-201ENSMUST00000186171 1527 ntBASIC12.67□□□□□ -0.38
Chmp4cQ9D7F7 Gm7736-201ENSMUST00000096981 1527 ntBASIC12.67□□□□□ -0.38
Chmp4cQ9D7F7 C130026L21Rik-204ENSMUST00000199587 1838 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Chmp4cQ9D7F7 Qrfpr-201ENSMUST00000091227 1839 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Chmp4cQ9D7F7 Gm13437-201ENSMUST00000122434 1981 ntBASIC12.67□□□□□ -0.38
Chmp4cQ9D7F7 Lmo3-207ENSMUST00000163065 2425 ntTSL 3 BASIC12.67□□□□□ -0.38
Chmp4cQ9D7F7 Ccdc33-204ENSMUST00000119665 2552 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Chmp4cQ9D7F7 Tmprss3-202ENSMUST00000114549 2872 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Chmp4cQ9D7F7 Rangap1-202ENSMUST00000170134 3002 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Chmp4cQ9D7F7 Cacna1c-202ENSMUST00000078320 8062 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Chmp4cQ9D7F7 Zfp384-201ENSMUST00000046064 3108 ntTSL 5 BASIC12.66□□□□□ -0.38
Chmp4cQ9D7F7 Zfp474-201ENSMUST00000072666 1930 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Chmp4cQ9D7F7 Git2-203ENSMUST00000112183 4886 ntTSL 5 BASIC12.66□□□□□ -0.38
Chmp4cQ9D7F7 Pex5-203ENSMUST00000112530 3051 ntTSL 5 BASIC12.66□□□□□ -0.38
Chmp4cQ9D7F7 Amer3-201ENSMUST00000052670 4392 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Chmp4cQ9D7F7 Platr4-203ENSMUST00000199155 2161 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Chmp4cQ9D7F7 Ints3-201ENSMUST00000029542 4337 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Chmp4cQ9D7F7 Gm43274-201ENSMUST00000202545 5000 ntBASIC12.66□□□□□ -0.38
Chmp4cQ9D7F7 Ppp1r3c-201ENSMUST00000087321 2719 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Chmp4cQ9D7F7 Arrb2-201ENSMUST00000079056 1443 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Chmp4cQ9D7F7 Tmem126b-201ENSMUST00000032843 2259 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Chmp4cQ9D7F7 Ifna15-201ENSMUST00000102809 573 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
Chmp4cQ9D7F7 Mir1893-201ENSMUST00000122565 83 ntBASIC12.66□□□□□ -0.38
Chmp4cQ9D7F7 AC158605.1-201ENSMUST00000156803 764 ntTSL 3 BASIC12.66□□□□□ -0.38
Chmp4cQ9D7F7 Gm17111-201ENSMUST00000169981 411 ntTSL 3 BASIC12.66□□□□□ -0.38
Chmp4cQ9D7F7 Gm8531-201ENSMUST00000188319 893 ntBASIC12.66□□□□□ -0.38
Chmp4cQ9D7F7 Gm33201-201ENSMUST00000204791 855 ntTSL 3 BASIC12.66□□□□□ -0.38
Chmp4cQ9D7F7 AC164573.1-201ENSMUST00000218616 963 ntTSL 5 BASIC12.66□□□□□ -0.38
Chmp4cQ9D7F7 AC122346.3-201ENSMUST00000223983 306 ntBASIC12.66□□□□□ -0.38
Chmp4cQ9D7F7 AC099645.1-201ENSMUST00000226476 1105 ntBASIC12.66□□□□□ -0.38
Chmp4cQ9D7F7 Gm14267-206ENSMUST00000226870 1209 ntBASIC12.66□□□□□ -0.38
Chmp4cQ9D7F7 Nmi-201ENSMUST00000028314 1291 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Chmp4cQ9D7F7 Tmem220-202ENSMUST00000079077 1147 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Chmp4cQ9D7F7 Gm37516-201ENSMUST00000192593 1954 ntBASIC12.66□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 64.5 ms