Protein–RNA interactions for Protein: Q6P2L7

Casc4, Protein CASC4, mousemouse

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Casc4Q6P2L7 Dcaf12-201ENSMUST00000030145 3442 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Casc4Q6P2L7 Gm38312-201ENSMUST00000195426 1746 ntBASIC10.81□□□□□ -0.68
Casc4Q6P2L7 Mllt10-201ENSMUST00000028076 4917 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Casc4Q6P2L7 4930512J16Rik-201ENSMUST00000203704 1859 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Casc4Q6P2L7 Shroom2-201ENSMUST00000062317 6997 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Casc4Q6P2L7 Ces2h-201ENSMUST00000172032 2445 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.68
Casc4Q6P2L7 Csrnp3-208ENSMUST00000176109 2958 ntAPPRIS ALT2 TSL 5 BASIC10.8□□□□□ -0.68
Casc4Q6P2L7 Inpp4a-202ENSMUST00000058307 2963 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Casc4Q6P2L7 1810014B01Rik-202ENSMUST00000218095 1622 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Casc4Q6P2L7 Gm6124-201ENSMUST00000188240 2580 ntBASIC10.8□□□□□ -0.68
Casc4Q6P2L7 Lingo1-201ENSMUST00000053568 3295 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Casc4Q6P2L7 Agbl4-202ENSMUST00000097920 1798 ntAPPRIS P4 TSL 1 (best) BASIC10.8□□□□□ -0.68
Casc4Q6P2L7 Myo1c-203ENSMUST00000102505 4652 ntAPPRIS ALT1 TSL 5 BASIC10.8□□□□□ -0.68
Casc4Q6P2L7 Mms19-201ENSMUST00000026168 3162 ntAPPRIS ALT2 TSL 5 BASIC10.8□□□□□ -0.68
Casc4Q6P2L7 Rtn4ip1-202ENSMUST00000105492 2059 ntTSL 3 BASIC10.8□□□□□ -0.68
Casc4Q6P2L7 Il17ra-201ENSMUST00000002976 7752 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Casc4Q6P2L7 Cacna1c-202ENSMUST00000078320 8062 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Casc4Q6P2L7 Gm11571-201ENSMUST00000136820 2396 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Casc4Q6P2L7 Atcayos-203ENSMUST00000150782 3057 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Casc4Q6P2L7 Snd1-206ENSMUST00000167201 3781 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Casc4Q6P2L7 Dhdds-209ENSMUST00000144668 3219 ntAPPRIS P2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Casc4Q6P2L7 Slc30a8-201ENSMUST00000037240 1971 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Casc4Q6P2L7 Smim11-202ENSMUST00000118064 782 ntAPPRIS P1 TSL 2 BASIC10.8□□□□□ -0.68
Casc4Q6P2L7 Tnfrsf14-201ENSMUST00000123514 1018 ntAPPRIS P2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Casc4Q6P2L7 Ndufb5-204ENSMUST00000127477 1079 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Casc4Q6P2L7 Gm13802-201ENSMUST00000150159 663 ntTSL 3 BASIC10.8□□□□□ -0.68
Casc4Q6P2L7 Gm5244-201ENSMUST00000164001 339 ntBASIC10.8□□□□□ -0.68
Casc4Q6P2L7 Gm24809-201ENSMUST00000175318 271 ntBASIC10.8□□□□□ -0.68
Casc4Q6P2L7 Mir6958-201ENSMUST00000184207 73 ntBASIC10.8□□□□□ -0.68
Casc4Q6P2L7 Gm28096-201ENSMUST00000191391 824 ntTSL 5 BASIC10.8□□□□□ -0.68
Casc4Q6P2L7 Gm6677-201ENSMUST00000195100 441 ntBASIC10.8□□□□□ -0.68
Casc4Q6P2L7 Gm31274-201ENSMUST00000197356 229 ntBASIC10.8□□□□□ -0.68
Casc4Q6P2L7 E230014E18Rik-201ENSMUST00000215920 859 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Casc4Q6P2L7 Stt3a-209ENSMUST00000217599 285 ntTSL 5 BASIC10.8□□□□□ -0.68
Casc4Q6P2L7 Mcts2-201ENSMUST00000062148 917 ntAPPRIS P1 BASIC10.8□□□□□ -0.68
Casc4Q6P2L7 Gm7536-201ENSMUST00000077389 444 ntBASIC10.8□□□□□ -0.68
Casc4Q6P2L7 Olfr538-201ENSMUST00000084457 933 ntAPPRIS P1 BASIC10.8□□□□□ -0.68
Casc4Q6P2L7 H2-M9-202ENSMUST00000087167 1070 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Casc4Q6P2L7 Kat7-205ENSMUST00000107734 3560 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Casc4Q6P2L7 Gm12799-201ENSMUST00000118151 2560 ntBASIC10.8□□□□□ -0.68
Casc4Q6P2L7 Vangl1-208ENSMUST00000168312 1740 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Casc4Q6P2L7 Trp73-205ENSMUST00000133533 4752 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Casc4Q6P2L7 Car12-202ENSMUST00000085420 3639 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Casc4Q6P2L7 Cyp26b1-205ENSMUST00000205228 4288 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Casc4Q6P2L7 Ppp2r2cos-201ENSMUST00000152862 1491 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Casc4Q6P2L7 Cdc20b-204ENSMUST00000181568 1494 ntAPPRIS ALT2 TSL 5 BASIC10.8□□□□□ -0.68
Casc4Q6P2L7 CT030159.3-201ENSMUST00000222936 1481 ntTSL 5 BASIC10.8□□□□□ -0.68
Casc4Q6P2L7 Capn15-204ENSMUST00000212149 4555 ntAPPRIS P3 TSL 5 BASIC10.8□□□□□ -0.68
Casc4Q6P2L7 Krt34-201ENSMUST00000056362 1609 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Casc4Q6P2L7 Kir3dl2-202ENSMUST00000113108 1932 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Casc4Q6P2L7 Gys1-206ENSMUST00000211150 2681 ntTSL 5 BASIC10.8□□□□□ -0.68
Casc4Q6P2L7 Vrtn-203ENSMUST00000167227 3440 ntAPPRIS P1 TSL 3 BASIC10.8□□□□□ -0.68
Casc4Q6P2L7 Atxn1-201ENSMUST00000091628 10569 ntAPPRIS P3 TSL 1 (best) BASIC10.79□□□□□ -0.68
Casc4Q6P2L7 Glb1l2-207ENSMUST00000162702 2555 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Casc4Q6P2L7 Mtch2-202ENSMUST00000111467 2281 ntTSL 5 BASIC10.79□□□□□ -0.68
Casc4Q6P2L7 Lrp2bp-201ENSMUST00000066451 1525 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Casc4Q6P2L7 Abcf3-201ENSMUST00000003319 3090 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Casc4Q6P2L7 Ank3-242ENSMUST00000183261 4999 ntTSL 5 BASIC10.79□□□□□ -0.68
Casc4Q6P2L7 Gm7278-201ENSMUST00000119836 1401 ntBASIC10.79□□□□□ -0.68
Casc4Q6P2L7 Ces2f-203ENSMUST00000212926 1430 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Casc4Q6P2L7 St3gal6-207ENSMUST00000137035 4123 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Casc4Q6P2L7 Tmem56-207ENSMUST00000155309 2230 ntAPPRIS P2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Casc4Q6P2L7 Chp1-202ENSMUST00000119172 3027 ntTSL 2 BASIC10.79□□□□□ -0.68
Casc4Q6P2L7 Gm11554-201ENSMUST00000105056 890 ntAPPRIS P1 BASIC10.79□□□□□ -0.68
Casc4Q6P2L7 Gm11884-201ENSMUST00000131639 641 ntTSL 5 BASIC10.79□□□□□ -0.68
Casc4Q6P2L7 Gm13817-201ENSMUST00000142249 604 ntTSL 3 BASIC10.79□□□□□ -0.68
Casc4Q6P2L7 Gm13267-201ENSMUST00000142787 698 ntTSL 3 BASIC10.79□□□□□ -0.68
Casc4Q6P2L7 Gm11211-201ENSMUST00000143618 359 ntTSL 3 BASIC10.79□□□□□ -0.68
Casc4Q6P2L7 Gm9372-201ENSMUST00000168454 430 ntBASIC10.79□□□□□ -0.68
Casc4Q6P2L7 Isl1-202ENSMUST00000176044 1198 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Casc4Q6P2L7 Gm16740-201ENSMUST00000181819 956 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Casc4Q6P2L7 1700017I07Rik-201ENSMUST00000184823 462 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Casc4Q6P2L7 Gm37852-201ENSMUST00000193027 350 ntBASIC10.79□□□□□ -0.68
Casc4Q6P2L7 Gm20781-201ENSMUST00000193154 693 ntBASIC10.79□□□□□ -0.68
Casc4Q6P2L7 Gm37013-201ENSMUST00000194544 313 ntAPPRIS P1 TSL 5 BASIC10.79□□□□□ -0.68
Casc4Q6P2L7 Gm21736-201ENSMUST00000195399 693 ntBASIC10.79□□□□□ -0.68
Casc4Q6P2L7 C230057A21Rik-202ENSMUST00000195781 600 ntTSL 3 BASIC10.79□□□□□ -0.68
Casc4Q6P2L7 Gm43097-201ENSMUST00000196867 151 ntBASIC10.79□□□□□ -0.68
Casc4Q6P2L7 Rp9-204ENSMUST00000216973 796 ntAPPRIS ALT2 TSL 3 BASIC10.79□□□□□ -0.68
Casc4Q6P2L7 Gm26670-202ENSMUST00000226862 340 ntBASIC10.79□□□□□ -0.68
Casc4Q6P2L7 Psmb7-201ENSMUST00000028083 1160 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Casc4Q6P2L7 Gm4950-201ENSMUST00000091905 618 ntAPPRIS P1 BASIC10.79□□□□□ -0.68
Casc4Q6P2L7 Patz1-207ENSMUST00000134089 1904 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Casc4Q6P2L7 9130227L01Rik-202ENSMUST00000189293 1906 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Casc4Q6P2L7 Bace1-202ENSMUST00000078111 4041 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Casc4Q6P2L7 Tia1-206ENSMUST00000113713 3108 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Casc4Q6P2L7 Ccr6-205ENSMUST00000177568 1334 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Casc4Q6P2L7 Eif2s3y-201ENSMUST00000091197 1836 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Casc4Q6P2L7 Trappc9-202ENSMUST00000089770 4047 ntAPPRIS P4 TSL 1 (best) BASIC10.79□□□□□ -0.68
Casc4Q6P2L7 Kit-201ENSMUST00000005815 5214 ntAPPRIS P3 TSL 1 (best) BASIC10.79□□□□□ -0.68
Casc4Q6P2L7 Pnkd-202ENSMUST00000087225 2859 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Casc4Q6P2L7 Serpinb6a-203ENSMUST00000076532 1504 ntAPPRIS P1 TSL 5 BASIC10.79□□□□□ -0.68
Casc4Q6P2L7 Kyat1-201ENSMUST00000044038 1876 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Casc4Q6P2L7 Ugt1a10-201ENSMUST00000113142 2244 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Casc4Q6P2L7 Mfap3l-204ENSMUST00000161702 2215 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Casc4Q6P2L7 4921513H07Rik-201ENSMUST00000201403 2238 ntBASIC10.78□□□□□ -0.68
Casc4Q6P2L7 Ccdc93-201ENSMUST00000036025 7274 ntAPPRIS P4 TSL 1 (best) BASIC10.78□□□□□ -0.68
Casc4Q6P2L7 Tnk2-207ENSMUST00000115126 4358 ntTSL 5 BASIC10.78□□□□□ -0.68
Casc4Q6P2L7 Ddx21-201ENSMUST00000045866 4722 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Casc4Q6P2L7 Picalm-201ENSMUST00000049537 3528 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 71.7 ms