Protein–RNA interactions for Protein: Q3MI99

Ccbe1, Collagen and calcium-binding EGF domain-containing protein 1, mousemouse

Predictions only

Length 408 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccbe1Q3MI99 Blvrb-201ENSMUST00000037399 1028 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Ccbe1Q3MI99 Lce3d-201ENSMUST00000059053 491 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Ccbe1Q3MI99 Asb8-201ENSMUST00000059112 1049 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Ccbe1Q3MI99 Slc7a9-202ENSMUST00000118383 1869 ntAPPRIS P1 TSL 5 BASIC9.65□□□□□ -0.86
Ccbe1Q3MI99 Gm26902-201ENSMUST00000181307 3100 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Ccbe1Q3MI99 Olfr450-202ENSMUST00000218832 1899 ntAPPRIS P1 TSL 5 BASIC9.65□□□□□ -0.86
Ccbe1Q3MI99 Tusc5-201ENSMUST00000062024 3302 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Ccbe1Q3MI99 Fubp1-201ENSMUST00000106121 4525 ntAPPRIS P2 TSL 2 BASIC9.65□□□□□ -0.86
Ccbe1Q3MI99 Ndrg4-202ENSMUST00000073139 2966 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.87
Ccbe1Q3MI99 Cpeb1-209ENSMUST00000178892 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC9.65□□□□□ -0.87
Ccbe1Q3MI99 Fam124b-201ENSMUST00000058748 2855 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.87
Ccbe1Q3MI99 Gm16576-201ENSMUST00000128342 5404 ntTSL 1 (best) BASIC9.65□□□□□ -0.87
Ccbe1Q3MI99 Srpx2-202ENSMUST00000113304 2848 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Ccbe1Q3MI99 Irx3os-203ENSMUST00000133528 1354 ntTSL 5 BASIC9.64□□□□□ -0.87
Ccbe1Q3MI99 Gm18637-201ENSMUST00000217665 1900 ntBASIC9.64□□□□□ -0.87
Ccbe1Q3MI99 Cyp2g1-201ENSMUST00000040944 1896 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Ccbe1Q3MI99 Kcne4-201ENSMUST00000057262 2657 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Ccbe1Q3MI99 Gm43776-201ENSMUST00000199729 2914 ntBASIC9.64□□□□□ -0.87
Ccbe1Q3MI99 Gm44541-201ENSMUST00000207837 2907 ntBASIC9.64□□□□□ -0.87
Ccbe1Q3MI99 Crry-ps-201ENSMUST00000079090 1309 ntBASIC9.64□□□□□ -0.87
Ccbe1Q3MI99 Gm16536-201ENSMUST00000162209 1589 ntBASIC9.64□□□□□ -0.87
Ccbe1Q3MI99 Eftud2-212ENSMUST00000173679 2889 ntTSL 5 BASIC9.64□□□□□ -0.87
Ccbe1Q3MI99 Rap1gds1-201ENSMUST00000029796 3383 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Ccbe1Q3MI99 Srp54b-201ENSMUST00000164243 2317 ntAPPRIS P1 TSL 5 BASIC9.64□□□□□ -0.87
Ccbe1Q3MI99 Lnpk-203ENSMUST00000111993 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC9.64□□□□□ -0.87
Ccbe1Q3MI99 Gm23270-201ENSMUST00000104055 131 ntBASIC9.64□□□□□ -0.87
Ccbe1Q3MI99 Tmem50a-202ENSMUST00000105863 719 ntAPPRIS P1 TSL 3 BASIC9.64□□□□□ -0.87
Ccbe1Q3MI99 Myl4-202ENSMUST00000106956 900 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Ccbe1Q3MI99 Gngt2-207ENSMUST00000107714 558 ntAPPRIS P1 TSL 3 BASIC9.64□□□□□ -0.87
Ccbe1Q3MI99 Tpm1-210ENSMUST00000113693 1054 ntTSL 5 BASIC9.64□□□□□ -0.87
Ccbe1Q3MI99 Zscan10-203ENSMUST00000117606 891 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Ccbe1Q3MI99 Gm12953-201ENSMUST00000138426 751 ntTSL 2 BASIC9.64□□□□□ -0.87
Ccbe1Q3MI99 4930483J18Rik-202ENSMUST00000138715 1093 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Ccbe1Q3MI99 Gm13660-201ENSMUST00000142828 722 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Ccbe1Q3MI99 Gm15829-201ENSMUST00000145415 869 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Ccbe1Q3MI99 Gm11915-201ENSMUST00000153669 358 ntTSL 5 BASIC9.64□□□□□ -0.87
Ccbe1Q3MI99 Gnpda2-207ENSMUST00000173927 1011 ntAPPRIS ALT1 TSL 5 BASIC9.64□□□□□ -0.87
Ccbe1Q3MI99 Gm7696-201ENSMUST00000174727 907 ntBASIC9.64□□□□□ -0.87
Ccbe1Q3MI99 Mrip-ps-201ENSMUST00000184613 940 ntBASIC9.64□□□□□ -0.87
Ccbe1Q3MI99 Gm29283-201ENSMUST00000187394 288 ntTSL 5 BASIC9.64□□□□□ -0.87
Ccbe1Q3MI99 Myl4-201ENSMUST00000018800 879 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Ccbe1Q3MI99 Gm31256-201ENSMUST00000194705 506 ntBASIC9.64□□□□□ -0.87
Ccbe1Q3MI99 Gm44551-201ENSMUST00000208804 171 ntBASIC9.64□□□□□ -0.87
Ccbe1Q3MI99 Bet1l-207ENSMUST00000211527 298 ntTSL 5 BASIC9.64□□□□□ -0.87
Ccbe1Q3MI99 Cplx3-203ENSMUST00000217015 540 ntTSL 2 BASIC9.64□□□□□ -0.87
Ccbe1Q3MI99 Nsd1-205ENSMUST00000224693 852 ntBASIC9.64□□□□□ -0.87
Ccbe1Q3MI99 Rpl10a-201ENSMUST00000042334 829 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Ccbe1Q3MI99 Cox17-201ENSMUST00000050273 444 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Ccbe1Q3MI99 Fmr1nb-202ENSMUST00000071848 842 ntAPPRIS P3 TSL 1 (best) BASIC9.64□□□□□ -0.87
Ccbe1Q3MI99 Hcst-201ENSMUST00000075062 442 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Ccbe1Q3MI99 Ifi27-205ENSMUST00000085065 977 ntAPPRIS ALT2 TSL 1 (best) BASIC9.64□□□□□ -0.87
Ccbe1Q3MI99 Gm38116-201ENSMUST00000193873 1533 ntBASIC9.64□□□□□ -0.87
Ccbe1Q3MI99 Trim6-206ENSMUST00000214578 1506 ntTSL 5 BASIC9.64□□□□□ -0.87
Ccbe1Q3MI99 Slc13a5-206ENSMUST00000208912 1751 ntAPPRIS ALT2 TSL 5 BASIC9.64□□□□□ -0.87
Ccbe1Q3MI99 AC153524.2-202ENSMUST00000220401 1794 ntBASIC9.64□□□□□ -0.87
Ccbe1Q3MI99 Krt222-201ENSMUST00000038214 2042 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Ccbe1Q3MI99 Sytl4-202ENSMUST00000113294 2958 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Ccbe1Q3MI99 Glp2r-201ENSMUST00000021289 1738 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Ccbe1Q3MI99 Sh3gl3-206ENSMUST00000179318 1489 ntTSL 5 BASIC9.64□□□□□ -0.87
Ccbe1Q3MI99 Henmt1-205ENSMUST00000196533 1491 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Ccbe1Q3MI99 Gm29660-201ENSMUST00000185631 2166 ntTSL 5 BASIC9.64□□□□□ -0.87
Ccbe1Q3MI99 Gm29309-201ENSMUST00000186251 2166 ntTSL 5 BASIC9.64□□□□□ -0.87
Ccbe1Q3MI99 Gm28317-201ENSMUST00000187200 2166 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Ccbe1Q3MI99 Gm28254-201ENSMUST00000189207 2166 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Ccbe1Q3MI99 Gm29063-201ENSMUST00000190236 2166 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Ccbe1Q3MI99 Gm29632-201ENSMUST00000190335 2166 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Ccbe1Q3MI99 Gm28538-201ENSMUST00000190919 2166 ntTSL 5 BASIC9.64□□□□□ -0.87
Ccbe1Q3MI99 Apex2-205ENSMUST00000112725 3613 ntTSL 5 BASIC9.64□□□□□ -0.87
Ccbe1Q3MI99 Pld1-201ENSMUST00000067757 4804 ntAPPRIS P2 TSL 1 (best) BASIC9.64□□□□□ -0.87
Ccbe1Q3MI99 Myo1h-201ENSMUST00000124316 2877 ntAPPRIS ALT2 TSL 5 BASIC9.64□□□□□ -0.87
Ccbe1Q3MI99 Ttpal-207ENSMUST00000171696 4522 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Ccbe1Q3MI99 Odf2-208ENSMUST00000113763 2364 ntAPPRIS P3 TSL 5 BASIC9.64□□□□□ -0.87
Ccbe1Q3MI99 Itsn1-204ENSMUST00000113993 3787 ntTSL 5 BASIC9.64□□□□□ -0.87
Ccbe1Q3MI99 Meis2-203ENSMUST00000102538 2810 ntAPPRIS P3 TSL 1 (best) BASIC9.64□□□□□ -0.87
Ccbe1Q3MI99 Meis2-201ENSMUST00000028639 2831 ntAPPRIS ALT1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Ccbe1Q3MI99 BC025920-202ENSMUST00000119492 1895 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Ccbe1Q3MI99 Lrrc71-201ENSMUST00000023846 3988 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Ccbe1Q3MI99 Tmem39a-204ENSMUST00000163884 1645 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Ccbe1Q3MI99 Tmem176b-202ENSMUST00000164733 1648 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Ccbe1Q3MI99 Lpar1-202ENSMUST00000107570 3244 ntAPPRIS ALT1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Ccbe1Q3MI99 Akap8-201ENSMUST00000002699 3695 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Ccbe1Q3MI99 Slc3a2-207ENSMUST00000206598 1393 ntTSL 2 BASIC9.63□□□□□ -0.87
Ccbe1Q3MI99 Strn-201ENSMUST00000024881 2967 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Ccbe1Q3MI99 Dysf-202ENSMUST00000089595 6613 ntAPPRIS ALT2 TSL 5 BASIC9.63□□□□□ -0.87
Ccbe1Q3MI99 Slc45a4-207ENSMUST00000151288 7509 ntAPPRIS P2 TSL 1 (best) BASIC9.63□□□□□ -0.87
Ccbe1Q3MI99 Gm6878-201ENSMUST00000100448 2018 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Ccbe1Q3MI99 Cabin1-201ENSMUST00000001712 7417 ntAPPRIS P1 TSL 5 BASIC9.63□□□□□ -0.87
Ccbe1Q3MI99 Bicd1-203ENSMUST00000111513 4049 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Ccbe1Q3MI99 Gm20658-202ENSMUST00000177059 1950 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Ccbe1Q3MI99 Thsd1-203ENSMUST00000162447 3273 ntAPPRIS ALT2 TSL 1 (best) BASIC9.63□□□□□ -0.87
Ccbe1Q3MI99 Ncoa6-202ENSMUST00000109669 2379 ntAPPRIS ALT2 TSL 1 (best) BASIC9.63□□□□□ -0.87
Ccbe1Q3MI99 Morf4l2-213ENSMUST00000166478 1720 ntAPPRIS P1 TSL 2 BASIC9.63□□□□□ -0.87
Ccbe1Q3MI99 Atad5-201ENSMUST00000017694 7272 ntAPPRIS P2 TSL 1 (best) BASIC9.63□□□□□ -0.87
Ccbe1Q3MI99 1810020O05Rik-201ENSMUST00000162547 1047 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Ccbe1Q3MI99 Mir5120-201ENSMUST00000175020 78 ntBASIC9.63□□□□□ -0.87
Ccbe1Q3MI99 Tmem267-202ENSMUST00000176171 880 ntAPPRIS P1 TSL 2 BASIC9.63□□□□□ -0.87
Ccbe1Q3MI99 Gm26956-201ENSMUST00000182176 986 ntBASIC9.63□□□□□ -0.87
Ccbe1Q3MI99 Gm38117-201ENSMUST00000194653 939 ntBASIC9.63□□□□□ -0.87
Ccbe1Q3MI99 Gm5869-201ENSMUST00000200248 1257 ntBASIC9.63□□□□□ -0.87
Ccbe1Q3MI99 Gm30459-201ENSMUST00000206203 1193 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Retrieved 100 of 76,532 protein–RNA pairs in 68.1 ms