Protein–RNA interactions for Protein: P62311

Lsm3, U6 snRNA-associated Sm-like protein LSm3, mousemouse

Known RBP Predictions only

Length 102 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm3P62311 Gm28224-201ENSMUST00000186078 697 ntBASIC9.55□□□□□ -0.88
Lsm3P62311 Gm29001-201ENSMUST00000186177 697 ntBASIC9.55□□□□□ -0.88
Lsm3P62311 Gm28292-201ENSMUST00000186593 697 ntBASIC9.55□□□□□ -0.88
Lsm3P62311 Gm28101-201ENSMUST00000187608 697 ntBASIC9.55□□□□□ -0.88
Lsm3P62311 Gm29076-201ENSMUST00000187689 697 ntBASIC9.55□□□□□ -0.88
Lsm3P62311 Gm28302-201ENSMUST00000187931 697 ntBASIC9.55□□□□□ -0.88
Lsm3P62311 Gm28646-201ENSMUST00000188220 697 ntBASIC9.55□□□□□ -0.88
Lsm3P62311 Gm28205-201ENSMUST00000189177 697 ntBASIC9.55□□□□□ -0.88
Lsm3P62311 Gm29032-201ENSMUST00000189797 697 ntBASIC9.55□□□□□ -0.88
Lsm3P62311 Gm28695-201ENSMUST00000190300 697 ntBASIC9.55□□□□□ -0.88
Lsm3P62311 Gm37448-201ENSMUST00000192795 697 ntBASIC9.55□□□□□ -0.88
Lsm3P62311 Gm38341-201ENSMUST00000195357 515 ntBASIC9.55□□□□□ -0.88
Lsm3P62311 AY036118-201ENSMUST00000200021 923 ntBASIC9.55□□□□□ -0.88
Lsm3P62311 Washc3-201ENSMUST00000020248 1052 ntAPPRIS P3 TSL 1 (best) BASIC9.55□□□□□ -0.88
Lsm3P62311 Olfr284-202ENSMUST00000206647 966 ntBASIC9.55□□□□□ -0.88
Lsm3P62311 Vdac1-201ENSMUST00000020673 891 ntTSL 5 BASIC9.55□□□□□ -0.88
Lsm3P62311 Cox6b1-204ENSMUST00000208838 354 ntTSL 3 BASIC9.55□□□□□ -0.88
Lsm3P62311 Gm7319-201ENSMUST00000210047 778 ntBASIC9.55□□□□□ -0.88
Lsm3P62311 Gm21027-201ENSMUST00000219300 1236 ntBASIC9.55□□□□□ -0.88
Lsm3P62311 Gm18042-201ENSMUST00000219887 790 ntBASIC9.55□□□□□ -0.88
Lsm3P62311 5830428M24Rik-201ENSMUST00000221805 825 ntTSL 2 BASIC9.55□□□□□ -0.88
Lsm3P62311 Kdm4a-201ENSMUST00000050288 3279 ntAPPRIS P3 TSL 1 (best) BASIC9.55□□□□□ -0.88
Lsm3P62311 Uqcc1-204ENSMUST00000109636 2633 ntAPPRIS P2 TSL 1 (best) BASIC9.55□□□□□ -0.88
Lsm3P62311 5430430B14Rik-201ENSMUST00000209427 1630 ntBASIC9.55□□□□□ -0.88
Lsm3P62311 Prkag2-201ENSMUST00000030784 3331 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
Lsm3P62311 Nupl1-202ENSMUST00000041905 3913 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Lsm3P62311 Gm7061-201ENSMUST00000118127 1416 ntBASIC9.55□□□□□ -0.88
Lsm3P62311 Gm9962-202ENSMUST00000186595 1417 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
Lsm3P62311 AC125351.1-201ENSMUST00000221438 2223 ntBASIC9.55□□□□□ -0.88
Lsm3P62311 Rpa1-201ENSMUST00000000767 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC9.55□□□□□ -0.88
Lsm3P62311 Nsd3-201ENSMUST00000084026 9945 ntAPPRIS P2 TSL 2 BASIC9.55□□□□□ -0.88
Lsm3P62311 Map4k4-217ENSMUST00000195636 4082 ntAPPRIS ALT2 TSL 5 BASIC9.55□□□□□ -0.88
Lsm3P62311 Gm16070-201ENSMUST00000127328 5210 ntTSL 2 BASIC9.55□□□□□ -0.88
Lsm3P62311 Ociad1-202ENSMUST00000071081 1311 ntTSL 3 BASIC9.55□□□□□ -0.88
Lsm3P62311 Pfkm-202ENSMUST00000163507 2816 ntAPPRIS P1 TSL 5 BASIC9.55□□□□□ -0.88
Lsm3P62311 Lrat-201ENSMUST00000029632 5351 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Lsm3P62311 Mast2-202ENSMUST00000106484 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC9.54□□□□□ -0.88
Lsm3P62311 Zfp532-208ENSMUST00000182852 5476 ntAPPRIS P1 TSL 5 BASIC9.54□□□□□ -0.88
Lsm3P62311 Ubox5-201ENSMUST00000028761 3731 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Lsm3P62311 Zfp74-204ENSMUST00000108212 2060 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
Lsm3P62311 Gm5592-201ENSMUST00000097044 3033 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Lsm3P62311 Bckdk-207ENSMUST00000206745 1702 ntTSL 5 BASIC9.54□□□□□ -0.88
Lsm3P62311 Gm42587-201ENSMUST00000198462 1981 ntBASIC9.54□□□□□ -0.88
Lsm3P62311 BC005624-201ENSMUST00000028205 1984 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Lsm3P62311 Gm16059-201ENSMUST00000135583 3778 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
Lsm3P62311 Vps8-205ENSMUST00000118138 3060 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
Lsm3P62311 Ctnnd1-211ENSMUST00000111685 5985 ntTSL 5 BASIC9.54□□□□□ -0.88
Lsm3P62311 Ctnnd1-215ENSMUST00000111689 5961 ntTSL 5 BASIC9.54□□□□□ -0.88
Lsm3P62311 Ngf-202ENSMUST00000106925 1187 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
Lsm3P62311 Ndufb5-204ENSMUST00000127477 1079 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Lsm3P62311 Mrpl20-202ENSMUST00000130188 442 ntTSL 3 BASIC9.54□□□□□ -0.88
Lsm3P62311 Gm15486-201ENSMUST00000135147 604 ntTSL 3 BASIC9.54□□□□□ -0.88
Lsm3P62311 Gm17150-201ENSMUST00000165577 381 ntBASIC9.54□□□□□ -0.88
Lsm3P62311 Spaca6-209ENSMUST00000172097 1073 ntAPPRIS P1 TSL 5 BASIC9.54□□□□□ -0.88
Lsm3P62311 1700122O11Rik-201ENSMUST00000178823 771 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Lsm3P62311 Gm17586-201ENSMUST00000181502 908 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
Lsm3P62311 Gsg1l2-202ENSMUST00000181566 1158 ntAPPRIS P1 TSL 5 BASIC9.54□□□□□ -0.88
Lsm3P62311 Ighv5-7-201ENSMUST00000192302 244 ntBASIC9.54□□□□□ -0.88
Lsm3P62311 Ldha-213ENSMUST00000210631 685 ntTSL 5 BASIC9.54□□□□□ -0.88
Lsm3P62311 Gm33104-201ENSMUST00000214178 1010 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
Lsm3P62311 Gm19309-201ENSMUST00000218295 205 ntBASIC9.54□□□□□ -0.88
Lsm3P62311 Gm270-201ENSMUST00000223010 976 ntBASIC9.54□□□□□ -0.88
Lsm3P62311 AC151275.1-201ENSMUST00000224870 585 ntBASIC9.54□□□□□ -0.88
Lsm3P62311 Rassf8-202ENSMUST00000058538 1131 ntBASIC9.54□□□□□ -0.88
Lsm3P62311 Nme8-202ENSMUST00000091763 2122 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Lsm3P62311 Xdh-201ENSMUST00000024866 4587 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Lsm3P62311 Hspa14-201ENSMUST00000027961 1795 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Lsm3P62311 4930570G19Rik-201ENSMUST00000139363 3112 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
Lsm3P62311 Crem-233ENSMUST00000154135 2530 ntTSL 5 BASIC9.54□□□□□ -0.88
Lsm3P62311 Slc26a1-202ENSMUST00000119270 3031 ntAPPRIS ALT2 TSL 1 (best) BASIC9.54□□□□□ -0.88
Lsm3P62311 Slc26a1-204ENSMUST00000163328 3015 ntAPPRIS P3 TSL 1 (best) BASIC9.54□□□□□ -0.88
Lsm3P62311 Arhgef10l-204ENSMUST00000105797 3507 ntTSL 5 BASIC9.54□□□□□ -0.88
Lsm3P62311 Zfp185-201ENSMUST00000114546 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC9.54□□□□□ -0.88
Lsm3P62311 Rbm19-201ENSMUST00000031590 4010 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Lsm3P62311 D030018L15Rik-203ENSMUST00000140253 2902 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
Lsm3P62311 Txndc16-209ENSMUST00000153383 3691 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
Lsm3P62311 Stau1-202ENSMUST00000109235 3569 ntAPPRIS ALT2 TSL 1 (best) BASIC9.54□□□□□ -0.88
Lsm3P62311 Zfp469-202ENSMUST00000187142 3082 ntBASIC9.54□□□□□ -0.88
Lsm3P62311 Adgrf4-201ENSMUST00000024711 3060 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Lsm3P62311 Gm45139-201ENSMUST00000206543 2057 ntBASIC9.54□□□□□ -0.88
Lsm3P62311 Pde10a-211ENSMUST00000149440 4897 ntAPPRIS ALT2 TSL 1 (best) BASIC9.54□□□□□ -0.88
Lsm3P62311 Slc27a6-201ENSMUST00000025500 2485 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Lsm3P62311 4930451G09Rik-201ENSMUST00000090457 2206 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Lsm3P62311 Myt1l-205ENSMUST00000218583 4522 ntAPPRIS ALT2 TSL 1 (best) BASIC9.54□□□□□ -0.88
Lsm3P62311 Gab3-202ENSMUST00000114104 1705 ntAPPRIS ALT2 TSL 5 BASIC9.53□□□□□ -0.88
Lsm3P62311 Wdr46-ps-201ENSMUST00000200591 1712 ntBASIC9.53□□□□□ -0.88
Lsm3P62311 Slc6a16-203ENSMUST00000213347 2865 ntAPPRIS P5 TSL 5 BASIC9.53□□□□□ -0.88
Lsm3P62311 Pcdhga2-201ENSMUST00000193869 4689 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Lsm3P62311 Gm15604-201ENSMUST00000118350 1456 ntBASIC9.53□□□□□ -0.88
Lsm3P62311 Gm42815-201ENSMUST00000198787 1470 ntBASIC9.53□□□□□ -0.88
Lsm3P62311 Gm43908-201ENSMUST00000205074 1472 ntBASIC9.53□□□□□ -0.88
Lsm3P62311 Apba2-206ENSMUST00000206246 3027 ntAPPRIS ALT2 TSL 5 BASIC9.53□□□□□ -0.88
Lsm3P62311 Gm26574-201ENSMUST00000181876 2141 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Lsm3P62311 Bzw2-201ENSMUST00000020856 1871 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Lsm3P62311 Gm26947-201ENSMUST00000182497 2929 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Lsm3P62311 Nudt13-203ENSMUST00000223663 1633 ntAPPRIS P1 BASIC9.53□□□□□ -0.88
Lsm3P62311 Arhgap21-208ENSMUST00000141298 6339 ntAPPRIS ALT2 TSL 5 BASIC9.53□□□□□ -0.88
Lsm3P62311 Tmem97-201ENSMUST00000103242 1375 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Lsm3P62311 Aff1-201ENSMUST00000031256 8312 ntAPPRIS P4 TSL 5 BASIC9.53□□□□□ -0.88
Lsm3P62311 Cyp2a22-201ENSMUST00000170227 1796 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Retrieved 100 of 76,532 protein–RNA pairs in 67.9 ms