Protein–RNA interactions for Protein: P29595

Nedd8, NEDD8, mousemouse

Predictions only

Length 81 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nedd8P29595 Atg13-201ENSMUST00000028678 3604 ntTSL 5 BASIC9.69□□□□□ -0.86
Nedd8P29595 Txndc12-201ENSMUST00000030296 1359 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Nedd8P29595 Ism2-201ENSMUST00000051601 1350 ntTSL 5 BASIC9.69□□□□□ -0.86
Nedd8P29595 Nup214-201ENSMUST00000065398 6605 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Nedd8P29595 Lgals4-201ENSMUST00000066723 1384 ntAPPRIS P2 TSL 1 (best) BASIC9.69□□□□□ -0.86
Nedd8P29595 Gpatch2l-201ENSMUST00000071106 3829 ntAPPRIS ALT2 TSL 1 (best) BASIC9.69□□□□□ -0.86
Nedd8P29595 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC9.69□□□□□ -0.86
Nedd8P29595 Fbp1-201ENSMUST00000092888 1479 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Nedd8P29595 Nupl1-202ENSMUST00000041905 3913 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Nedd8P29595 Arhgap45-203ENSMUST00000105373 3867 ntAPPRIS ALT2 TSL 1 (best) BASIC9.69□□□□□ -0.86
Nedd8P29595 Celf1-203ENSMUST00000068747 7614 ntAPPRIS ALT1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Nedd8P29595 Pcdhga7-202ENSMUST00000193476 3044 ntAPPRIS ALT2 BASIC9.69□□□□□ -0.86
Nedd8P29595 Tacc2-203ENSMUST00000084513 9029 ntAPPRIS P4 TSL 5 BASIC9.69□□□□□ -0.86
Nedd8P29595 Rpa1-201ENSMUST00000000767 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC9.69□□□□□ -0.86
Nedd8P29595 Odf2-208ENSMUST00000113763 2364 ntAPPRIS P3 TSL 5 BASIC9.68□□□□□ -0.86
Nedd8P29595 Lonp2-203ENSMUST00000122188 2372 ntTSL 2 BASIC9.68□□□□□ -0.86
Nedd8P29595 Gm37798-201ENSMUST00000193026 2169 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Nedd8P29595 Gprin2-203ENSMUST00000226613 10354 ntAPPRIS P1 BASIC9.68□□□□□ -0.86
Nedd8P29595 Gm42587-201ENSMUST00000198462 1981 ntBASIC9.68□□□□□ -0.86
Nedd8P29595 Bcl2l1-206ENSMUST00000140436 1865 ntTSL 2 BASIC9.68□□□□□ -0.86
Nedd8P29595 Bzw2-201ENSMUST00000020856 1871 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Nedd8P29595 Hspa14-201ENSMUST00000027961 1795 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Nedd8P29595 Gm13128-201ENSMUST00000105751 1745 ntAPPRIS P1 TSL 5 BASIC9.68□□□□□ -0.86
Nedd8P29595 Gab3-202ENSMUST00000114104 1705 ntAPPRIS ALT2 TSL 5 BASIC9.68□□□□□ -0.86
Nedd8P29595 Frmd4a-219ENSMUST00000177457 6538 ntAPPRIS ALT2 TSL 5 BASIC9.68□□□□□ -0.86
Nedd8P29595 Myo15-202ENSMUST00000081823 7953 ntAPPRIS ALT2 TSL 5 BASIC9.68□□□□□ -0.86
Nedd8P29595 Ptpn20-201ENSMUST00000022508 3153 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Nedd8P29595 Zfp936-203ENSMUST00000202535 3112 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Nedd8P29595 Zfp469-202ENSMUST00000187142 3082 ntBASIC9.68□□□□□ -0.86
Nedd8P29595 Acbd5-212ENSMUST00000227663 4566 ntAPPRIS ALT2 BASIC9.68□□□□□ -0.86
Nedd8P29595 Igbp1b-201ENSMUST00000054786 1456 ntAPPRIS P1 BASIC9.68□□□□□ -0.86
Nedd8P29595 Prss47-202ENSMUST00000203968 1353 ntAPPRIS P5 TSL 5 BASIC9.68□□□□□ -0.86
Nedd8P29595 AC114008.2-201ENSMUST00000227699 1347 ntBASIC9.68□□□□□ -0.86
Nedd8P29595 Ociad1-202ENSMUST00000071081 1311 ntTSL 3 BASIC9.68□□□□□ -0.86
Nedd8P29595 Zmat3-203ENSMUST00000168566 7672 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Nedd8P29595 Rpl15-203ENSMUST00000100799 802 ntAPPRIS P1 TSL 2 BASIC9.68□□□□□ -0.86
Nedd8P29595 Gm4294-201ENSMUST00000105169 614 ntBASIC9.68□□□□□ -0.86
Nedd8P29595 Gm11736-201ENSMUST00000121468 505 ntBASIC9.68□□□□□ -0.86
Nedd8P29595 Gm15486-201ENSMUST00000135147 604 ntTSL 3 BASIC9.68□□□□□ -0.86
Nedd8P29595 Platr20-202ENSMUST00000143209 937 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Nedd8P29595 Cdpf1-205ENSMUST00000150995 566 ntAPPRIS P1 TSL 3 BASIC9.68□□□□□ -0.86
Nedd8P29595 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC9.68□□□□□ -0.86
Nedd8P29595 Cox6b1-204ENSMUST00000208838 354 ntTSL 3 BASIC9.68□□□□□ -0.86
Nedd8P29595 AC160052.1-201ENSMUST00000213173 1248 ntTSL 5 BASIC9.68□□□□□ -0.86
Nedd8P29595 Ormdl2-204ENSMUST00000219524 724 ntAPPRIS P1 TSL 2 BASIC9.68□□□□□ -0.86
Nedd8P29595 Rassf8-202ENSMUST00000058538 1131 ntBASIC9.68□□□□□ -0.86
Nedd8P29595 Rpl15-201ENSMUST00000079419 883 ntAPPRIS P1 TSL 2 BASIC9.68□□□□□ -0.86
Nedd8P29595 Snd1-206ENSMUST00000167201 3781 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Nedd8P29595 Ctnnd1-207ENSMUST00000111676 5852 ntTSL 5 BASIC9.68□□□□□ -0.86
Nedd8P29595 Grb2-204ENSMUST00000106499 2333 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Nedd8P29595 Ptgr1-201ENSMUST00000030069 2296 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Nedd8P29595 Rap1gds1-201ENSMUST00000029796 3383 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Nedd8P29595 Msln-201ENSMUST00000075884 2114 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Nedd8P29595 Trpm5-201ENSMUST00000009390 4123 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Nedd8P29595 Gpatch1-201ENSMUST00000079693 3065 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Nedd8P29595 Mis18bp1-201ENSMUST00000052201 4017 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Nedd8P29595 D030018L15Rik-203ENSMUST00000140253 2902 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Nedd8P29595 Scn2b-202ENSMUST00000170998 4656 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Nedd8P29595 Gm43660-201ENSMUST00000200956 6548 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Nedd8P29595 Hdac7-207ENSMUST00000120683 3701 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Nedd8P29595 Nr4a2-201ENSMUST00000028166 3568 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Nedd8P29595 Ccrl2-201ENSMUST00000111888 2459 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Nedd8P29595 Adgrf4-201ENSMUST00000024711 3060 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Nedd8P29595 Gcom1-204ENSMUST00000166843 1521 ntAPPRIS ALT2 TSL 5 BASIC9.67□□□□□ -0.86
Nedd8P29595 Prc1-201ENSMUST00000047558 3016 ntAPPRIS ALT1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Nedd8P29595 Rrp8-202ENSMUST00000098148 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC9.67□□□□□ -0.86
Nedd8P29595 Slc6a16-203ENSMUST00000213347 2865 ntAPPRIS P5 TSL 5 BASIC9.67□□□□□ -0.86
Nedd8P29595 Papss1-206ENSMUST00000200527 2811 ntTSL 5 BASIC9.67□□□□□ -0.86
Nedd8P29595 Zfp287-203ENSMUST00000128370 2062 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Nedd8P29595 Gm38005-201ENSMUST00000194845 2745 ntBASIC9.67□□□□□ -0.86
Nedd8P29595 Krba1-208ENSMUST00000203371 4000 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Nedd8P29595 Tec-201ENSMUST00000071944 2659 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Nedd8P29595 Mast2-202ENSMUST00000106484 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC9.67□□□□□ -0.86
Nedd8P29595 Gm23596-201ENSMUST00000104304 132 ntBASIC9.67□□□□□ -0.86
Nedd8P29595 Ccdc163-202ENSMUST00000106462 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC9.67□□□□□ -0.86
Nedd8P29595 Adig-202ENSMUST00000109484 488 ntTSL 2 BASIC9.67□□□□□ -0.86
Nedd8P29595 Prox1os-201ENSMUST00000110279 828 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Nedd8P29595 Olfr1258-202ENSMUST00000111516 936 ntAPPRIS P1 BASIC9.67□□□□□ -0.86
Nedd8P29595 Rbm3-204ENSMUST00000115617 1152 ntAPPRIS P3 TSL 1 (best) BASIC9.67□□□□□ -0.86
Nedd8P29595 Gm13916-201ENSMUST00000117368 628 ntBASIC9.67□□□□□ -0.86
Nedd8P29595 Gm13226-201ENSMUST00000117838 404 ntBASIC9.67□□□□□ -0.86
Nedd8P29595 Gm12579-201ENSMUST00000118040 783 ntBASIC9.67□□□□□ -0.86
Nedd8P29595 Gm11222-201ENSMUST00000119005 738 ntBASIC9.67□□□□□ -0.86
Nedd8P29595 Gm8566-201ENSMUST00000120174 465 ntBASIC9.67□□□□□ -0.86
Nedd8P29595 Zfp629-204ENSMUST00000128731 823 ntTSL 3 BASIC9.67□□□□□ -0.86
Nedd8P29595 Bcas1os1-201ENSMUST00000133586 1239 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Nedd8P29595 C8g-201ENSMUST00000015227 822 ntAPPRIS ALT2 TSL 1 (best) BASIC9.67□□□□□ -0.86
Nedd8P29595 Gm3150-201ENSMUST00000166418 204 ntBASIC9.67□□□□□ -0.86
Nedd8P29595 Gm17019-201ENSMUST00000167908 1162 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Nedd8P29595 Gstt3-203ENSMUST00000173537 687 ntTSL 3 BASIC9.67□□□□□ -0.86
Nedd8P29595 Gm42423-201ENSMUST00000196396 670 ntTSL 3 BASIC9.67□□□□□ -0.86
Nedd8P29595 AY036118-201ENSMUST00000200021 923 ntBASIC9.67□□□□□ -0.86
Nedd8P29595 AC122024.3-201ENSMUST00000217719 294 ntBASIC9.67□□□□□ -0.86
Nedd8P29595 Gm270-201ENSMUST00000223010 976 ntBASIC9.67□□□□□ -0.86
Nedd8P29595 AC151275.1-201ENSMUST00000224870 585 ntBASIC9.67□□□□□ -0.86
Nedd8P29595 AC158982.1-201ENSMUST00000228377 901 ntBASIC9.67□□□□□ -0.86
Nedd8P29595 Hsd17b3-201ENSMUST00000039832 1131 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Nedd8P29595 Adig-201ENSMUST00000059889 632 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Nedd8P29595 Olfr54-201ENSMUST00000072152 942 ntAPPRIS P1 BASIC9.67□□□□□ -0.86
Nedd8P29595 Olfr709-ps1-201ENSMUST00000072368 924 ntAPPRIS P1 BASIC9.67□□□□□ -0.86
Retrieved 100 of 76,532 protein–RNA pairs in 55.9 ms