Protein–RNA interactions for Protein: F6WEU2

Ccdc188, Coiled-coil domain-containing 188, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc188F6WEU2 Gm9951-202ENSMUST00000149618 1772 ntTSL 2 BASIC10.75□□□□□ -0.69
Ccdc188F6WEU2 Gba-201ENSMUST00000077367 1779 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Ccdc188F6WEU2 Ncapd2-201ENSMUST00000043848 4629 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Ccdc188F6WEU2 Pla2g2d-201ENSMUST00000030528 2167 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Ccdc188F6WEU2 Cyp7b1-201ENSMUST00000035625 2166 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Ccdc188F6WEU2 Ttll10-206ENSMUST00000184348 2556 ntAPPRIS ALT2 TSL 5 BASIC10.74□□□□□ -0.69
Ccdc188F6WEU2 Paqr8-203ENSMUST00000187651 1463 ntAPPRIS P1 TSL 5 BASIC10.74□□□□□ -0.69
Ccdc188F6WEU2 Dstyk-201ENSMUST00000045110 6282 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Ccdc188F6WEU2 Gm38194-201ENSMUST00000194529 2211 ntBASIC10.74□□□□□ -0.69
Ccdc188F6WEU2 9330182L06Rik-204ENSMUST00000134991 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Ccdc188F6WEU2 Maml2-202ENSMUST00000159294 6404 ntAPPRIS P1 TSL 5 BASIC10.74□□□□□ -0.69
Ccdc188F6WEU2 Neat1-202ENSMUST00000174287 3004 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Ccdc188F6WEU2 Fam84a-201ENSMUST00000020926 4164 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Ccdc188F6WEU2 Mettl18-201ENSMUST00000045694 1513 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Ccdc188F6WEU2 Kcna10-201ENSMUST00000055064 1913 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Ccdc188F6WEU2 Snx31-203ENSMUST00000161202 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Ccdc188F6WEU2 Tat-201ENSMUST00000001720 2375 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Ccdc188F6WEU2 Gm45743-201ENSMUST00000212701 2795 ntBASIC10.74□□□□□ -0.69
Ccdc188F6WEU2 Gm44663-201ENSMUST00000206898 3150 ntBASIC10.74□□□□□ -0.69
Ccdc188F6WEU2 Gm42521-201ENSMUST00000199190 2040 ntBASIC10.74□□□□□ -0.69
Ccdc188F6WEU2 Gm43362-201ENSMUST00000198192 2470 ntBASIC10.74□□□□□ -0.69
Ccdc188F6WEU2 Npepps-219ENSMUST00000172108 2924 ntAPPRIS ALT2 TSL 5 BASIC10.74□□□□□ -0.69
Ccdc188F6WEU2 Gm44241-201ENSMUST00000203230 1662 ntBASIC10.74□□□□□ -0.69
Ccdc188F6WEU2 Gm45895-201ENSMUST00000212248 1697 ntTSL 5 BASIC10.74□□□□□ -0.69
Ccdc188F6WEU2 Hnrnpk-202ENSMUST00000116403 2970 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Ccdc188F6WEU2 Gm13551-201ENSMUST00000121286 430 ntBASIC10.74□□□□□ -0.69
Ccdc188F6WEU2 Gm13376-201ENSMUST00000128743 448 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Ccdc188F6WEU2 Gm24352-201ENSMUST00000158966 125 ntBASIC10.74□□□□□ -0.69
Ccdc188F6WEU2 Gm24368-201ENSMUST00000175388 106 ntBASIC10.74□□□□□ -0.69
Ccdc188F6WEU2 Gm5652-201ENSMUST00000182336 1008 ntBASIC10.74□□□□□ -0.69
Ccdc188F6WEU2 Gm27241-201ENSMUST00000183517 622 ntTSL 3 BASIC10.74□□□□□ -0.69
Ccdc188F6WEU2 Gm9553-201ENSMUST00000185703 996 ntBASIC10.74□□□□□ -0.69
Ccdc188F6WEU2 Gm29669-201ENSMUST00000188605 881 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Ccdc188F6WEU2 Gm5543-201ENSMUST00000193329 1091 ntBASIC10.74□□□□□ -0.69
Ccdc188F6WEU2 Ucma-205ENSMUST00000195688 554 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Ccdc188F6WEU2 Gm42591-201ENSMUST00000197249 700 ntBASIC10.74□□□□□ -0.69
Ccdc188F6WEU2 Gm43246-201ENSMUST00000197597 564 ntBASIC10.74□□□□□ -0.69
Ccdc188F6WEU2 Fam162b-201ENSMUST00000020064 646 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Ccdc188F6WEU2 Gm2762-206ENSMUST00000202502 335 ntTSL 3 BASIC10.74□□□□□ -0.69
Ccdc188F6WEU2 Gm2762-208ENSMUST00000202976 568 ntTSL 3 BASIC10.74□□□□□ -0.69
Ccdc188F6WEU2 Gm44709-201ENSMUST00000207649 448 ntTSL 5 BASIC10.74□□□□□ -0.69
Ccdc188F6WEU2 Gm18471-201ENSMUST00000208272 452 ntBASIC10.74□□□□□ -0.69
Ccdc188F6WEU2 Gm45780-201ENSMUST00000212089 224 ntBASIC10.74□□□□□ -0.69
Ccdc188F6WEU2 CT030657.4-201ENSMUST00000222177 744 ntBASIC10.74□□□□□ -0.69
Ccdc188F6WEU2 Gm8256-202ENSMUST00000227964 828 ntBASIC10.74□□□□□ -0.69
Ccdc188F6WEU2 Olfr96-201ENSMUST00000078209 1051 ntAPPRIS P1 BASIC10.74□□□□□ -0.69
Ccdc188F6WEU2 Gm26397-201ENSMUST00000083703 134 ntBASIC10.74□□□□□ -0.69
Ccdc188F6WEU2 Olfr1425-201ENSMUST00000087828 939 ntBASIC10.74□□□□□ -0.69
Ccdc188F6WEU2 Olfr1424-201ENSMUST00000087830 942 ntAPPRIS P1 BASIC10.74□□□□□ -0.69
Ccdc188F6WEU2 Npm1-202ENSMUST00000093201 1192 ntTSL 5 BASIC10.74□□□□□ -0.69
Ccdc188F6WEU2 Cdip1-203ENSMUST00000118703 2554 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Ccdc188F6WEU2 Fcgr1-201ENSMUST00000029748 2589 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Ccdc188F6WEU2 Rbm10-202ENSMUST00000082089 2562 ntAPPRIS ALT2 TSL 5 BASIC10.74□□□□□ -0.69
Ccdc188F6WEU2 Smc4-201ENSMUST00000042901 4316 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Ccdc188F6WEU2 Pfn4-204ENSMUST00000219503 4775 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Ccdc188F6WEU2 Cul9-204ENSMUST00000182485 7848 ntAPPRIS P2 TSL 5 BASIC10.74□□□□□ -0.69
Ccdc188F6WEU2 Pprc1-201ENSMUST00000062322 5205 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Ccdc188F6WEU2 Sec14l2-201ENSMUST00000003681 2631 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Ccdc188F6WEU2 Rnf144a-202ENSMUST00000062149 4812 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Ccdc188F6WEU2 Otub2-202ENSMUST00000101094 3228 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Ccdc188F6WEU2 Arid3b-209ENSMUST00000171444 4171 ntAPPRIS P2 TSL 5 BASIC10.74□□□□□ -0.69
Ccdc188F6WEU2 Pacsin1-201ENSMUST00000045896 4190 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Ccdc188F6WEU2 Haus6-201ENSMUST00000070607 6158 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Ccdc188F6WEU2 Rps6kl1-202ENSMUST00000221972 2881 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Ccdc188F6WEU2 Arhgap33-204ENSMUST00000207860 4396 ntAPPRIS P3 TSL 1 (best) BASIC10.74□□□□□ -0.69
Ccdc188F6WEU2 Aqp8-202ENSMUST00000098056 1451 ntAPPRIS P3 TSL 1 (best) BASIC10.74□□□□□ -0.69
Ccdc188F6WEU2 Tfr2-208ENSMUST00000199054 2966 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Ccdc188F6WEU2 Wnt7b-202ENSMUST00000109424 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Ccdc188F6WEU2 Cry2-201ENSMUST00000090559 3976 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Ccdc188F6WEU2 Prpf19-203ENSMUST00000179297 6035 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Ccdc188F6WEU2 Klhl18-201ENSMUST00000068025 4530 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Ccdc188F6WEU2 Actl7a-201ENSMUST00000095079 1513 ntAPPRIS P1 BASIC10.74□□□□□ -0.69
Ccdc188F6WEU2 Ptgr2-207ENSMUST00000146377 2073 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Ccdc188F6WEU2 A530016L24Rik-201ENSMUST00000057465 2636 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Ccdc188F6WEU2 Unk-201ENSMUST00000021116 3735 ntAPPRIS P3 TSL 1 (best) BASIC10.73□□□□□ -0.69
Ccdc188F6WEU2 Pdzk1-203ENSMUST00000107070 2711 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Ccdc188F6WEU2 Rasgef1a-202ENSMUST00000203482 2227 ntAPPRIS P3 TSL 1 (best) BASIC10.73□□□□□ -0.69
Ccdc188F6WEU2 Wdr46-ps-201ENSMUST00000200591 1712 ntBASIC10.73□□□□□ -0.69
Ccdc188F6WEU2 Ttll10-202ENSMUST00000051509 2304 ntAPPRIS P2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Ccdc188F6WEU2 Utp23-203ENSMUST00000137116 2921 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Ccdc188F6WEU2 Gm46339-201ENSMUST00000222720 3539 ntBASIC10.73□□□□□ -0.69
Ccdc188F6WEU2 Bcl7a-201ENSMUST00000031391 4718 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Ccdc188F6WEU2 Camta1-201ENSMUST00000049790 8423 ntAPPRIS P2 TSL 5 BASIC10.73□□□□□ -0.69
Ccdc188F6WEU2 Rims1-206ENSMUST00000115273 6107 ntAPPRIS ALT2 TSL 5 BASIC10.73□□□□□ -0.69
Ccdc188F6WEU2 Npbwr1-201ENSMUST00000044180 3692 ntAPPRIS P1 BASIC10.73□□□□□ -0.69
Ccdc188F6WEU2 Irf9-202ENSMUST00000130697 2459 ntAPPRIS P3 TSL 1 (best) BASIC10.73□□□□□ -0.69
Ccdc188F6WEU2 Kyat1-201ENSMUST00000044038 1876 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Ccdc188F6WEU2 Gm22777-201ENSMUST00000104091 129 ntBASIC10.73□□□□□ -0.69
Ccdc188F6WEU2 Phyhd1-203ENSMUST00000113643 1195 ntTSL 5 BASIC10.73□□□□□ -0.69
Ccdc188F6WEU2 Defa33-201ENSMUST00000120874 426 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Ccdc188F6WEU2 Gm22009-201ENSMUST00000158792 343 ntBASIC10.73□□□□□ -0.69
Ccdc188F6WEU2 Gm9075-201ENSMUST00000168738 794 ntBASIC10.73□□□□□ -0.69
Ccdc188F6WEU2 Defa2-201ENSMUST00000170275 426 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Ccdc188F6WEU2 Gm28676-201ENSMUST00000188990 591 ntTSL 5 BASIC10.73□□□□□ -0.69
Ccdc188F6WEU2 Gm42997-201ENSMUST00000196074 918 ntTSL 3 BASIC10.73□□□□□ -0.69
Ccdc188F6WEU2 Gm45454-201ENSMUST00000211484 455 ntBASIC10.73□□□□□ -0.69
Ccdc188F6WEU2 Gm4657-201ENSMUST00000213839 787 ntTSL 3 BASIC10.73□□□□□ -0.69
Ccdc188F6WEU2 AC124173.1-201ENSMUST00000223701 189 ntBASIC10.73□□□□□ -0.69
Ccdc188F6WEU2 Scp2-ps2-201ENSMUST00000072166 478 ntBASIC10.73□□□□□ -0.69
Ccdc188F6WEU2 Proca1-202ENSMUST00000078099 1254 ntAPPRIS P2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 49.9 ms