Protein–RNA interactions for Protein: Q9JLR1

Sec61a2, Protein transport protein Sec61 subunit alpha isoform 2, mousemouse

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a2Q9JLR1 Trpm1-201ENSMUST00000085222 5711 ntAPPRIS P2 TSL 1 (best) BASIC9.62□□□□□ -0.87
Sec61a2Q9JLR1 Cnr2-202ENSMUST00000097843 3867 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Sec61a2Q9JLR1 Gm26912-201ENSMUST00000180988 1483 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Sec61a2Q9JLR1 Eno3-201ENSMUST00000072841 1454 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Sec61a2Q9JLR1 Ampd2-203ENSMUST00000102638 3650 ntAPPRIS P3 TSL 1 (best) BASIC9.62□□□□□ -0.87
Sec61a2Q9JLR1 Gm16702-201ENSMUST00000181180 2384 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Sec61a2Q9JLR1 5530401A14Rik-201ENSMUST00000021044 1836 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Sec61a2Q9JLR1 Pdpr-201ENSMUST00000039333 4938 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Sec61a2Q9JLR1 Gm25063-201ENSMUST00000104666 94 ntBASIC9.62□□□□□ -0.87
Sec61a2Q9JLR1 Ralyl-202ENSMUST00000108373 267 ntTSL 5 BASIC9.62□□□□□ -0.87
Sec61a2Q9JLR1 Rbm3-205ENSMUST00000115619 969 ntAPPRIS ALT1 TSL 3 BASIC9.62□□□□□ -0.87
Sec61a2Q9JLR1 Tbata-203ENSMUST00000121297 1000 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Sec61a2Q9JLR1 AC158605.1-201ENSMUST00000156803 764 ntTSL 3 BASIC9.62□□□□□ -0.87
Sec61a2Q9JLR1 Gm16938-201ENSMUST00000180517 464 ntTSL 5 BASIC9.62□□□□□ -0.87
Sec61a2Q9JLR1 AU020206-201ENSMUST00000181224 656 ntTSL 2 BASIC9.62□□□□□ -0.87
Sec61a2Q9JLR1 Gm8492-201ENSMUST00000182375 987 ntBASIC9.62□□□□□ -0.87
Sec61a2Q9JLR1 Gm9358-201ENSMUST00000183067 927 ntBASIC9.62□□□□□ -0.87
Sec61a2Q9JLR1 Gm38210-201ENSMUST00000191944 809 ntBASIC9.62□□□□□ -0.87
Sec61a2Q9JLR1 Gm37028-201ENSMUST00000194276 107 ntBASIC9.62□□□□□ -0.87
Sec61a2Q9JLR1 Gm37638-201ENSMUST00000194337 1123 ntBASIC9.62□□□□□ -0.87
Sec61a2Q9JLR1 4933402C05Rik-201ENSMUST00000208189 1035 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Sec61a2Q9JLR1 Gm7600-201ENSMUST00000209657 785 ntBASIC9.62□□□□□ -0.87
Sec61a2Q9JLR1 Gm45410-201ENSMUST00000211331 1093 ntBASIC9.62□□□□□ -0.87
Sec61a2Q9JLR1 1700011B04Rik-204ENSMUST00000220859 422 ntTSL 5 BASIC9.62□□□□□ -0.87
Sec61a2Q9JLR1 AC167364.1-201ENSMUST00000221495 784 ntTSL 5 BASIC9.62□□□□□ -0.87
Sec61a2Q9JLR1 Id2-203ENSMUST00000222667 958 ntBASIC9.62□□□□□ -0.87
Sec61a2Q9JLR1 AC154305.2-201ENSMUST00000225813 901 ntBASIC9.62□□□□□ -0.87
Sec61a2Q9JLR1 n-R5s211-201ENSMUST00000093689 119 ntBASIC9.62□□□□□ -0.87
Sec61a2Q9JLR1 Filip1l-202ENSMUST00000159414 3253 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Sec61a2Q9JLR1 Ywhaz-201ENSMUST00000022894 3288 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Sec61a2Q9JLR1 Pzp-201ENSMUST00000112132 4681 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Sec61a2Q9JLR1 Ikbkb-201ENSMUST00000033939 3580 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Sec61a2Q9JLR1 Gramd1b-213ENSMUST00000211853 2659 ntTSL 5 BASIC9.62□□□□□ -0.87
Sec61a2Q9JLR1 Chp1-202ENSMUST00000119172 3027 ntTSL 2 BASIC9.62□□□□□ -0.87
Sec61a2Q9JLR1 Helz-201ENSMUST00000075012 6218 ntAPPRIS P2 TSL 1 (best) BASIC9.62□□□□□ -0.87
Sec61a2Q9JLR1 Ddx25-201ENSMUST00000034612 6934 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Sec61a2Q9JLR1 Thbd-201ENSMUST00000099270 3723 ntAPPRIS P1 BASIC9.62□□□□□ -0.87
Sec61a2Q9JLR1 Ncoa1-209ENSMUST00000220434 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC9.62□□□□□ -0.87
Sec61a2Q9JLR1 Mfn2-204ENSMUST00000105716 4241 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Sec61a2Q9JLR1 Pcdhgc5-201ENSMUST00000055935 4741 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Sec61a2Q9JLR1 Dcc-201ENSMUST00000073379 4855 ntTSL 5 BASIC9.62□□□□□ -0.87
Sec61a2Q9JLR1 Gm44617-202ENSMUST00000209122 2763 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Sec61a2Q9JLR1 Abhd4-201ENSMUST00000041197 2401 ntAPPRIS P4 TSL 1 (best) BASIC9.62□□□□□ -0.87
Sec61a2Q9JLR1 Gm19027-201ENSMUST00000187291 1355 ntBASIC9.62□□□□□ -0.87
Sec61a2Q9JLR1 Gm43660-201ENSMUST00000200956 6548 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Sec61a2Q9JLR1 Aldoa-202ENSMUST00000087566 1549 ntTSL 5 BASIC9.61□□□□□ -0.87
Sec61a2Q9JLR1 Acsl5-201ENSMUST00000043150 4243 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Sec61a2Q9JLR1 Olfr463-202ENSMUST00000215150 2031 ntAPPRIS P1 TSL 5 BASIC9.61□□□□□ -0.87
Sec61a2Q9JLR1 Arpp21-217ENSMUST00000161412 1687 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Sec61a2Q9JLR1 Gm35021-201ENSMUST00000210105 2329 ntTSL 5 BASIC9.61□□□□□ -0.87
Sec61a2Q9JLR1 Cwc25-202ENSMUST00000107579 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC9.61□□□□□ -0.87
Sec61a2Q9JLR1 Pax5-205ENSMUST00000107827 1315 ntTSL 5 BASIC9.61□□□□□ -0.87
Sec61a2Q9JLR1 Gm16237-201ENSMUST00000156666 1319 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Sec61a2Q9JLR1 Rnf6-206ENSMUST00000161859 3452 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Sec61a2Q9JLR1 Vmn1r38-202ENSMUST00000227493 3486 ntAPPRIS P1 BASIC9.61□□□□□ -0.87
Sec61a2Q9JLR1 Abhd18-201ENSMUST00000108077 3277 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Sec61a2Q9JLR1 4930432L08Rik-201ENSMUST00000132154 1608 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Sec61a2Q9JLR1 Abcf3-201ENSMUST00000003319 3090 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Sec61a2Q9JLR1 Adamts13-202ENSMUST00000102891 4506 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Sec61a2Q9JLR1 Tcp10a-203ENSMUST00000129709 1778 ntAPPRIS P2 TSL 1 (best) BASIC9.61□□□□□ -0.87
Sec61a2Q9JLR1 9130227L01Rik-202ENSMUST00000189293 1906 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Sec61a2Q9JLR1 Lox-202ENSMUST00000171470 4468 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Sec61a2Q9JLR1 Gtf2ird1-204ENSMUST00000100652 3693 ntAPPRIS P4 TSL 1 (best) BASIC9.61□□□□□ -0.87
Sec61a2Q9JLR1 Rest-201ENSMUST00000080359 7004 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Sec61a2Q9JLR1 Ighv10-3-201ENSMUST00000103495 377 ntAPPRIS P1 BASIC9.61□□□□□ -0.87
Sec61a2Q9JLR1 Cav2-202ENSMUST00000115459 974 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Sec61a2Q9JLR1 Sgcg-202ENSMUST00000121148 1298 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Sec61a2Q9JLR1 Gm15486-201ENSMUST00000135147 604 ntTSL 3 BASIC9.61□□□□□ -0.87
Sec61a2Q9JLR1 Gm23153-201ENSMUST00000175323 313 ntBASIC9.61□□□□□ -0.87
Sec61a2Q9JLR1 Dpf3-206ENSMUST00000177959 1298 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Sec61a2Q9JLR1 Gm28215-201ENSMUST00000186146 346 ntTSL 5 BASIC9.61□□□□□ -0.87
Sec61a2Q9JLR1 Gm37319-201ENSMUST00000193500 636 ntBASIC9.61□□□□□ -0.87
Sec61a2Q9JLR1 A930036K24Rik-201ENSMUST00000194146 1200 ntBASIC9.61□□□□□ -0.87
Sec61a2Q9JLR1 Gm37301-201ENSMUST00000195412 568 ntBASIC9.61□□□□□ -0.87
Sec61a2Q9JLR1 Gm38139-201ENSMUST00000195806 704 ntTSL 2 BASIC9.61□□□□□ -0.87
Sec61a2Q9JLR1 Gm9369-201ENSMUST00000196009 733 ntBASIC9.61□□□□□ -0.87
Sec61a2Q9JLR1 Gm42518-201ENSMUST00000196277 938 ntBASIC9.61□□□□□ -0.87
Sec61a2Q9JLR1 Gm43692-201ENSMUST00000198236 1062 ntBASIC9.61□□□□□ -0.87
Sec61a2Q9JLR1 Gm45758-201ENSMUST00000212448 1006 ntBASIC9.61□□□□□ -0.87
Sec61a2Q9JLR1 Gm4811-201ENSMUST00000220879 1220 ntBASIC9.61□□□□□ -0.87
Sec61a2Q9JLR1 CT025618.1-203ENSMUST00000227008 589 ntBASIC9.61□□□□□ -0.87
Sec61a2Q9JLR1 Mnd1-201ENSMUST00000047368 875 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Sec61a2Q9JLR1 Prpf6-203ENSMUST00000136481 3048 ntAPPRIS P1 TSL 5 BASIC9.61□□□□□ -0.87
Sec61a2Q9JLR1 Slc10a1-203ENSMUST00000218342 1411 ntAPPRIS ALT2 TSL 1 (best) BASIC9.61□□□□□ -0.87
Sec61a2Q9JLR1 Gtf2ird1-206ENSMUST00000111244 3461 ntAPPRIS ALT2 TSL 1 (best) BASIC9.61□□□□□ -0.87
Sec61a2Q9JLR1 Rpe65-202ENSMUST00000196999 1863 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Sec61a2Q9JLR1 Kyat1-201ENSMUST00000044038 1876 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Sec61a2Q9JLR1 C2-206ENSMUST00000152417 2157 ntTSL 5 BASIC9.61□□□□□ -0.87
Sec61a2Q9JLR1 Elf4-201ENSMUST00000033429 5847 ntAPPRIS P1 TSL 5 BASIC9.61□□□□□ -0.87
Sec61a2Q9JLR1 Zzef1-201ENSMUST00000069395 11150 ntAPPRIS P2 TSL 5 BASIC9.61□□□□□ -0.87
Sec61a2Q9JLR1 Wdr62-201ENSMUST00000108190 4742 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Sec61a2Q9JLR1 Tulp2-210ENSMUST00000210868 1664 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Sec61a2Q9JLR1 Ccdc130-202ENSMUST00000098578 2119 ntAPPRIS P3 TSL 1 (best) BASIC9.61□□□□□ -0.87
Sec61a2Q9JLR1 Immt-205ENSMUST00000166938 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC9.61□□□□□ -0.87
Sec61a2Q9JLR1 Cd19-201ENSMUST00000032968 2432 ntAPPRIS ALT2 TSL 1 (best) BASIC9.61□□□□□ -0.87
Sec61a2Q9JLR1 Tln2-207ENSMUST00000215784 8330 ntAPPRIS ALT1 TSL 5 BASIC9.61□□□□□ -0.87
Sec61a2Q9JLR1 Ackr2-202ENSMUST00000214340 3015 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Sec61a2Q9JLR1 Lrrc4-201ENSMUST00000062304 3615 ntAPPRIS P1 BASIC9.61□□□□□ -0.87
Sec61a2Q9JLR1 Slc35b4-201ENSMUST00000019143 6253 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Sec61a2Q9JLR1 Syk-202ENSMUST00000118756 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC9.6□□□□□ -0.87
Retrieved 100 of 76,532 protein–RNA pairs in 53.4 ms