Protein–RNA interactions for Protein: Q9ES00

Ube4b, Ubiquitin conjugation factor E4 B, mousemouse

Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube4bQ9ES00 Tmem63c-203ENSMUST00000146292 3455 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Ube4bQ9ES00 Dync1i2-202ENSMUST00000100028 2097 ntTSL 5 BASIC10.16□□□□□ -0.78
Ube4bQ9ES00 Ly75-201ENSMUST00000028362 5172 ntAPPRIS P2 TSL 1 (best) BASIC10.16□□□□□ -0.78
Ube4bQ9ES00 Vps8-206ENSMUST00000118923 4838 ntTSL 5 BASIC10.16□□□□□ -0.78
Ube4bQ9ES00 Prrc1-201ENSMUST00000025490 4801 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Ube4bQ9ES00 Prss47-202ENSMUST00000203968 1353 ntAPPRIS P5 TSL 5 BASIC10.16□□□□□ -0.78
Ube4bQ9ES00 Phf20-201ENSMUST00000037401 5737 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Ube4bQ9ES00 4933438K21Rik-201ENSMUST00000175787 1693 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Ube4bQ9ES00 Gm9129-201ENSMUST00000218173 1689 ntBASIC10.16□□□□□ -0.78
Ube4bQ9ES00 Gm13812-201ENSMUST00000118061 1347 ntBASIC10.16□□□□□ -0.78
Ube4bQ9ES00 Gm13810-201ENSMUST00000118584 1347 ntBASIC10.16□□□□□ -0.78
Ube4bQ9ES00 Gpr156-201ENSMUST00000061274 4581 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Ube4bQ9ES00 Itgam-207ENSMUST00000098015 4803 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Ube4bQ9ES00 Scml4-202ENSMUST00000105494 4166 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Ube4bQ9ES00 Cage1-203ENSMUST00000110233 2875 ntAPPRIS P1 TSL 5 BASIC10.16□□□□□ -0.78
Ube4bQ9ES00 Folr1-202ENSMUST00000106982 1039 ntAPPRIS P1 TSL 3 BASIC10.16□□□□□ -0.78
Ube4bQ9ES00 Rps10-202ENSMUST00000114881 604 ntAPPRIS P1 TSL 3 BASIC10.16□□□□□ -0.78
Ube4bQ9ES00 BC026585-202ENSMUST00000119891 1125 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Ube4bQ9ES00 Gm15891-201ENSMUST00000127307 611 ntTSL 5 BASIC10.16□□□□□ -0.78
Ube4bQ9ES00 Dnajb6-202ENSMUST00000012734 1024 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Ube4bQ9ES00 Pla2g1b-204ENSMUST00000145785 419 ntTSL 5 BASIC10.16□□□□□ -0.78
Ube4bQ9ES00 2010001A14Rik-203ENSMUST00000152790 714 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Ube4bQ9ES00 4930505M18Rik-201ENSMUST00000175854 1288 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Ube4bQ9ES00 Swi5-207ENSMUST00000183946 768 ntAPPRIS P3 TSL 1 (best) BASIC10.16□□□□□ -0.78
Ube4bQ9ES00 Gm29283-201ENSMUST00000187394 288 ntTSL 5 BASIC10.16□□□□□ -0.78
Ube4bQ9ES00 Gm29539-201ENSMUST00000188031 758 ntTSL 3 BASIC10.16□□□□□ -0.78
Ube4bQ9ES00 8030442B05Rik-201ENSMUST00000192626 1035 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Ube4bQ9ES00 Gm43667-201ENSMUST00000198616 1095 ntBASIC10.16□□□□□ -0.78
Ube4bQ9ES00 AC159002.1-201ENSMUST00000226714 924 ntBASIC10.16□□□□□ -0.78
Ube4bQ9ES00 AC133602.1-201ENSMUST00000227510 509 ntBASIC10.16□□□□□ -0.78
Ube4bQ9ES00 Fabp4-201ENSMUST00000029041 896 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Ube4bQ9ES00 1700016D06Rik-201ENSMUST00000033906 1263 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Ube4bQ9ES00 Azgp1-201ENSMUST00000035390 1297 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Ube4bQ9ES00 Sftpd-201ENSMUST00000077136 1275 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Ube4bQ9ES00 Fyco1-201ENSMUST00000084715 7949 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Ube4bQ9ES00 Gm44153-201ENSMUST00000204162 1580 ntBASIC10.16□□□□□ -0.78
Ube4bQ9ES00 Dhdh-201ENSMUST00000011526 5323 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Ube4bQ9ES00 Krt78-201ENSMUST00000164932 3434 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Ube4bQ9ES00 Trim6-206ENSMUST00000214578 1506 ntTSL 5 BASIC10.16□□□□□ -0.78
Ube4bQ9ES00 Xpo7-201ENSMUST00000022696 4472 ntAPPRIS P2 TSL 1 (best) BASIC10.16□□□□□ -0.78
Ube4bQ9ES00 March1-206ENSMUST00000110256 3288 ntTSL 5 BASIC10.16□□□□□ -0.78
Ube4bQ9ES00 Palm2-201ENSMUST00000102904 2958 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Ube4bQ9ES00 Gpr63-201ENSMUST00000038920 2370 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Ube4bQ9ES00 Slc13a5-206ENSMUST00000208912 1751 ntAPPRIS ALT2 TSL 5 BASIC10.16□□□□□ -0.78
Ube4bQ9ES00 Acta2-201ENSMUST00000039631 1781 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Ube4bQ9ES00 Cacna1c-214ENSMUST00000188106 6462 ntAPPRIS ALT2 TSL 1 (best) BASIC10.16□□□□□ -0.78
Ube4bQ9ES00 1700006J14Rik-203ENSMUST00000160091 2629 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Ube4bQ9ES00 S1pr2-201ENSMUST00000054197 6394 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Ube4bQ9ES00 Tubd1-205ENSMUST00000167178 1976 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Ube4bQ9ES00 Gm21358-201ENSMUST00000191645 1659 ntBASIC10.15□□□□□ -0.78
Ube4bQ9ES00 Olfr130-202ENSMUST00000215726 5810 ntAPPRIS P1 TSL 5 BASIC10.15□□□□□ -0.78
Ube4bQ9ES00 Gm9978-201ENSMUST00000069431 3273 ntBASIC10.15□□□□□ -0.78
Ube4bQ9ES00 Ankk1-201ENSMUST00000034792 2714 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Ube4bQ9ES00 Gm32856-201ENSMUST00000212145 3767 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Ube4bQ9ES00 Atg7-201ENSMUST00000032457 3761 ntAPPRIS P3 TSL 1 (best) BASIC10.15□□□□□ -0.78
Ube4bQ9ES00 Nmrk2-201ENSMUST00000005069 1854 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Ube4bQ9ES00 Lnpk-201ENSMUST00000064503 3195 ntAPPRIS P3 TSL 1 (best) BASIC10.15□□□□□ -0.78
Ube4bQ9ES00 Sftpa1-202ENSMUST00000170719 2854 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Ube4bQ9ES00 Frmd6-201ENSMUST00000057859 4662 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Ube4bQ9ES00 Astn1-201ENSMUST00000046110 7195 ntAPPRIS ALT2 TSL 1 (best) BASIC10.15□□□□□ -0.78
Ube4bQ9ES00 Slc25a44-201ENSMUST00000057935 3577 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Ube4bQ9ES00 Ucp3-202ENSMUST00000107059 1260 ntAPPRIS P1 TSL 5 BASIC10.15□□□□□ -0.78
Ube4bQ9ES00 Rps10-203ENSMUST00000114882 614 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Ube4bQ9ES00 Gm12266-201ENSMUST00000120311 962 ntBASIC10.15□□□□□ -0.78
Ube4bQ9ES00 Gm11683-201ENSMUST00000147006 918 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Ube4bQ9ES00 Gm23085-201ENSMUST00000157849 293 ntBASIC10.15□□□□□ -0.78
Ube4bQ9ES00 Ager-207ENSMUST00000173992 1248 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Ube4bQ9ES00 Malat1-205ENSMUST00000174808 656 ntTSL 2 BASIC10.15□□□□□ -0.78
Ube4bQ9ES00 Gm10807-201ENSMUST00000177134 795 ntBASIC10.15□□□□□ -0.78
Ube4bQ9ES00 Ssty2-201ENSMUST00000179136 684 ntAPPRIS P1 BASIC10.15□□□□□ -0.78
Ube4bQ9ES00 Ssty2-202ENSMUST00000190565 1216 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Ube4bQ9ES00 Gm10069-203ENSMUST00000204081 907 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Ube4bQ9ES00 Gm44867-201ENSMUST00000205675 530 ntTSL 3 BASIC10.15□□□□□ -0.78
Ube4bQ9ES00 4930448A20Rik-201ENSMUST00000205988 1034 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Ube4bQ9ES00 Gm45186-201ENSMUST00000206874 478 ntBASIC10.15□□□□□ -0.78
Ube4bQ9ES00 Gm45113-201ENSMUST00000207518 165 ntBASIC10.15□□□□□ -0.78
Ube4bQ9ES00 Gm45575-201ENSMUST00000210283 548 ntBASIC10.15□□□□□ -0.78
Ube4bQ9ES00 AC153830.1-201ENSMUST00000218522 594 ntTSL 5 BASIC10.15□□□□□ -0.78
Ube4bQ9ES00 Rpl17-ps3-201ENSMUST00000221295 556 ntBASIC10.15□□□□□ -0.78
Ube4bQ9ES00 Gm32939-201ENSMUST00000222336 843 ntTSL 3 BASIC10.15□□□□□ -0.78
Ube4bQ9ES00 Olfr450-201ENSMUST00000067503 933 ntAPPRIS P1 BASIC10.15□□□□□ -0.78
Ube4bQ9ES00 Aldob-201ENSMUST00000029987 2016 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Ube4bQ9ES00 Il1rap-201ENSMUST00000023156 4520 ntAPPRIS P3 TSL 1 (best) BASIC10.15□□□□□ -0.78
Ube4bQ9ES00 Far1-211ENSMUST00000164745 3972 ntAPPRIS P1 TSL 5 BASIC10.15□□□□□ -0.78
Ube4bQ9ES00 Nsd3-201ENSMUST00000084026 9945 ntAPPRIS P2 TSL 2 BASIC10.15□□□□□ -0.78
Ube4bQ9ES00 Cyp4f16-208ENSMUST00000169591 2242 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Ube4bQ9ES00 Il1r1-201ENSMUST00000027241 5819 ntAPPRIS P3 TSL 1 (best) BASIC10.15□□□□□ -0.78
Ube4bQ9ES00 Rbbp5-201ENSMUST00000027700 3385 ntTSL 1 (best) BASIC10.15□□□□□ -0.79
Ube4bQ9ES00 Rap1gds1-201ENSMUST00000029796 3383 ntTSL 1 (best) BASIC10.15□□□□□ -0.79
Ube4bQ9ES00 Ftsj3-201ENSMUST00000021048 3144 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.79
Ube4bQ9ES00 Nfam1-202ENSMUST00000100377 2881 ntAPPRIS ALT2 TSL 1 (best) BASIC10.15□□□□□ -0.79
Ube4bQ9ES00 Eftud2-212ENSMUST00000173679 2889 ntTSL 5 BASIC10.15□□□□□ -0.79
Ube4bQ9ES00 Tmem108-201ENSMUST00000049452 3574 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.79
Ube4bQ9ES00 4932430I15Rik-201ENSMUST00000180431 3306 ntTSL 1 (best) BASIC10.15□□□□□ -0.79
Ube4bQ9ES00 Dlgap4-202ENSMUST00000070782 3303 ntAPPRIS ALT2 TSL 1 (best) BASIC10.15□□□□□ -0.79
Ube4bQ9ES00 Tomm40l-203ENSMUST00000111327 2812 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.79
Ube4bQ9ES00 Ccpg1-206ENSMUST00000140675 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC10.15□□□□□ -0.79
Ube4bQ9ES00 Cyp2g1-201ENSMUST00000040944 1896 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.79
Ube4bQ9ES00 Nit1-201ENSMUST00000111289 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC10.15□□□□□ -0.79
Ube4bQ9ES00 Grb2-204ENSMUST00000106499 2333 ntTSL 1 (best) BASIC10.15□□□□□ -0.79
Retrieved 100 of 76,532 protein–RNA pairs in 35 ms