Protein–RNA interactions for Protein: Q9DB34

Chmp2a, Charged multivesicular body protein 2a, mousemouse

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2aQ9DB34 Atg16l2-201ENSMUST00000120267 6459 ntAPPRIS P2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Chmp2aQ9DB34 Cryz-201ENSMUST00000029850 2507 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Chmp2aQ9DB34 Specc1-214ENSMUST00000202389 3363 ntAPPRIS ALT2 TSL 5 BASIC11.12□□□□□ -0.63
Chmp2aQ9DB34 Slc38a8-201ENSMUST00000036748 2623 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Chmp2aQ9DB34 Tex45-201ENSMUST00000047265 1613 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
Chmp2aQ9DB34 Epn2-203ENSMUST00000108712 4458 ntAPPRIS ALT2 TSL 5 BASIC11.12□□□□□ -0.63
Chmp2aQ9DB34 Myo18a-201ENSMUST00000000645 7307 ntAPPRIS ALT2 TSL 5 BASIC11.12□□□□□ -0.63
Chmp2aQ9DB34 Myo18a-203ENSMUST00000092887 7304 ntAPPRIS P3 TSL 1 (best) BASIC11.12□□□□□ -0.63
Chmp2aQ9DB34 Slc22a14-201ENSMUST00000093775 2213 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Chmp2aQ9DB34 Gm45449-201ENSMUST00000211485 1960 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Chmp2aQ9DB34 Mdm1-201ENSMUST00000020437 3074 ntAPPRIS P3 TSL 1 (best) BASIC11.12□□□□□ -0.63
Chmp2aQ9DB34 Rbms2-201ENSMUST00000092033 1481 ntAPPRIS P4 TSL 1 (best) BASIC11.12□□□□□ -0.63
Chmp2aQ9DB34 Gm43274-201ENSMUST00000202545 5000 ntBASIC11.12□□□□□ -0.63
Chmp2aQ9DB34 AC154314.2-201ENSMUST00000223677 3502 ntBASIC11.12□□□□□ -0.63
Chmp2aQ9DB34 Kif4-201ENSMUST00000048962 4983 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Chmp2aQ9DB34 Mx2-201ENSMUST00000024112 2417 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Chmp2aQ9DB34 Ccm2-202ENSMUST00000109721 1551 ntTSL 5 BASIC11.11□□□□□ -0.63
Chmp2aQ9DB34 Zfp830-201ENSMUST00000056677 1591 ntAPPRIS P1 BASIC11.11□□□□□ -0.63
Chmp2aQ9DB34 Setd1b-201ENSMUST00000056053 7362 ntAPPRIS P2 TSL 5 BASIC11.11□□□□□ -0.63
Chmp2aQ9DB34 Pigo-202ENSMUST00000098109 4239 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
Chmp2aQ9DB34 9430015G10Rik-202ENSMUST00000105576 1329 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Chmp2aQ9DB34 Gemin8-202ENSMUST00000087169 1928 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
Chmp2aQ9DB34 Gpcpd1-205ENSMUST00000110142 3703 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
Chmp2aQ9DB34 Rsrc2-202ENSMUST00000057795 2270 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
Chmp2aQ9DB34 Ecsit-204ENSMUST00000180180 1676 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Chmp2aQ9DB34 Gm6559-201ENSMUST00000204678 1694 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Chmp2aQ9DB34 Fhdc1-201ENSMUST00000091002 4162 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Chmp2aQ9DB34 Olfr5-202ENSMUST00000209866 2980 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
Chmp2aQ9DB34 Mfsd4b5-203ENSMUST00000164566 2372 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Chmp2aQ9DB34 Arhgap24-203ENSMUST00000094559 3346 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Chmp2aQ9DB34 Vwa5b1-201ENSMUST00000030533 7486 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Chmp2aQ9DB34 Rasgrp4-201ENSMUST00000032811 4621 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Chmp2aQ9DB34 St5-201ENSMUST00000077909 4612 ntAPPRIS P4 TSL 1 (best) BASIC11.11□□□□□ -0.63
Chmp2aQ9DB34 Rasgrp4-202ENSMUST00000094617 4617 ntTSL 5 BASIC11.11□□□□□ -0.63
Chmp2aQ9DB34 Spata16-202ENSMUST00000108305 1789 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Chmp2aQ9DB34 A930003O13Rik-202ENSMUST00000197486 3098 ntBASIC11.11□□□□□ -0.63
Chmp2aQ9DB34 Trmt44-201ENSMUST00000030980 3790 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Chmp2aQ9DB34 Clcn6-205ENSMUST00000137724 5198 ntAPPRIS ALT1 TSL 5 BASIC11.11□□□□□ -0.63
Chmp2aQ9DB34 Metap1-203ENSMUST00000197531 3708 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Chmp2aQ9DB34 Urb1-203ENSMUST00000140920 7344 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
Chmp2aQ9DB34 9230111E07Rik-201ENSMUST00000124850 811 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Chmp2aQ9DB34 Treml4-203ENSMUST00000136272 811 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Chmp2aQ9DB34 Rnf181-212ENSMUST00000154098 969 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Chmp2aQ9DB34 Treml4-206ENSMUST00000154335 838 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Chmp2aQ9DB34 Gm15524-201ENSMUST00000159874 463 ntTSL 3 BASIC11.11□□□□□ -0.63
Chmp2aQ9DB34 Gas5-224ENSMUST00000162558 502 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Chmp2aQ9DB34 Gm20822-201ENSMUST00000165756 687 ntAPPRIS P1 BASIC11.11□□□□□ -0.63
Chmp2aQ9DB34 Gm9372-201ENSMUST00000168454 430 ntBASIC11.11□□□□□ -0.63
Chmp2aQ9DB34 Gm20828-201ENSMUST00000170889 687 ntAPPRIS P1 BASIC11.11□□□□□ -0.63
Chmp2aQ9DB34 Gm13272-201ENSMUST00000179425 811 ntAPPRIS P1 BASIC11.11□□□□□ -0.63
Chmp2aQ9DB34 9330179D12Rik-201ENSMUST00000180569 1105 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Chmp2aQ9DB34 Gm29237-201ENSMUST00000186216 448 ntTSL 5 BASIC11.11□□□□□ -0.63
Chmp2aQ9DB34 Gm5700-201ENSMUST00000191483 989 ntBASIC11.11□□□□□ -0.63
Chmp2aQ9DB34 Gm33366-201ENSMUST00000195583 3827 ntBASIC11.11□□□□□ -0.63
Chmp2aQ9DB34 Isoc2b-205ENSMUST00000208816 820 ntAPPRIS P1 TSL 3 BASIC11.11□□□□□ -0.63
Chmp2aQ9DB34 Gm18466-201ENSMUST00000209147 499 ntBASIC11.11□□□□□ -0.63
Chmp2aQ9DB34 Gm4903-201ENSMUST00000210462 405 ntBASIC11.11□□□□□ -0.63
Chmp2aQ9DB34 AI463170-202ENSMUST00000218453 558 ntTSL 2 BASIC11.11□□□□□ -0.63
Chmp2aQ9DB34 Dydc2-201ENSMUST00000022316 818 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Chmp2aQ9DB34 Gsto1-201ENSMUST00000026050 1182 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Chmp2aQ9DB34 Hcst-201ENSMUST00000075062 442 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Chmp2aQ9DB34 Cpne9-201ENSMUST00000041203 2777 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
Chmp2aQ9DB34 Ampd2-203ENSMUST00000102638 3650 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
Chmp2aQ9DB34 Mthfd1l-203ENSMUST00000120585 3687 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Chmp2aQ9DB34 Gm37806-201ENSMUST00000194524 6387 ntBASIC11.11□□□□□ -0.63
Chmp2aQ9DB34 Dcun1d2-203ENSMUST00000110839 2937 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Chmp2aQ9DB34 Cap2-202ENSMUST00000119341 2454 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Chmp2aQ9DB34 Prkcd-205ENSMUST00000112207 2139 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Chmp2aQ9DB34 H2-T3-201ENSMUST00000025312 2114 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Chmp2aQ9DB34 Gm5420-201ENSMUST00000071008 2206 ntTSL 2 BASIC11.11□□□□□ -0.63
Chmp2aQ9DB34 Prdm10-204ENSMUST00000215499 6772 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
Chmp2aQ9DB34 Tmem131l-203ENSMUST00000192095 4774 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Chmp2aQ9DB34 Cfap43-202ENSMUST00000095998 3764 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Chmp2aQ9DB34 Gm5532-201ENSMUST00000097531 1751 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Chmp2aQ9DB34 A1cf-202ENSMUST00000224304 2968 ntAPPRIS ALT1 BASIC11.1□□□□□ -0.63
Chmp2aQ9DB34 Gm45532-201ENSMUST00000210342 3620 ntBASIC11.1□□□□□ -0.63
Chmp2aQ9DB34 Gm11986-201ENSMUST00000149481 1439 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Chmp2aQ9DB34 Epb41-202ENSMUST00000054917 4948 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
Chmp2aQ9DB34 Tns1-217ENSMUST00000191104 9904 ntAPPRIS P3 TSL 5 BASIC11.1□□□□□ -0.63
Chmp2aQ9DB34 Zfp14-201ENSMUST00000077787 1506 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Chmp2aQ9DB34 Ikbkb-201ENSMUST00000033939 3580 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Chmp2aQ9DB34 Gm4846-201ENSMUST00000143922 1744 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Chmp2aQ9DB34 Myc-206ENSMUST00000167731 1821 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Chmp2aQ9DB34 Nop2-201ENSMUST00000044200 2597 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Chmp2aQ9DB34 Mx1-202ENSMUST00000113768 2695 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Chmp2aQ9DB34 Igsf1-204ENSMUST00000114893 2671 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Chmp2aQ9DB34 Epx-201ENSMUST00000049768 2689 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Chmp2aQ9DB34 Oma1-201ENSMUST00000035780 1915 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Chmp2aQ9DB34 Sphk2-202ENSMUST00000107737 3548 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Chmp2aQ9DB34 Zfp384-204ENSMUST00000088308 2875 ntAPPRIS P2 TSL 5 BASIC11.1□□□□□ -0.63
Chmp2aQ9DB34 Gm14213-201ENSMUST00000119778 768 ntBASIC11.1□□□□□ -0.63
Chmp2aQ9DB34 Gm6425-201ENSMUST00000136332 790 ntBASIC11.1□□□□□ -0.63
Chmp2aQ9DB34 1700123M08Rik-202ENSMUST00000146154 770 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Chmp2aQ9DB34 Adora3-202ENSMUST00000164730 1219 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Chmp2aQ9DB34 Mocs2-205ENSMUST00000165022 962 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Chmp2aQ9DB34 Gm18014-201ENSMUST00000183369 817 ntBASIC11.1□□□□□ -0.63
Chmp2aQ9DB34 Gm43460-201ENSMUST00000202491 1057 ntBASIC11.1□□□□□ -0.63
Chmp2aQ9DB34 Gm8162-201ENSMUST00000213951 665 ntBASIC11.1□□□□□ -0.63
Chmp2aQ9DB34 CT010480.2-201ENSMUST00000225424 737 ntBASIC11.1□□□□□ -0.63
Chmp2aQ9DB34 Rpl3l-201ENSMUST00000045186 1033 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 41 ms