Protein–RNA interactions for Protein: Q9CYB0

Trim13, E3 ubiquitin-protein ligase TRIM13, mousemouse

Predictions only

Length 407 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim13Q9CYB0 Efcab12-201ENSMUST00000032468 2551 ntAPPRIS P1 TSL 5 BASIC9.86□□□□□ -0.83
Trim13Q9CYB0 Gfra2-203ENSMUST00000227697 1323 ntBASIC9.86□□□□□ -0.83
Trim13Q9CYB0 Zp3-201ENSMUST00000005073 1323 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Trim13Q9CYB0 Traip-201ENSMUST00000049348 2706 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Trim13Q9CYB0 Abcc4-202ENSMUST00000166646 5504 ntAPPRIS ALT2 TSL 1 (best) BASIC9.86□□□□□ -0.83
Trim13Q9CYB0 Stra6-213ENSMUST00000167479 2871 ntAPPRIS P1 TSL 5 BASIC9.86□□□□□ -0.83
Trim13Q9CYB0 Setmar-201ENSMUST00000049246 1612 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Trim13Q9CYB0 Rpl22-204ENSMUST00000139685 2051 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Trim13Q9CYB0 Elf5-206ENSMUST00000164172 2532 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Trim13Q9CYB0 Gm44888-201ENSMUST00000209119 2541 ntBASIC9.86□□□□□ -0.83
Trim13Q9CYB0 Gm44445-201ENSMUST00000204075 2683 ntBASIC9.86□□□□□ -0.83
Trim13Q9CYB0 9430064I24Rik-201ENSMUST00000206516 2669 ntBASIC9.86□□□□□ -0.83
Trim13Q9CYB0 Gbp3-201ENSMUST00000029935 2681 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Trim13Q9CYB0 Myh10-201ENSMUST00000018887 7667 ntTSL 5 BASIC9.86□□□□□ -0.83
Trim13Q9CYB0 Atxn2l-206ENSMUST00000206577 3894 ntAPPRIS ALT2 TSL 5 BASIC9.86□□□□□ -0.83
Trim13Q9CYB0 Dido1-206ENSMUST00000103057 4906 ntAPPRIS ALT2 TSL 1 (best) BASIC9.86□□□□□ -0.83
Trim13Q9CYB0 Uvssa-201ENSMUST00000087864 7326 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Trim13Q9CYB0 Gm5797-201ENSMUST00000100886 997 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Trim13Q9CYB0 Gm22920-201ENSMUST00000102175 109 ntBASIC9.86□□□□□ -0.83
Trim13Q9CYB0 Myl4-202ENSMUST00000106956 900 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Trim13Q9CYB0 Gm3149-201ENSMUST00000112779 997 ntAPPRIS ALT2 TSL 5 BASIC9.86□□□□□ -0.83
Trim13Q9CYB0 Gm7851-201ENSMUST00000117574 323 ntBASIC9.86□□□□□ -0.83
Trim13Q9CYB0 C230038L03Rik-202ENSMUST00000136294 1197 ntTSL 2 BASIC9.86□□□□□ -0.83
Trim13Q9CYB0 Nudt6-207ENSMUST00000141438 899 ntTSL 2 BASIC9.86□□□□□ -0.83
Trim13Q9CYB0 Gm3948-201ENSMUST00000147795 421 ntTSL 3 BASIC9.86□□□□□ -0.83
Trim13Q9CYB0 Gm8362-202ENSMUST00000170673 997 ntAPPRIS ALT2 TSL 5 BASIC9.86□□□□□ -0.83
Trim13Q9CYB0 Gm25732-201ENSMUST00000175168 60 ntBASIC9.86□□□□□ -0.83
Trim13Q9CYB0 Mir7070-201ENSMUST00000183657 86 ntBASIC9.86□□□□□ -0.83
Trim13Q9CYB0 Mir7051-201ENSMUST00000184167 73 ntBASIC9.86□□□□□ -0.83
Trim13Q9CYB0 Gm27184-201ENSMUST00000185095 607 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
Trim13Q9CYB0 Myl4-201ENSMUST00000018800 879 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Trim13Q9CYB0 Platr10-202ENSMUST00000191479 818 ntBASIC9.86□□□□□ -0.83
Trim13Q9CYB0 Gm42450-201ENSMUST00000199286 2644 ntTSL 5 BASIC9.86□□□□□ -0.83
Trim13Q9CYB0 Gm10046-201ENSMUST00000208208 632 ntTSL 2 BASIC9.86□□□□□ -0.83
Trim13Q9CYB0 Gm45909-201ENSMUST00000212413 1031 ntBASIC9.86□□□□□ -0.83
Trim13Q9CYB0 Abracl-204ENSMUST00000220110 768 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Trim13Q9CYB0 Abhd11os-203ENSMUST00000222613 363 ntBASIC9.86□□□□□ -0.83
Trim13Q9CYB0 CT009713.8-201ENSMUST00000225448 560 ntBASIC9.86□□□□□ -0.83
Trim13Q9CYB0 Tctex1d1-201ENSMUST00000030248 977 ntAPPRIS P3 TSL 1 (best) BASIC9.86□□□□□ -0.83
Trim13Q9CYB0 Nlrx1-201ENSMUST00000034621 3669 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Trim13Q9CYB0 Zc3h12a-201ENSMUST00000036188 2755 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Trim13Q9CYB0 5930422O12Rik-201ENSMUST00000059351 840 ntAPPRIS P1 BASIC9.86□□□□□ -0.83
Trim13Q9CYB0 Hist1h1b-201ENSMUST00000080511 743 ntAPPRIS P1 BASIC9.86□□□□□ -0.83
Trim13Q9CYB0 Gm10020-201ENSMUST00000081993 612 ntBASIC9.86□□□□□ -0.83
Trim13Q9CYB0 4930572O03Rik-201ENSMUST00000092696 1169 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Trim13Q9CYB0 Aplp2-201ENSMUST00000072634 3634 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Trim13Q9CYB0 Tbc1d31-201ENSMUST00000022992 3311 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Trim13Q9CYB0 Slc19a1-208ENSMUST00000136925 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC9.86□□□□□ -0.83
Trim13Q9CYB0 Olfr71-203ENSMUST00000217544 2707 ntAPPRIS P1 TSL 5 BASIC9.86□□□□□ -0.83
Trim13Q9CYB0 Zfp940-202ENSMUST00000108223 2560 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
Trim13Q9CYB0 Polh-201ENSMUST00000024749 2569 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Trim13Q9CYB0 Itgam-203ENSMUST00000106242 4649 ntAPPRIS P3 TSL 1 (best) BASIC9.86□□□□□ -0.83
Trim13Q9CYB0 Tpp2-207ENSMUST00000188313 4631 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Trim13Q9CYB0 Qrfpr-201ENSMUST00000091227 1839 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Trim13Q9CYB0 Lrit3-201ENSMUST00000179187 1683 ntAPPRIS ALT2 TSL 5 BASIC9.86□□□□□ -0.83
Trim13Q9CYB0 Lpxn-201ENSMUST00000025601 1675 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Trim13Q9CYB0 Srsf5-201ENSMUST00000094693 1527 ntAPPRIS P3 TSL 1 (best) BASIC9.86□□□□□ -0.83
Trim13Q9CYB0 Gm21969-201ENSMUST00000178644 4402 ntAPPRIS P1 TSL 5 BASIC9.86□□□□□ -0.83
Trim13Q9CYB0 4732487G21Rik-201ENSMUST00000181495 2664 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
Trim13Q9CYB0 Specc1-208ENSMUST00000201624 2518 ntTSL 5 BASIC9.86□□□□□ -0.83
Trim13Q9CYB0 Gm15482-201ENSMUST00000152691 4529 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
Trim13Q9CYB0 Aph1b-201ENSMUST00000034934 4910 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Trim13Q9CYB0 Arid1a-201ENSMUST00000008024 6486 ntAPPRIS ALT2 TSL 1 (best) BASIC9.86□□□□□ -0.83
Trim13Q9CYB0 Ap3m1-206ENSMUST00000154460 6732 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Trim13Q9CYB0 Wac-216ENSMUST00000171486 1608 ntTSL 5 BASIC9.85□□□□□ -0.83
Trim13Q9CYB0 Gprin2-203ENSMUST00000226613 10354 ntAPPRIS P1 BASIC9.85□□□□□ -0.83
Trim13Q9CYB0 CK137956-201ENSMUST00000030614 2319 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Trim13Q9CYB0 Npy1r-201ENSMUST00000039303 3001 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Trim13Q9CYB0 Mcm3-201ENSMUST00000053266 3031 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Trim13Q9CYB0 Babam2-204ENSMUST00000114515 1497 ntTSL 5 BASIC9.85□□□□□ -0.83
Trim13Q9CYB0 Gm364-201ENSMUST00000114725 2156 ntAPPRIS P1 TSL 2 BASIC9.85□□□□□ -0.83
Trim13Q9CYB0 BC052040-201ENSMUST00000110918 2735 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Trim13Q9CYB0 5730403I07Rik-201ENSMUST00000183878 2033 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
Trim13Q9CYB0 Dmrtc1b-203ENSMUST00000118842 1321 ntAPPRIS ALT2 TSL 1 (best) BASIC9.85□□□□□ -0.83
Trim13Q9CYB0 Phf21a-204ENSMUST00000111290 6332 ntTSL 5 BASIC9.85□□□□□ -0.83
Trim13Q9CYB0 Phf21a-203ENSMUST00000090586 6310 ntAPPRIS ALT2 TSL 1 (best) BASIC9.85□□□□□ -0.83
Trim13Q9CYB0 Adamts4-202ENSMUST00000111315 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC9.85□□□□□ -0.83
Trim13Q9CYB0 Gm29773-201ENSMUST00000212751 1895 ntTSL 2 BASIC9.85□□□□□ -0.83
Trim13Q9CYB0 Phf8-202ENSMUST00000046962 3105 ntAPPRIS P3 TSL 1 (best) BASIC9.85□□□□□ -0.83
Trim13Q9CYB0 Gm26751-201ENSMUST00000181218 4245 ntTSL 5 BASIC9.85□□□□□ -0.83
Trim13Q9CYB0 Trem1-201ENSMUST00000048782 2993 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Trim13Q9CYB0 Slc10a1-202ENSMUST00000218162 1749 ntAPPRIS P2 TSL 1 (best) BASIC9.85□□□□□ -0.83
Trim13Q9CYB0 Tmem126b-201ENSMUST00000032843 2259 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Trim13Q9CYB0 Gm18198-201ENSMUST00000204986 1551 ntBASIC9.85□□□□□ -0.83
Trim13Q9CYB0 Eif2s3y-201ENSMUST00000091197 1836 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Trim13Q9CYB0 Nudcd1-201ENSMUST00000038719 2600 ntAPPRIS ALT2 TSL 1 (best) BASIC9.85□□□□□ -0.83
Trim13Q9CYB0 Irf4-202ENSMUST00000110307 4761 ntAPPRIS ALT1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Trim13Q9CYB0 Irf4-201ENSMUST00000021784 4764 ntAPPRIS P3 TSL 1 (best) BASIC9.85□□□□□ -0.83
Trim13Q9CYB0 Gm5795-201ENSMUST00000100920 984 ntAPPRIS P2 TSL 5 BASIC9.85□□□□□ -0.83
Trim13Q9CYB0 Tm2d3-203ENSMUST00000107495 1003 ntAPPRIS P4 TSL 5 BASIC9.85□□□□□ -0.83
Trim13Q9CYB0 Dynlrb1-202ENSMUST00000109682 684 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Trim13Q9CYB0 Gm13035-201ENSMUST00000117496 342 ntBASIC9.85□□□□□ -0.83
Trim13Q9CYB0 Zfp36l1-ps-201ENSMUST00000118349 899 ntBASIC9.85□□□□□ -0.83
Trim13Q9CYB0 2900011O08Rik-202ENSMUST00000118412 954 ntTSL 3 BASIC9.85□□□□□ -0.83
Trim13Q9CYB0 Gm4917-201ENSMUST00000121452 650 ntBASIC9.85□□□□□ -0.83
Trim13Q9CYB0 Rtbdn-203ENSMUST00000121880 1223 ntAPPRIS P2 TSL 1 (best) BASIC9.85□□□□□ -0.83
Trim13Q9CYB0 Gm14396-201ENSMUST00000126966 548 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
Trim13Q9CYB0 Zfp629-204ENSMUST00000128731 823 ntTSL 3 BASIC9.85□□□□□ -0.83
Trim13Q9CYB0 Nr5a1os-201ENSMUST00000146954 926 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
Trim13Q9CYB0 Tnni2-206ENSMUST00000149529 768 ntAPPRIS P1 TSL 2 BASIC9.85□□□□□ -0.83
Retrieved 100 of 76,532 protein–RNA pairs in 55.2 ms