Protein–RNA interactions for Protein: Q8CEG5

Ccdc28b, Coiled-coil domain-containing protein 28B, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28bQ8CEG5 Dido1-204ENSMUST00000103055 4613 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Ccdc28bQ8CEG5 Fer1l5-202ENSMUST00000179162 6315 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Ccdc28bQ8CEG5 Car12-201ENSMUST00000071889 3716 ntAPPRIS P3 TSL 1 (best) BASIC10.51□□□□□ -0.73
Ccdc28bQ8CEG5 Dcx-204ENSMUST00000112856 1333 ntAPPRIS P3 TSL 1 (best) BASIC10.51□□□□□ -0.73
Ccdc28bQ8CEG5 Gm9415-201ENSMUST00000200462 1321 ntBASIC10.51□□□□□ -0.73
Ccdc28bQ8CEG5 Lin54-209ENSMUST00000152387 2760 ntTSL 5 BASIC10.51□□□□□ -0.73
Ccdc28bQ8CEG5 Ctsl-205ENSMUST00000222517 6168 ntAPPRIS P1 TSL 5 BASIC10.51□□□□□ -0.73
Ccdc28bQ8CEG5 Gm37671-201ENSMUST00000193198 2096 ntBASIC10.51□□□□□ -0.73
Ccdc28bQ8CEG5 Gm45139-201ENSMUST00000206543 2057 ntBASIC10.51□□□□□ -0.73
Ccdc28bQ8CEG5 D130017N08Rik-202ENSMUST00000180951 2573 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Ccdc28bQ8CEG5 BC025920-202ENSMUST00000119492 1895 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Ccdc28bQ8CEG5 9530026P05Rik-201ENSMUST00000181121 2142 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Ccdc28bQ8CEG5 Gm45397-201ENSMUST00000209816 1600 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Ccdc28bQ8CEG5 Acox2-204ENSMUST00000164598 2907 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Ccdc28bQ8CEG5 Scn5a-203ENSMUST00000120420 7536 ntAPPRIS ALT1 TSL 5 BASIC10.51□□□□□ -0.73
Ccdc28bQ8CEG5 Abi2-205ENSMUST00000187709 1671 ntAPPRIS P1 TSL 5 BASIC10.5□□□□□ -0.73
Ccdc28bQ8CEG5 BC052040-201ENSMUST00000110918 2735 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Ccdc28bQ8CEG5 Bcl2l11-201ENSMUST00000019281 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC10.5□□□□□ -0.73
Ccdc28bQ8CEG5 Rab36-207ENSMUST00000147802 3291 ntAPPRIS P1 TSL 5 BASIC10.5□□□□□ -0.73
Ccdc28bQ8CEG5 Gm38199-201ENSMUST00000192013 3277 ntBASIC10.5□□□□□ -0.73
Ccdc28bQ8CEG5 Dctn1-204ENSMUST00000113918 4321 ntTSL 5 BASIC10.5□□□□□ -0.73
Ccdc28bQ8CEG5 Rint1-203ENSMUST00000115113 3048 ntAPPRIS ALT2 TSL 1 (best) BASIC10.5□□□□□ -0.73
Ccdc28bQ8CEG5 4932702P03Rik-202ENSMUST00000151220 2792 ntTSL 2 BASIC10.5□□□□□ -0.73
Ccdc28bQ8CEG5 Ppm1f-201ENSMUST00000027373 4922 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Ccdc28bQ8CEG5 Slc35f6-201ENSMUST00000062962 3088 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Ccdc28bQ8CEG5 Gm35725-201ENSMUST00000221862 2800 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Ccdc28bQ8CEG5 Pax6-207ENSMUST00000111087 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Ccdc28bQ8CEG5 Thap2-201ENSMUST00000020346 3681 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Ccdc28bQ8CEG5 Gm44570-201ENSMUST00000207526 3698 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Ccdc28bQ8CEG5 AC166836.1-201ENSMUST00000219933 1795 ntBASIC10.5□□□□□ -0.73
Ccdc28bQ8CEG5 Elavl1-204ENSMUST00000209010 2317 ntAPPRIS P1 TSL 5 BASIC10.5□□□□□ -0.73
Ccdc28bQ8CEG5 Bet1-201ENSMUST00000049166 1516 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Ccdc28bQ8CEG5 Tmco3-201ENSMUST00000045229 4335 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Ccdc28bQ8CEG5 Alox8-201ENSMUST00000021262 3226 ntAPPRIS P2 TSL 1 (best) BASIC10.5□□□□□ -0.73
Ccdc28bQ8CEG5 Tmprss13-201ENSMUST00000034597 3245 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Ccdc28bQ8CEG5 Xab2-201ENSMUST00000019614 2677 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Ccdc28bQ8CEG5 Urad-201ENSMUST00000100433 766 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Ccdc28bQ8CEG5 Aurkaip1-202ENSMUST00000105591 773 ntAPPRIS P1 TSL 3 BASIC10.5□□□□□ -0.73
Ccdc28bQ8CEG5 Fgf8-204ENSMUST00000111925 702 ntTSL 5 BASIC10.5□□□□□ -0.73
Ccdc28bQ8CEG5 Gm14058-201ENSMUST00000116082 735 ntBASIC10.5□□□□□ -0.73
Ccdc28bQ8CEG5 Gm11411-201ENSMUST00000117951 719 ntBASIC10.5□□□□□ -0.73
Ccdc28bQ8CEG5 Gm11956-201ENSMUST00000119525 512 ntBASIC10.5□□□□□ -0.73
Ccdc28bQ8CEG5 Gm13350-201ENSMUST00000120519 479 ntBASIC10.5□□□□□ -0.73
Ccdc28bQ8CEG5 4921508D12Rik-201ENSMUST00000124095 1075 ntTSL 2 BASIC10.5□□□□□ -0.73
Ccdc28bQ8CEG5 Gm15486-201ENSMUST00000135147 604 ntTSL 3 BASIC10.5□□□□□ -0.73
Ccdc28bQ8CEG5 U2af1l4-234ENSMUST00000171850 564 ntTSL 5 BASIC10.5□□□□□ -0.73
Ccdc28bQ8CEG5 Mymx-203ENSMUST00000178858 804 ntAPPRIS ALT2 TSL 1 (best) BASIC10.5□□□□□ -0.73
Ccdc28bQ8CEG5 Gm40414-201ENSMUST00000197608 481 ntBASIC10.5□□□□□ -0.73
Ccdc28bQ8CEG5 Gm30946-201ENSMUST00000198288 724 ntBASIC10.5□□□□□ -0.73
Ccdc28bQ8CEG5 AC154319.1-201ENSMUST00000216330 312 ntBASIC10.5□□□□□ -0.73
Ccdc28bQ8CEG5 Abracl-204ENSMUST00000220110 768 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Ccdc28bQ8CEG5 4933416O17Rik-201ENSMUST00000220972 2122 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Ccdc28bQ8CEG5 AC166344.1-201ENSMUST00000223745 674 ntBASIC10.5□□□□□ -0.73
Ccdc28bQ8CEG5 AL589735.1-201ENSMUST00000224353 270 ntBASIC10.5□□□□□ -0.73
Ccdc28bQ8CEG5 Wfdc21-201ENSMUST00000070832 434 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Ccdc28bQ8CEG5 Rpl10a-ps2-201ENSMUST00000071184 642 ntBASIC10.5□□□□□ -0.73
Ccdc28bQ8CEG5 Inpp5b-201ENSMUST00000094782 3809 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Ccdc28bQ8CEG5 Cd2bp2-202ENSMUST00000166791 3284 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Ccdc28bQ8CEG5 Brca2-201ENSMUST00000044620 10724 ntAPPRIS P1 TSL 5 BASIC10.5□□□□□ -0.73
Ccdc28bQ8CEG5 Cyp2g1-201ENSMUST00000040944 1896 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Ccdc28bQ8CEG5 Gp1ba-202ENSMUST00000108551 2480 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Ccdc28bQ8CEG5 Uroc1-201ENSMUST00000046128 3370 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Ccdc28bQ8CEG5 Hspa2-201ENSMUST00000080449 2524 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Ccdc28bQ8CEG5 Sept6-201ENSMUST00000053456 4673 ntAPPRIS ALT1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Ccdc28bQ8CEG5 Tex9-214ENSMUST00000184831 1652 ntAPPRIS ALT2 TSL 5 BASIC10.5□□□□□ -0.73
Ccdc28bQ8CEG5 Vangl1-208ENSMUST00000168312 1740 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Ccdc28bQ8CEG5 Gm13104-201ENSMUST00000119651 1446 ntBASIC10.5□□□□□ -0.73
Ccdc28bQ8CEG5 Usp2-208ENSMUST00000177054 2370 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Ccdc28bQ8CEG5 Zadh2-201ENSMUST00000060223 3321 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Ccdc28bQ8CEG5 Smco1-201ENSMUST00000093183 1408 ntAPPRIS P1 TSL 5 BASIC10.5□□□□□ -0.73
Ccdc28bQ8CEG5 Sgk2-202ENSMUST00000117123 3034 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Ccdc28bQ8CEG5 Rbfox2-203ENSMUST00000166610 6573 ntAPPRIS P2 TSL 1 (best) BASIC10.49□□□□□ -0.73
Ccdc28bQ8CEG5 Ighg3-202ENSMUST00000223179 2414 ntAPPRIS P5 BASIC10.49□□□□□ -0.73
Ccdc28bQ8CEG5 Trim9-205ENSMUST00000221041 3767 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Ccdc28bQ8CEG5 Slfn3-201ENSMUST00000019130 1816 ntAPPRIS P2 TSL 1 (best) BASIC10.49□□□□□ -0.73
Ccdc28bQ8CEG5 Gm37909-201ENSMUST00000193157 2159 ntBASIC10.49□□□□□ -0.73
Ccdc28bQ8CEG5 Foxp2-205ENSMUST00000115474 2544 ntTSL 5 BASIC10.49□□□□□ -0.73
Ccdc28bQ8CEG5 Eif4e2-201ENSMUST00000050876 2869 ntTSL 5 BASIC10.49□□□□□ -0.73
Ccdc28bQ8CEG5 Myh11-201ENSMUST00000090287 6632 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Ccdc28bQ8CEG5 4930578C19Rik-201ENSMUST00000044188 1896 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Ccdc28bQ8CEG5 Gpm6b-205ENSMUST00000112227 3294 ntAPPRIS ALT1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Ccdc28bQ8CEG5 Prdm16-205ENSMUST00000105637 8595 ntAPPRIS ALT2 TSL 1 (best) BASIC10.49□□□□□ -0.73
Ccdc28bQ8CEG5 4933407K13Rik-203ENSMUST00000138943 4364 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Ccdc28bQ8CEG5 Prdm16-201ENSMUST00000030902 8598 ntAPPRIS P3 TSL 1 (best) BASIC10.49□□□□□ -0.73
Ccdc28bQ8CEG5 Baat-201ENSMUST00000043056 1941 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Ccdc28bQ8CEG5 Padi3-201ENSMUST00000026377 3072 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Ccdc28bQ8CEG5 n-R5s64-201ENSMUST00000102019 119 ntBASIC10.49□□□□□ -0.73
Ccdc28bQ8CEG5 Ctrc-202ENSMUST00000105781 784 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Ccdc28bQ8CEG5 Armc2-208ENSMUST00000162405 1135 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Ccdc28bQ8CEG5 Gm17231-203ENSMUST00000170133 637 ntTSL 3 BASIC10.49□□□□□ -0.73
Ccdc28bQ8CEG5 Gm37695-201ENSMUST00000191765 530 ntTSL 5 BASIC10.49□□□□□ -0.73
Ccdc28bQ8CEG5 Gm37835-201ENSMUST00000193305 361 ntBASIC10.49□□□□□ -0.73
Ccdc28bQ8CEG5 5730585A16Rik-201ENSMUST00000193457 1027 ntBASIC10.49□□□□□ -0.73
Ccdc28bQ8CEG5 Gm33222-201ENSMUST00000193725 654 ntTSL 3 BASIC10.49□□□□□ -0.73
Ccdc28bQ8CEG5 AU022133-201ENSMUST00000200601 873 ntBASIC10.49□□□□□ -0.73
Ccdc28bQ8CEG5 Gm35549-202ENSMUST00000203656 1009 ntAPPRIS P1 TSL 5 BASIC10.49□□□□□ -0.73
Ccdc28bQ8CEG5 CT030161.3-201ENSMUST00000218235 367 ntTSL 3 BASIC10.49□□□□□ -0.73
Ccdc28bQ8CEG5 AC159103.1-201ENSMUST00000228325 429 ntBASIC10.49□□□□□ -0.73
Ccdc28bQ8CEG5 Olfr887-201ENSMUST00000074681 930 ntAPPRIS P1 BASIC10.49□□□□□ -0.73
Ccdc28bQ8CEG5 Gm7551-201ENSMUST00000089593 1074 ntBASIC10.49□□□□□ -0.73
Retrieved 100 of 76,532 protein–RNA pairs in 53.5 ms