Protein–RNA interactions for Protein: Q3TL54

Trim43a, Tripartite motif-containing protein 43A, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43aQ3TL54 Rpgr-202ENSMUST00000072393 2380 ntAPPRIS ALT2 TSL 2 BASIC11.27□□□□□ -0.6
Trim43aQ3TL54 Nrap-202ENSMUST00000073536 5501 ntAPPRIS P4 TSL 1 (best) BASIC11.27□□□□□ -0.6
Trim43aQ3TL54 Plscr2-205ENSMUST00000180154 1900 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Trim43aQ3TL54 Slitrk1-201ENSMUST00000100322 5359 ntAPPRIS P1 BASIC11.27□□□□□ -0.6
Trim43aQ3TL54 Slco5a1-205ENSMUST00000146763 3437 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
Trim43aQ3TL54 Gm6268-201ENSMUST00000115253 1453 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.6
Trim43aQ3TL54 Il1f5-206ENSMUST00000168941 1722 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.61
Trim43aQ3TL54 Pex2-201ENSMUST00000059021 1749 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Trim43aQ3TL54 Gm42587-201ENSMUST00000198462 1981 ntBASIC11.27□□□□□ -0.61
Trim43aQ3TL54 Gm40557-201ENSMUST00000220782 2736 ntTSL 5 BASIC11.27□□□□□ -0.61
Trim43aQ3TL54 Adamts9-201ENSMUST00000113438 8016 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.61
Trim43aQ3TL54 Slit2-202ENSMUST00000170109 7758 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.61
Trim43aQ3TL54 Slit2-217ENSMUST00000174421 7785 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Trim43aQ3TL54 Bcl9l-203ENSMUST00000218183 6771 ntAPPRIS P2 TSL 5 BASIC11.27□□□□□ -0.61
Trim43aQ3TL54 Gm38199-201ENSMUST00000192013 3277 ntBASIC11.27□□□□□ -0.61
Trim43aQ3TL54 Gm38116-201ENSMUST00000193873 1533 ntBASIC11.27□□□□□ -0.61
Trim43aQ3TL54 4930566F21Rik-201ENSMUST00000201177 1535 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Trim43aQ3TL54 Cryzl1-204ENSMUST00000122254 845 ntTSL 3 BASIC11.27□□□□□ -0.61
Trim43aQ3TL54 Mir1893-201ENSMUST00000122565 83 ntBASIC11.27□□□□□ -0.61
Trim43aQ3TL54 Gng2-203ENSMUST00000159073 960 ntAPPRIS P1 TSL 2 BASIC11.27□□□□□ -0.61
Trim43aQ3TL54 Gm17709-201ENSMUST00000174536 1096 ntBASIC11.27□□□□□ -0.61
Trim43aQ3TL54 Gm3551-201ENSMUST00000190750 664 ntBASIC11.27□□□□□ -0.61
Trim43aQ3TL54 Gm37826-201ENSMUST00000195329 322 ntBASIC11.27□□□□□ -0.61
Trim43aQ3TL54 Gm9645-201ENSMUST00000197131 792 ntBASIC11.27□□□□□ -0.61
Trim43aQ3TL54 Gm9463-201ENSMUST00000206707 601 ntBASIC11.27□□□□□ -0.61
Trim43aQ3TL54 Gm18466-201ENSMUST00000209147 499 ntBASIC11.27□□□□□ -0.61
Trim43aQ3TL54 4930448E22Rik-203ENSMUST00000215349 299 ntTSL 3 BASIC11.27□□□□□ -0.61
Trim43aQ3TL54 CT025618.1-203ENSMUST00000227008 589 ntBASIC11.27□□□□□ -0.61
Trim43aQ3TL54 CT030637.1-201ENSMUST00000228016 669 ntBASIC11.27□□□□□ -0.61
Trim43aQ3TL54 Odf3-201ENSMUST00000026555 1128 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Trim43aQ3TL54 Olfr414-201ENSMUST00000053178 955 ntAPPRIS P1 BASIC11.27□□□□□ -0.61
Trim43aQ3TL54 Gm6430-201ENSMUST00000054664 1248 ntBASIC11.27□□□□□ -0.61
Trim43aQ3TL54 Ctxn2-201ENSMUST00000099452 1028 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Trim43aQ3TL54 Adcy8-202ENSMUST00000228014 6900 ntAPPRIS ALT2 BASIC11.27□□□□□ -0.61
Trim43aQ3TL54 Aasdhppt-201ENSMUST00000051589 2843 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Trim43aQ3TL54 Aqr-202ENSMUST00000102543 4352 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Trim43aQ3TL54 Gm7598-201ENSMUST00000130251 3123 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Trim43aQ3TL54 Slfn3-201ENSMUST00000019130 1816 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Trim43aQ3TL54 Gsdma3-202ENSMUST00000107508 1587 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.61
Trim43aQ3TL54 Platr7-201ENSMUST00000181466 1334 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Trim43aQ3TL54 Slc7a1-201ENSMUST00000048116 7179 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Trim43aQ3TL54 Zbtb21-202ENSMUST00000063605 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Trim43aQ3TL54 Dusp11-201ENSMUST00000032071 6435 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Trim43aQ3TL54 C4b-201ENSMUST00000069507 5379 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Trim43aQ3TL54 Madd-204ENSMUST00000077941 5990 ntAPPRIS ALT2 TSL 2 BASIC11.27□□□□□ -0.61
Trim43aQ3TL54 Madd-205ENSMUST00000099723 5977 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Trim43aQ3TL54 Calr4-204ENSMUST00000106631 2155 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Trim43aQ3TL54 Tmem63a-205ENSMUST00000161523 3258 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Trim43aQ3TL54 Mon2-201ENSMUST00000037557 5511 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.61
Trim43aQ3TL54 Gm10857-201ENSMUST00000195343 2794 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Trim43aQ3TL54 Fgd4-204ENSMUST00000161188 2214 ntTSL 2 BASIC11.27□□□□□ -0.61
Trim43aQ3TL54 Kif2b-201ENSMUST00000061019 2244 ntAPPRIS P1 BASIC11.27□□□□□ -0.61
Trim43aQ3TL54 Sept4-203ENSMUST00000107960 1653 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Trim43aQ3TL54 Adra1a-202ENSMUST00000159068 4282 ntAPPRIS P1 TSL 2 BASIC11.26□□□□□ -0.61
Trim43aQ3TL54 Fn1-203ENSMUST00000186129 7797 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trim43aQ3TL54 Pip5k1a-201ENSMUST00000005768 3480 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
Trim43aQ3TL54 Slc25a44-204ENSMUST00000195657 3504 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trim43aQ3TL54 Prkd3-204ENSMUST00000119284 4743 ntAPPRIS ALT1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trim43aQ3TL54 4930478P22Rik-203ENSMUST00000202026 2060 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Trim43aQ3TL54 Il12rb2-201ENSMUST00000018485 2998 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trim43aQ3TL54 Loxl3-202ENSMUST00000101257 3252 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Trim43aQ3TL54 Zbtb8b-201ENSMUST00000053042 3288 ntAPPRIS P2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trim43aQ3TL54 Dhtkd1-201ENSMUST00000026924 3852 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trim43aQ3TL54 Gm44926-201ENSMUST00000207898 1826 ntBASIC11.26□□□□□ -0.61
Trim43aQ3TL54 Adam12-201ENSMUST00000067680 7675 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trim43aQ3TL54 AC153370.2-201ENSMUST00000217920 3093 ntTSL 5 BASIC11.26□□□□□ -0.61
Trim43aQ3TL54 Supt20-ps-201ENSMUST00000117999 1560 ntBASIC11.26□□□□□ -0.61
Trim43aQ3TL54 Lyplal1-201ENSMUST00000045388 1578 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trim43aQ3TL54 Syk-202ENSMUST00000118756 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trim43aQ3TL54 Cdyl-201ENSMUST00000075220 3470 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Trim43aQ3TL54 Ttc4-202ENSMUST00000106772 935 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
Trim43aQ3TL54 Gm12663-201ENSMUST00000118481 958 ntBASIC11.26□□□□□ -0.61
Trim43aQ3TL54 Gm15285-201ENSMUST00000119271 473 ntBASIC11.26□□□□□ -0.61
Trim43aQ3TL54 Gm11824-201ENSMUST00000120191 846 ntBASIC11.26□□□□□ -0.61
Trim43aQ3TL54 Gm14965-201ENSMUST00000124118 565 ntTSL 2 BASIC11.26□□□□□ -0.61
Trim43aQ3TL54 Gm16165-201ENSMUST00000160140 795 ntBASIC11.26□□□□□ -0.61
Trim43aQ3TL54 Nlrp5-ps-202ENSMUST00000173220 1294 ntBASIC11.26□□□□□ -0.61
Trim43aQ3TL54 Gm20441-201ENSMUST00000173512 756 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
Trim43aQ3TL54 Gm9358-201ENSMUST00000183067 927 ntBASIC11.26□□□□□ -0.61
Trim43aQ3TL54 1700088E04Rik-203ENSMUST00000186053 535 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Trim43aQ3TL54 Gm7271-202ENSMUST00000191515 836 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
Trim43aQ3TL54 Gm42780-201ENSMUST00000197083 734 ntBASIC11.26□□□□□ -0.61
Trim43aQ3TL54 Gm43634-201ENSMUST00000202671 675 ntTSL 3 BASIC11.26□□□□□ -0.61
Trim43aQ3TL54 Gm45717-201ENSMUST00000211129 495 ntAPPRIS P1 TSL 3 BASIC11.26□□□□□ -0.61
Trim43aQ3TL54 Apoa5-205ENSMUST00000215187 495 ntTSL 5 BASIC11.26□□□□□ -0.61
Trim43aQ3TL54 Gm19046-201ENSMUST00000221263 1298 ntBASIC11.26□□□□□ -0.61
Trim43aQ3TL54 AC159196.1-201ENSMUST00000225524 377 ntBASIC11.26□□□□□ -0.61
Trim43aQ3TL54 Nceh1-202ENSMUST00000091284 830 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Trim43aQ3TL54 Lst1-201ENSMUST00000097336 415 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trim43aQ3TL54 Git2-203ENSMUST00000112183 4886 ntTSL 5 BASIC11.26□□□□□ -0.61
Trim43aQ3TL54 Mak-202ENSMUST00000070193 2937 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Trim43aQ3TL54 Phf24-203ENSMUST00000107976 6538 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Trim43aQ3TL54 Gpm6b-205ENSMUST00000112227 3294 ntAPPRIS ALT1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trim43aQ3TL54 Gm19165-201ENSMUST00000204453 1982 ntBASIC11.26□□□□□ -0.61
Trim43aQ3TL54 Stra6-201ENSMUST00000034880 2993 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trim43aQ3TL54 Gm21998-201ENSMUST00000117552 1308 ntBASIC11.26□□□□□ -0.61
Trim43aQ3TL54 Hspd1-ps4-201ENSMUST00000121815 1668 ntBASIC11.26□□□□□ -0.61
Trim43aQ3TL54 AC156631.1-201ENSMUST00000215213 1358 ntTSL 5 BASIC11.26□□□□□ -0.61
Trim43aQ3TL54 Ceacam1-205ENSMUST00000206171 1722 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trim43aQ3TL54 Vmn1r38-202ENSMUST00000227493 3486 ntAPPRIS P1 BASIC11.26□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 47.3 ms