Protein–RNA interactions for Protein: P97496

Smarcc1, SWI/SNF complex subunit SMARCC1, mousemouse

Predictions only

Length 1,104 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcc1P97496 Gm16480-201ENSMUST00000120439 832 ntBASIC13.37□□□□□ -0.27
Smarcc1P97496 Gm9097-201ENSMUST00000120514 880 ntBASIC13.37□□□□□ -0.27
Smarcc1P97496 Gm16263-201ENSMUST00000144680 502 ntTSL 3 BASIC13.37□□□□□ -0.27
Smarcc1P97496 Gm14341-201ENSMUST00000154616 667 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Smarcc1P97496 Rian-208ENSMUST00000182370 352 ntTSL 3 BASIC13.37□□□□□ -0.27
Smarcc1P97496 Mpzl1-203ENSMUST00000191818 853 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Smarcc1P97496 Gm31466-201ENSMUST00000195457 916 ntTSL 3 BASIC13.37□□□□□ -0.27
Smarcc1P97496 Gm3945-201ENSMUST00000196637 683 ntBASIC13.37□□□□□ -0.27
Smarcc1P97496 Gm43821-201ENSMUST00000199198 729 ntTSL 3 BASIC13.37□□□□□ -0.27
Smarcc1P97496 AC166902.2-202ENSMUST00000213191 1038 ntTSL 5 BASIC13.37□□□□□ -0.27
Smarcc1P97496 Gm9790-201ENSMUST00000054148 288 ntBASIC13.37□□□□□ -0.27
Smarcc1P97496 Gm46430-201ENSMUST00000220478 1989 ntTSL 3 BASIC13.37□□□□□ -0.27
Smarcc1P97496 Cad-204ENSMUST00000201182 6529 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Smarcc1P97496 Rnf123-218ENSMUST00000178267 4309 ntAPPRIS P3 TSL 5 BASIC13.37□□□□□ -0.27
Smarcc1P97496 Cd2bp2-207ENSMUST00000206026 2906 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Smarcc1P97496 Dnajb6-201ENSMUST00000008733 2918 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Smarcc1P97496 Cttnbp2nl-201ENSMUST00000077548 4946 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Smarcc1P97496 Edc4-202ENSMUST00000119261 4645 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Smarcc1P97496 AC153380.1-201ENSMUST00000214959 2364 ntBASIC13.37□□□□□ -0.27
Smarcc1P97496 Tcp11l1-202ENSMUST00000111118 5474 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Smarcc1P97496 AC122291.1-201ENSMUST00000228937 5748 ntBASIC13.37□□□□□ -0.27
Smarcc1P97496 Eif5a2-201ENSMUST00000060500 5027 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Smarcc1P97496 Slurp1-202ENSMUST00000190433 2859 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Smarcc1P97496 Clec16a-201ENSMUST00000038145 3730 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Smarcc1P97496 Kctd10-202ENSMUST00000102581 3103 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Smarcc1P97496 Nrg1-202ENSMUST00000207417 3138 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Smarcc1P97496 F730016J06Rik-201ENSMUST00000126140 1344 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Smarcc1P97496 Gm20831-201ENSMUST00000177639 1337 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Smarcc1P97496 Ssty1-202ENSMUST00000186035 1341 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Smarcc1P97496 Gm20737-202ENSMUST00000187245 1338 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Smarcc1P97496 Gm20777-202ENSMUST00000187434 1341 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Smarcc1P97496 Gm20873-202ENSMUST00000187857 1342 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Smarcc1P97496 Gm20772-201ENSMUST00000188928 1343 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Smarcc1P97496 Gm21310-202ENSMUST00000189630 1343 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Smarcc1P97496 Gm20795-202ENSMUST00000190909 1344 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Smarcc1P97496 Gm21454-202ENSMUST00000192204 1343 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Smarcc1P97496 Gm21440-201ENSMUST00000192749 1344 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Smarcc1P97496 Gm20831-202ENSMUST00000194411 1344 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Smarcc1P97496 Gm20807-201ENSMUST00000194687 1336 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Smarcc1P97496 Gm21425-202ENSMUST00000195626 1345 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Smarcc1P97496 Adamts16-202ENSMUST00000109694 3378 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Smarcc1P97496 Vamp1-201ENSMUST00000032487 2772 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Smarcc1P97496 Tcirg1-204ENSMUST00000126070 3041 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Smarcc1P97496 Gm42849-201ENSMUST00000202834 1584 ntTSL 5 BASIC13.37□□□□□ -0.27
Smarcc1P97496 L3mbtl2-208ENSMUST00000174229 2578 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Smarcc1P97496 Vangl1-208ENSMUST00000168312 1740 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Smarcc1P97496 4933431E20Rik-201ENSMUST00000131345 5407 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Smarcc1P97496 Gtf2ird2-201ENSMUST00000016086 3482 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Smarcc1P97496 Mier3-201ENSMUST00000047412 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Smarcc1P97496 Ctss-201ENSMUST00000015667 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Smarcc1P97496 Igsf5-201ENSMUST00000000163 1851 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Smarcc1P97496 Sppl2b-211ENSMUST00000220091 3629 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Smarcc1P97496 4933434E20Rik-206ENSMUST00000160640 2510 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Smarcc1P97496 Plekhn1-202ENSMUST00000105571 2004 ntTSL 5 BASIC13.36□□□□□ -0.27
Smarcc1P97496 Gm13547-202ENSMUST00000113810 629 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Smarcc1P97496 Gm8482-201ENSMUST00000117972 471 ntBASIC13.36□□□□□ -0.27
Smarcc1P97496 Gm12377-201ENSMUST00000118656 252 ntBASIC13.36□□□□□ -0.27
Smarcc1P97496 Gm13841-201ENSMUST00000118829 483 ntBASIC13.36□□□□□ -0.27
Smarcc1P97496 Gm11449-201ENSMUST00000119175 476 ntBASIC13.36□□□□□ -0.27
Smarcc1P97496 Platr12-201ENSMUST00000141027 462 ntTSL 3 BASIC13.36□□□□□ -0.27
Smarcc1P97496 Muc2-202ENSMUST00000167366 711 ntTSL 5 BASIC13.36□□□□□ -0.27
Smarcc1P97496 Glmp-207ENSMUST00000176425 960 ntTSL 5 BASIC13.36□□□□□ -0.27
Smarcc1P97496 Gm26379-201ENSMUST00000178125 138 ntBASIC13.36□□□□□ -0.27
Smarcc1P97496 Gm8210-201ENSMUST00000178557 483 ntBASIC13.36□□□□□ -0.27
Smarcc1P97496 Gm15454-201ENSMUST00000179718 483 ntBASIC13.36□□□□□ -0.27
Smarcc1P97496 Rian-210ENSMUST00000182689 295 ntTSL 5 BASIC13.36□□□□□ -0.27
Smarcc1P97496 2310009A05Rik-201ENSMUST00000184126 496 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Smarcc1P97496 Gm5543-201ENSMUST00000193329 1091 ntBASIC13.36□□□□□ -0.27
Smarcc1P97496 Zfp787-203ENSMUST00000207331 376 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Smarcc1P97496 Gm8268-201ENSMUST00000209683 458 ntBASIC13.36□□□□□ -0.27
Smarcc1P97496 Gm3889-201ENSMUST00000212467 612 ntBASIC13.36□□□□□ -0.27
Smarcc1P97496 Gm32939-201ENSMUST00000222336 843 ntTSL 3 BASIC13.36□□□□□ -0.27
Smarcc1P97496 AC127583.1-201ENSMUST00000224351 540 ntBASIC13.36□□□□□ -0.27
Smarcc1P97496 Magoh-201ENSMUST00000030348 692 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Smarcc1P97496 Gm6344-201ENSMUST00000075962 483 ntBASIC13.36□□□□□ -0.27
Smarcc1P97496 Olfr1219-201ENSMUST00000099797 936 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
Smarcc1P97496 Gm34425-201ENSMUST00000216269 3079 ntTSL 5 BASIC13.36□□□□□ -0.27
Smarcc1P97496 Sh3gl2-201ENSMUST00000030212 2822 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Smarcc1P97496 Ncf1-202ENSMUST00000111275 2721 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Smarcc1P97496 Gm15541-201ENSMUST00000147449 2713 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Smarcc1P97496 A830018L16Rik-209ENSMUST00000179089 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Smarcc1P97496 Grm1-201ENSMUST00000044306 6930 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Smarcc1P97496 Cpn2-201ENSMUST00000064856 4583 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Smarcc1P97496 Ccr6-202ENSMUST00000164411 1553 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Smarcc1P97496 Lims1-201ENSMUST00000020077 1565 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Smarcc1P97496 Gm4316-201ENSMUST00000212411 2617 ntTSL 5 BASIC13.36□□□□□ -0.27
Smarcc1P97496 Umod-201ENSMUST00000033263 2625 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Smarcc1P97496 Pars2-202ENSMUST00000106781 3046 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Smarcc1P97496 Ahsa2-202ENSMUST00000109539 3583 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Smarcc1P97496 Gtf2ird1-206ENSMUST00000111244 3461 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Smarcc1P97496 Gm7190-201ENSMUST00000118669 1452 ntBASIC13.36□□□□□ -0.27
Smarcc1P97496 Pom121l2-201ENSMUST00000017126 2960 ntAPPRIS P4 BASIC13.35□□□□□ -0.27
Smarcc1P97496 Myo18b-201ENSMUST00000086617 8280 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Smarcc1P97496 Gfm1-201ENSMUST00000077271 4078 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Smarcc1P97496 Gm14025-201ENSMUST00000145798 4242 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Smarcc1P97496 Fbln2-201ENSMUST00000041544 4786 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Smarcc1P97496 Pde1b-205ENSMUST00000227955 3258 ntAPPRIS ALT1 BASIC13.35□□□□□ -0.27
Smarcc1P97496 Prnd-201ENSMUST00000110169 1918 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Smarcc1P97496 Plcd1-201ENSMUST00000010804 2657 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Smarcc1P97496 Mylip-202ENSMUST00000222178 1954 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 74.2 ms