Protein–RNA interactions for Protein: P20040

H-2 class II histocompatibility antigen, E-Q beta chain, mousemouse

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P20040 Gm17213-201ENSMUST00000165161 1360 ntBASIC9.47□□□□□ -0.89
P20040 Nav2-204ENSMUST00000183659 7765 ntAPPRIS ALT2 TSL 5 BASIC9.47□□□□□ -0.89
P20040 Pou2f1-204ENSMUST00000111426 2671 ntAPPRIS ALT2 TSL 5 BASIC9.47□□□□□ -0.89
P20040 Ccdc93-201ENSMUST00000036025 7274 ntAPPRIS P4 TSL 1 (best) BASIC9.47□□□□□ -0.89
P20040 Zfp410-215ENSMUST00000222832 1859 ntTSL 2 BASIC9.47□□□□□ -0.89
P20040 Pax6-204ENSMUST00000111083 2370 ntAPPRIS ALT1 TSL 5 BASIC9.46□□□□□ -0.89
P20040 4732490B19Rik-201ENSMUST00000130373 2446 ntTSL 1 (best) BASIC9.46□□□□□ -0.89
P20040 Cdkal1-202ENSMUST00000091674 2427 ntTSL 1 (best) BASIC9.46□□□□□ -0.89
P20040 Olfr463-202ENSMUST00000215150 2031 ntAPPRIS P1 TSL 5 BASIC9.46□□□□□ -0.89
P20040 Ddr1-203ENSMUST00000117301 3874 ntAPPRIS P3 TSL 1 (best) BASIC9.46□□□□□ -0.89
P20040 Zc3hav1-201ENSMUST00000031850 3400 ntTSL 1 (best) BASIC9.46□□□□□ -0.89
P20040 Aebp1-202ENSMUST00000109829 2541 ntAPPRIS ALT2 TSL 1 (best) BASIC9.46□□□□□ -0.89
P20040 Slc39a14-210ENSMUST00000152067 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC9.46□□□□□ -0.89
P20040 Tmem67-202ENSMUST00000108293 3945 ntAPPRIS ALT2 TSL 5 BASIC9.46□□□□□ -0.89
P20040 Adcy7-201ENSMUST00000098521 5937 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
P20040 Pitpnb-204ENSMUST00000200298 2632 ntAPPRIS ALT1 TSL 1 (best) BASIC9.46□□□□□ -0.89
P20040 6430548M08Rik-203ENSMUST00000108950 3125 ntAPPRIS P3 TSL 1 (best) BASIC9.46□□□□□ -0.89
P20040 Actbl2-201ENSMUST00000054716 2737 ntAPPRIS P1 BASIC9.46□□□□□ -0.89
P20040 Tsix-202ENSMUST00000211291 3263 ntTSL 5 BASIC9.46□□□□□ -0.89
P20040 Gm10169-201ENSMUST00000121822 348 ntBASIC9.46□□□□□ -0.9
P20040 Gm28037-201ENSMUST00000122365 611 ntTSL 3 BASIC9.46□□□□□ -0.9
P20040 Gm12714-201ENSMUST00000143391 669 ntTSL 3 BASIC9.46□□□□□ -0.9
P20040 Gm10631-201ENSMUST00000153288 494 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
P20040 Bloc1s1-205ENSMUST00000153731 613 ntTSL 5 BASIC9.46□□□□□ -0.9
P20040 AC158605.1-201ENSMUST00000156803 764 ntTSL 3 BASIC9.46□□□□□ -0.9
P20040 Man2c1-211ENSMUST00000160147 3820 ntAPPRIS P2 TSL 1 (best) BASIC9.46□□□□□ -0.9
P20040 Gm15744-201ENSMUST00000161734 213 ntBASIC9.46□□□□□ -0.9
P20040 Gm16938-201ENSMUST00000180517 464 ntTSL 5 BASIC9.46□□□□□ -0.9
P20040 Mir6407-201ENSMUST00000184510 101 ntBASIC9.46□□□□□ -0.9
P20040 Mrip-ps-201ENSMUST00000184613 940 ntBASIC9.46□□□□□ -0.9
P20040 Gm5100-201ENSMUST00000195631 589 ntBASIC9.46□□□□□ -0.9
P20040 Gm43401-201ENSMUST00000198829 394 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
P20040 Chn2-210ENSMUST00000203091 755 ntTSL 5 BASIC9.46□□□□□ -0.9
P20040 Gm30671-201ENSMUST00000214898 318 ntBASIC9.46□□□□□ -0.9
P20040 AC154436.1-201ENSMUST00000227272 782 ntBASIC9.46□□□□□ -0.9
P20040 Mitd1-201ENSMUST00000027257 1231 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
P20040 Smco2-201ENSMUST00000032433 1276 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
P20040 Uba52-201ENSMUST00000081940 541 ntAPPRIS P1 TSL 2 BASIC9.46□□□□□ -0.9
P20040 Mok-203ENSMUST00000084974 1132 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
P20040 Olfr76-201ENSMUST00000087822 1048 ntAPPRIS P1 BASIC9.46□□□□□ -0.9
P20040 Taar8b-201ENSMUST00000092654 1035 ntAPPRIS P1 BASIC9.46□□□□□ -0.9
P20040 n-R5s211-201ENSMUST00000093689 119 ntBASIC9.46□□□□□ -0.9
P20040 Olfr1047-201ENSMUST00000099901 960 ntAPPRIS P1 BASIC9.46□□□□□ -0.9
P20040 Eid3-201ENSMUST00000211623 1305 ntAPPRIS P1 BASIC9.46□□□□□ -0.9
P20040 Pard3-201ENSMUST00000026921 4050 ntAPPRIS ALT2 TSL 1 (best) BASIC9.46□□□□□ -0.9
P20040 Pdcd10-205ENSMUST00000161137 1927 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
P20040 Nlrx1-201ENSMUST00000034621 3669 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
P20040 Adcy7-204ENSMUST00000171456 5951 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
P20040 Astn1-205ENSMUST00000193042 7248 ntAPPRIS P3 TSL 1 (best) BASIC9.46□□□□□ -0.9
P20040 Pax6-206ENSMUST00000111086 2601 ntAPPRIS P3 TSL 1 (best) BASIC9.46□□□□□ -0.9
P20040 Itgad-204ENSMUST00000177111 3845 ntAPPRIS ALT2 TSL 5 BASIC9.46□□□□□ -0.9
P20040 A530032D15Rik-201ENSMUST00000160792 1492 ntAPPRIS P2 TSL 1 (best) BASIC9.46□□□□□ -0.9
P20040 Gm37651-201ENSMUST00000194679 1494 ntBASIC9.46□□□□□ -0.9
P20040 Fopnl-201ENSMUST00000023357 1465 ntAPPRIS P2 TSL 1 (best) BASIC9.46□□□□□ -0.9
P20040 Aoc1-201ENSMUST00000031835 2675 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
P20040 Vwf-203ENSMUST00000112254 8834 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
P20040 Zfp775-201ENSMUST00000061720 4083 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
P20040 Gm44153-201ENSMUST00000204162 1580 ntBASIC9.46□□□□□ -0.9
P20040 Ndufab1-201ENSMUST00000033157 3479 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
P20040 Ncoa1-209ENSMUST00000220434 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC9.46□□□□□ -0.9
P20040 Odf2-207ENSMUST00000113762 2353 ntTSL 5 BASIC9.45□□□□□ -0.9
P20040 Gm15832-201ENSMUST00000146314 1832 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
P20040 Atp6v0a4-202ENSMUST00000114908 3307 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
P20040 Robo4-203ENSMUST00000115048 3392 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
P20040 Dcaf11-206ENSMUST00000128490 2660 ntAPPRIS P2 TSL 2 BASIC9.45□□□□□ -0.9
P20040 Mta1-202ENSMUST00000069690 2697 ntAPPRIS ALT2 TSL 5 BASIC9.45□□□□□ -0.9
P20040 Ctnnd1-205ENSMUST00000111670 5047 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
P20040 Traip-201ENSMUST00000049348 2706 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
P20040 Cct3-201ENSMUST00000001452 1977 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
P20040 Rnasel-204ENSMUST00000182538 2761 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
P20040 Lct-201ENSMUST00000073490 6174 ntAPPRIS P1 TSL 2 BASIC9.45□□□□□ -0.9
P20040 Gm25063-201ENSMUST00000104666 94 ntBASIC9.45□□□□□ -0.9
P20040 Krtap4-9-201ENSMUST00000105059 1059 ntAPPRIS P1 BASIC9.45□□□□□ -0.9
P20040 Tomm5-201ENSMUST00000107807 442 ntTSL 2 BASIC9.45□□□□□ -0.9
P20040 Gm14398-201ENSMUST00000117287 1073 ntBASIC9.45□□□□□ -0.9
P20040 Gm4917-201ENSMUST00000121452 650 ntBASIC9.45□□□□□ -0.9
P20040 4930583K01Rik-201ENSMUST00000138180 925 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
P20040 Rps28-203ENSMUST00000173019 437 ntAPPRIS P1 TSL 3 BASIC9.45□□□□□ -0.9
P20040 Olfr755-ps1-201ENSMUST00000173568 910 ntBASIC9.45□□□□□ -0.9
P20040 Gm20714-202ENSMUST00000176436 748 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
P20040 Gm10100-201ENSMUST00000179726 363 ntAPPRIS P1 BASIC9.45□□□□□ -0.9
P20040 1110036E04Rik-201ENSMUST00000181151 777 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
P20040 Sox2ot-217ENSMUST00000200414 710 ntTSL 3 BASIC9.45□□□□□ -0.9
P20040 Crcp-204ENSMUST00000202163 931 ntTSL 2 BASIC9.45□□□□□ -0.9
P20040 Itgax-203ENSMUST00000205460 1215 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
P20040 Cdipt-204ENSMUST00000206346 806 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
P20040 Gm5599-201ENSMUST00000209602 788 ntBASIC9.45□□□□□ -0.9
P20040 Gm10752-201ENSMUST00000218348 729 ntBASIC9.45□□□□□ -0.9
P20040 Itih3-205ENSMUST00000227995 2100 ntAPPRIS ALT2 BASIC9.45□□□□□ -0.9
P20040 Nme6-201ENSMUST00000035053 1074 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
P20040 Rtn4ip1-201ENSMUST00000054418 2981 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
P20040 Gm9244-201ENSMUST00000056767 2129 ntBASIC9.45□□□□□ -0.9
P20040 Olfr889-201ENSMUST00000072290 945 ntTSL 5 BASIC9.45□□□□□ -0.9
P20040 Aurkc-203ENSMUST00000207711 1320 ntAPPRIS ALT2 TSL 1 (best) BASIC9.45□□□□□ -0.9
P20040 Mrps23-201ENSMUST00000024486 1332 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
P20040 Rad18-204ENSMUST00000113182 2220 ntAPPRIS ALT2 TSL 5 BASIC9.45□□□□□ -0.9
P20040 AC160562.2-201ENSMUST00000216374 2201 ntTSL 2 BASIC9.45□□□□□ -0.9
P20040 Ccdc136-202ENSMUST00000115275 3279 ntAPPRIS ALT2 TSL 5 BASIC9.45□□□□□ -0.9
P20040 Gosr2-201ENSMUST00000021329 3266 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
P20040 Rpgr-202ENSMUST00000072393 2380 ntAPPRIS ALT2 TSL 2 BASIC9.45□□□□□ -0.9
Retrieved 100 of 76,532 protein–RNA pairs in 53.6 ms