Protein–RNA interactions for Protein: J3QNE4

Ccdc180, Coiled-coil domain-containing 180, mousemouse

Predictions only

Length 1,664 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc180J3QNE4 Eme2-201ENSMUST00000119848 5226 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Ccdc180J3QNE4 Gm3532-201ENSMUST00000181880 1396 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
Ccdc180J3QNE4 Inpp4a-211ENSMUST00000168546 2964 ntTSL 5 BASIC19.17■□□□□ 0.66
Ccdc180J3QNE4 Slc4a9-201ENSMUST00000074298 2714 ntAPPRIS P3 TSL 5 BASIC19.17■□□□□ 0.66
Ccdc180J3QNE4 Ppp1r10-202ENSMUST00000087211 4255 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
Ccdc180J3QNE4 Sgca-201ENSMUST00000100551 1465 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ccdc180J3QNE4 Eogt-201ENSMUST00000054344 4424 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ccdc180J3QNE4 Derl2-202ENSMUST00000108523 884 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Ccdc180J3QNE4 Gm4868-201ENSMUST00000164138 789 ntBASIC19.17■□□□□ 0.66
Ccdc180J3QNE4 Gm2663-201ENSMUST00000166306 862 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ccdc180J3QNE4 Gm46189-201ENSMUST00000219395 644 ntTSL 3 BASIC19.17■□□□□ 0.66
Ccdc180J3QNE4 Gm5951-201ENSMUST00000220283 504 ntBASIC19.17■□□□□ 0.66
Ccdc180J3QNE4 Rpl21-ps2-201ENSMUST00000222933 481 ntBASIC19.17■□□□□ 0.66
Ccdc180J3QNE4 AC116797.2-203ENSMUST00000225290 565 ntBASIC19.17■□□□□ 0.66
Ccdc180J3QNE4 Hspb11-201ENSMUST00000046558 608 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ccdc180J3QNE4 Gm16429-202ENSMUST00000201400 1848 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ccdc180J3QNE4 Gm7971-201ENSMUST00000086950 1848 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
Ccdc180J3QNE4 Fam180a-201ENSMUST00000051176 1606 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ccdc180J3QNE4 Spert-201ENSMUST00000035243 1430 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ccdc180J3QNE4 Slc7a9-203ENSMUST00000118969 1765 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ccdc180J3QNE4 H2-M10.3-201ENSMUST00000073546 1593 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ccdc180J3QNE4 Unkl-201ENSMUST00000015271 3414 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Ccdc180J3QNE4 Gm5910-201ENSMUST00000211819 1746 ntBASIC19.16■□□□□ 0.66
Ccdc180J3QNE4 Gm16499-201ENSMUST00000204648 2065 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Ccdc180J3QNE4 Etv3-205ENSMUST00000170036 5127 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ccdc180J3QNE4 Exoc7-201ENSMUST00000021147 3337 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Ccdc180J3QNE4 Myh3-203ENSMUST00000165221 5994 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
Ccdc180J3QNE4 Pin1-201ENSMUST00000034689 3843 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ccdc180J3QNE4 Parvg-207ENSMUST00000163667 2700 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
Ccdc180J3QNE4 Rapgef3-205ENSMUST00000129223 3750 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Ccdc180J3QNE4 Lrrc57-201ENSMUST00000102496 1848 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ccdc180J3QNE4 Gm10842-201ENSMUST00000100338 369 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
Ccdc180J3QNE4 Oosp2-201ENSMUST00000121793 677 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ccdc180J3QNE4 Gm16581-201ENSMUST00000160730 991 ntBASIC19.16■□□□□ 0.66
Ccdc180J3QNE4 Gm16008-203ENSMUST00000181389 480 ntTSL 3 BASIC19.16■□□□□ 0.66
Ccdc180J3QNE4 Gm8268-201ENSMUST00000209683 458 ntBASIC19.16■□□□□ 0.66
Ccdc180J3QNE4 Gm31374-201ENSMUST00000213885 619 ntTSL 5 BASIC19.16■□□□□ 0.66
Ccdc180J3QNE4 Gzmf-201ENSMUST00000022757 919 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ccdc180J3QNE4 Fam210b-201ENSMUST00000028995 3617 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ccdc180J3QNE4 Bdkrb2-201ENSMUST00000001652 3792 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ccdc180J3QNE4 4930593A02Rik-201ENSMUST00000181694 1437 ntTSL 5 BASIC19.16■□□□□ 0.66
Ccdc180J3QNE4 Nlrc3-203ENSMUST00000177551 5403 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
Ccdc180J3QNE4 Ano1-201ENSMUST00000033393 4585 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
Ccdc180J3QNE4 Pabpc5-202ENSMUST00000113366 2243 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
Ccdc180J3QNE4 Sfrp4-203ENSMUST00000222464 4049 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Ccdc180J3QNE4 Smtn-203ENSMUST00000075118 3117 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Ccdc180J3QNE4 Emx2os-201ENSMUST00000136990 5023 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Ccdc180J3QNE4 Sfxn1-201ENSMUST00000021930 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ccdc180J3QNE4 Hgs-202ENSMUST00000106203 2901 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
Ccdc180J3QNE4 Steap3-201ENSMUST00000112639 2931 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ccdc180J3QNE4 Eif4g1-217ENSMUST00000143939 5114 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
Ccdc180J3QNE4 Dcun1d3-202ENSMUST00000098080 3072 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ccdc180J3QNE4 Slitrk4-202ENSMUST00000114679 3513 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ccdc180J3QNE4 Mrps23-201ENSMUST00000024486 1332 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ccdc180J3QNE4 Gm45397-201ENSMUST00000209816 1600 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Ccdc180J3QNE4 Zfp42-201ENSMUST00000082120 1772 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ccdc180J3QNE4 Rhox10-201ENSMUST00000115150 763 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ccdc180J3QNE4 Gm15702-201ENSMUST00000119680 444 ntBASIC19.15■□□□□ 0.66
Ccdc180J3QNE4 AA623943-201ENSMUST00000121794 354 ntBASIC19.15■□□□□ 0.66
Ccdc180J3QNE4 Gm22763-201ENSMUST00000158374 107 ntBASIC19.15■□□□□ 0.66
Ccdc180J3QNE4 Rpl17-ps11-201ENSMUST00000161946 729 ntBASIC19.15■□□□□ 0.66
Ccdc180J3QNE4 Cpvl-201ENSMUST00000166545 1597 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ccdc180J3QNE4 Gm4925-202ENSMUST00000168843 1561 ntBASIC19.15■□□□□ 0.66
Ccdc180J3QNE4 Gfra1-209ENSMUST00000169850 3224 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ccdc180J3QNE4 Trav9n-1-201ENSMUST00000185224 339 ntBASIC19.15■□□□□ 0.66
Ccdc180J3QNE4 Gm17541-201ENSMUST00000080062 525 ntBASIC19.15■□□□□ 0.66
Ccdc180J3QNE4 Olfr279-202ENSMUST00000205772 5330 ntAPPRIS P1 TSL 3 BASIC19.15■□□□□ 0.66
Ccdc180J3QNE4 Gm26735-201ENSMUST00000180992 2649 ntTSL 5 BASIC19.15■□□□□ 0.66
Ccdc180J3QNE4 Prkcd-201ENSMUST00000022521 2612 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ccdc180J3QNE4 Trappc5-202ENSMUST00000207787 4411 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
Ccdc180J3QNE4 Crispld2-202ENSMUST00000108972 2928 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ccdc180J3QNE4 Ttc23-203ENSMUST00000107471 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.66
Ccdc180J3QNE4 Gm29617-201ENSMUST00000185730 610 ntBASIC19.14■□□□□ 0.66
Ccdc180J3QNE4 Gm21083-201ENSMUST00000188807 1141 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Ccdc180J3QNE4 Nme6-206ENSMUST00000197627 905 ntTSL 3 BASIC19.14■□□□□ 0.66
Ccdc180J3QNE4 Gm6304-201ENSMUST00000096579 447 ntBASIC19.14■□□□□ 0.66
Ccdc180J3QNE4 Kbtbd12-206ENSMUST00000184878 3351 ntTSL 5 BASIC19.14■□□□□ 0.66
Ccdc180J3QNE4 Tmem135-202ENSMUST00000117852 2986 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
Ccdc180J3QNE4 Celsr1-201ENSMUST00000016172 10879 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Ccdc180J3QNE4 Gm44664-201ENSMUST00000206841 1786 ntBASIC19.14■□□□□ 0.65
Ccdc180J3QNE4 Mx2-201ENSMUST00000024112 2417 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Ccdc180J3QNE4 Btn2a2-204ENSMUST00000223877 2109 ntAPPRIS ALT2 BASIC19.14■□□□□ 0.65
Ccdc180J3QNE4 Ccdc130-202ENSMUST00000098578 2119 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
Ccdc180J3QNE4 1700019D03Rik-201ENSMUST00000050567 3641 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Ccdc180J3QNE4 AI661453-202ENSMUST00000150819 4866 ntAPPRIS P2 TSL 5 BASIC19.14■□□□□ 0.65
Ccdc180J3QNE4 Kcnj3-201ENSMUST00000067101 5215 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Ccdc180J3QNE4 Papss1-206ENSMUST00000200527 2811 ntTSL 5 BASIC19.14■□□□□ 0.65
Ccdc180J3QNE4 Abhd4-201ENSMUST00000041197 2401 ntAPPRIS P4 TSL 1 (best) BASIC19.14■□□□□ 0.65
Ccdc180J3QNE4 Gm39464-201ENSMUST00000214091 2169 ntTSL 5 BASIC19.14■□□□□ 0.65
Ccdc180J3QNE4 Gm7061-201ENSMUST00000118127 1416 ntBASIC19.14■□□□□ 0.65
Ccdc180J3QNE4 Gm44547-201ENSMUST00000207793 1446 ntBASIC19.14■□□□□ 0.65
Ccdc180J3QNE4 Gm45187-201ENSMUST00000207697 2760 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Ccdc180J3QNE4 Abca3-201ENSMUST00000039013 6476 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Ccdc180J3QNE4 Mcm2-201ENSMUST00000058011 3371 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Ccdc180J3QNE4 Zfp354c-202ENSMUST00000109135 5325 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Ccdc180J3QNE4 Pcgf5-202ENSMUST00000071267 1508 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Ccdc180J3QNE4 Gm13629-201ENSMUST00000141149 1022 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Ccdc180J3QNE4 Gm23479-201ENSMUST00000158876 122 ntBASIC19.14■□□□□ 0.65
Ccdc180J3QNE4 Gm26379-201ENSMUST00000178125 138 ntBASIC19.14■□□□□ 0.65
Ccdc180J3QNE4 4930515G16Rik-201ENSMUST00000199440 1256 ntBASIC19.14■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 179.6 ms