Protein–RNA interactions for Protein: F6SEU4

Syngap1, Ras/Rap GTPase-activating protein SynGAP, mousemouse

Predictions only

Length 1,340 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syngap1F6SEU4 Gm12435-201ENSMUST00000118949 1016 ntBASIC12.07□□□□□ -0.48
Syngap1F6SEU4 Gm14639-201ENSMUST00000120850 866 ntBASIC12.07□□□□□ -0.48
Syngap1F6SEU4 Gm15727-201ENSMUST00000122416 437 ntBASIC12.07□□□□□ -0.48
Syngap1F6SEU4 Gm13465-201ENSMUST00000129687 979 ntTSL 2 BASIC12.07□□□□□ -0.48
Syngap1F6SEU4 Gm25154-201ENSMUST00000157123 119 ntBASIC12.07□□□□□ -0.48
Syngap1F6SEU4 n-R5s130-201ENSMUST00000178128 119 ntBASIC12.07□□□□□ -0.48
Syngap1F6SEU4 Gm24312-201ENSMUST00000178677 119 ntBASIC12.07□□□□□ -0.48
Syngap1F6SEU4 n-R5s106-201ENSMUST00000179060 119 ntBASIC12.07□□□□□ -0.48
Syngap1F6SEU4 n-R5s118-201ENSMUST00000179887 119 ntBASIC12.07□□□□□ -0.48
Syngap1F6SEU4 Gm27316-201ENSMUST00000184884 277 ntBASIC12.07□□□□□ -0.48
Syngap1F6SEU4 Gm37723-201ENSMUST00000194480 565 ntBASIC12.07□□□□□ -0.48
Syngap1F6SEU4 9530062K07Rik-201ENSMUST00000203332 787 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Syngap1F6SEU4 Gm32786-201ENSMUST00000211351 628 ntTSL 3 BASIC12.07□□□□□ -0.48
Syngap1F6SEU4 AC148334.1-201ENSMUST00000220853 370 ntTSL 5 BASIC12.07□□□□□ -0.48
Syngap1F6SEU4 AC122357.1-202ENSMUST00000221436 633 ntTSL 2 BASIC12.07□□□□□ -0.48
Syngap1F6SEU4 AC134793.1-202ENSMUST00000227444 803 ntBASIC12.07□□□□□ -0.48
Syngap1F6SEU4 Ccl25-201ENSMUST00000024004 1058 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Syngap1F6SEU4 Clpsl2-201ENSMUST00000025061 442 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Syngap1F6SEU4 Dcpp2-201ENSMUST00000088598 611 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Syngap1F6SEU4 Gm37422-201ENSMUST00000193794 4718 ntBASIC12.07□□□□□ -0.48
Syngap1F6SEU4 Crkl-201ENSMUST00000006293 3863 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Syngap1F6SEU4 Fam26e-201ENSMUST00000069125 5323 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Syngap1F6SEU4 Setdb1-202ENSMUST00000107170 4622 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Syngap1F6SEU4 Abcc10-202ENSMUST00000095261 5266 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Syngap1F6SEU4 9530082P21Rik-203ENSMUST00000181605 3162 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Syngap1F6SEU4 Gtf2a1-202ENSMUST00000063314 2265 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Syngap1F6SEU4 Col6a6-202ENSMUST00000098441 8781 ntAPPRIS P2 TSL 5 BASIC12.06□□□□□ -0.48
Syngap1F6SEU4 Synj2-203ENSMUST00000115784 2634 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Syngap1F6SEU4 Cinp-201ENSMUST00000043716 2029 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Syngap1F6SEU4 Gm19299-202ENSMUST00000215724 1435 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Syngap1F6SEU4 Aff3-203ENSMUST00000095027 5857 ntAPPRIS P2 TSL 5 BASIC12.06□□□□□ -0.48
Syngap1F6SEU4 Srrt-201ENSMUST00000040873 3024 ntAPPRIS P3 TSL 5 BASIC12.06□□□□□ -0.48
Syngap1F6SEU4 Gm26794-201ENSMUST00000180810 4312 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Syngap1F6SEU4 Tcp11l2-201ENSMUST00000020223 2725 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Syngap1F6SEU4 Slc43a1-204ENSMUST00000121114 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Syngap1F6SEU4 Gm44415-201ENSMUST00000204151 2112 ntBASIC12.06□□□□□ -0.48
Syngap1F6SEU4 Dixdc1-203ENSMUST00000117646 5719 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Syngap1F6SEU4 Radil-203ENSMUST00000110784 3106 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Syngap1F6SEU4 Flad1-202ENSMUST00000107426 2238 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Syngap1F6SEU4 Cacna1s-202ENSMUST00000112068 6018 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Syngap1F6SEU4 Kng2-203ENSMUST00000115349 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Syngap1F6SEU4 Nrf1-201ENSMUST00000004761 1589 ntTSL 5 BASIC12.06□□□□□ -0.48
Syngap1F6SEU4 Cntd1-201ENSMUST00000103107 2335 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Syngap1F6SEU4 Dcaf12-201ENSMUST00000030145 3442 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Syngap1F6SEU4 Flvcr2-201ENSMUST00000040461 3435 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Syngap1F6SEU4 Psme2-201ENSMUST00000111378 795 ntTSL 5 BASIC12.06□□□□□ -0.48
Syngap1F6SEU4 Gm13002-201ENSMUST00000119286 682 ntBASIC12.06□□□□□ -0.48
Syngap1F6SEU4 Gm15793-201ENSMUST00000121857 495 ntBASIC12.06□□□□□ -0.48
Syngap1F6SEU4 Piga-204ENSMUST00000133813 1086 ntTSL 5 BASIC12.06□□□□□ -0.48
Syngap1F6SEU4 Aamdc-206ENSMUST00000136757 789 ntAPPRIS P1 TSL 2 BASIC12.06□□□□□ -0.48
Syngap1F6SEU4 Gm12907-201ENSMUST00000148027 507 ntTSL 2 BASIC12.06□□□□□ -0.48
Syngap1F6SEU4 Pax5-212ENSMUST00000173733 885 ntTSL 5 BASIC12.06□□□□□ -0.48
Syngap1F6SEU4 A630023A22Rik-201ENSMUST00000178958 1277 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Syngap1F6SEU4 2700099C18Rik-203ENSMUST00000182475 969 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Syngap1F6SEU4 Gm43460-201ENSMUST00000202491 1057 ntBASIC12.06□□□□□ -0.48
Syngap1F6SEU4 Zkscan7-205ENSMUST00000216462 990 ntBASIC12.06□□□□□ -0.48
Syngap1F6SEU4 4930458K08Rik-201ENSMUST00000219952 1264 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Syngap1F6SEU4 Gm22341-201ENSMUST00000083775 129 ntBASIC12.06□□□□□ -0.48
Syngap1F6SEU4 Gm40377-201ENSMUST00000204604 2015 ntBASIC12.06□□□□□ -0.48
Syngap1F6SEU4 Dennd4c-202ENSMUST00000082026 7940 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Syngap1F6SEU4 Ccpg1-201ENSMUST00000037977 3151 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Syngap1F6SEU4 Gm9544-201ENSMUST00000223349 2482 ntBASIC12.06□□□□□ -0.48
Syngap1F6SEU4 Ceacam1-205ENSMUST00000206171 1722 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Syngap1F6SEU4 Tas1r2-202ENSMUST00000166773 2524 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Syngap1F6SEU4 Btrc-209ENSMUST00000224478 2194 ntBASIC12.05□□□□□ -0.48
Syngap1F6SEU4 Rcor3-202ENSMUST00000110849 3791 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Syngap1F6SEU4 Spef2-203ENSMUST00000159368 1422 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Syngap1F6SEU4 Olfr171-202ENSMUST00000205467 1406 ntAPPRIS ALT1 TSL 2 BASIC12.05□□□□□ -0.48
Syngap1F6SEU4 CT030159.3-201ENSMUST00000222936 1481 ntTSL 5 BASIC12.05□□□□□ -0.48
Syngap1F6SEU4 Zfp772-201ENSMUST00000074455 2777 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Syngap1F6SEU4 Mirg-201ENSMUST00000181496 1906 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Syngap1F6SEU4 AC153380.1-201ENSMUST00000214959 2364 ntBASIC12.05□□□□□ -0.48
Syngap1F6SEU4 Pabpc1l-201ENSMUST00000067715 2354 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Syngap1F6SEU4 Igsf9-201ENSMUST00000052629 4133 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Syngap1F6SEU4 Slc38a5-202ENSMUST00000115590 1983 ntAPPRIS ALT2 TSL 2 BASIC12.05□□□□□ -0.48
Syngap1F6SEU4 Cdip1-202ENSMUST00000117713 1964 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Syngap1F6SEU4 Lims1-201ENSMUST00000020077 1565 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Syngap1F6SEU4 Ces5a-203ENSMUST00000212009 2042 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Syngap1F6SEU4 Ankrd55-202ENSMUST00000056047 1556 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Syngap1F6SEU4 Gm31518-201ENSMUST00000211925 2548 ntTSL 5 BASIC12.05□□□□□ -0.48
Syngap1F6SEU4 Rasgrp4-210ENSMUST00000203070 3008 ntTSL 5 BASIC12.05□□□□□ -0.48
Syngap1F6SEU4 Pphln1-201ENSMUST00000049122 4023 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Syngap1F6SEU4 AC113282.5-201ENSMUST00000224330 1679 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
Syngap1F6SEU4 AC159195.3-201ENSMUST00000225162 2211 ntBASIC12.05□□□□□ -0.48
Syngap1F6SEU4 Ank2-221ENSMUST00000182994 2715 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Syngap1F6SEU4 Gm45187-201ENSMUST00000207697 2760 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Syngap1F6SEU4 Scp2-202ENSMUST00000106701 772 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Syngap1F6SEU4 Gm15033-201ENSMUST00000118188 673 ntBASIC12.05□□□□□ -0.48
Syngap1F6SEU4 Gm14633-201ENSMUST00000121152 470 ntBASIC12.05□□□□□ -0.48
Syngap1F6SEU4 Scgb1b27-202ENSMUST00000173387 762 ntAPPRIS ALT2 TSL 2 BASIC12.05□□□□□ -0.48
Syngap1F6SEU4 Gm29521-201ENSMUST00000187061 745 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Syngap1F6SEU4 Gm21631-201ENSMUST00000195041 754 ntBASIC12.05□□□□□ -0.48
Syngap1F6SEU4 Gm44487-201ENSMUST00000205145 325 ntBASIC12.05□□□□□ -0.48
Syngap1F6SEU4 Rpl15-ps5-201ENSMUST00000205636 605 ntBASIC12.05□□□□□ -0.48
Syngap1F6SEU4 Olfr700-201ENSMUST00000079936 951 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
Syngap1F6SEU4 Fdps-201ENSMUST00000081848 1237 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Syngap1F6SEU4 Gm8618-201ENSMUST00000097570 432 ntBASIC12.05□□□□□ -0.48
Syngap1F6SEU4 Brat1-201ENSMUST00000041588 3333 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Syngap1F6SEU4 Cwc25-202ENSMUST00000107579 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Syngap1F6SEU4 Chil1-207ENSMUST00000153856 1839 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 60.5 ms