Protein–RNA interactions for Protein: Q9DBU5

Rnf6, E3 ubiquitin-protein ligase RNF6, mousemouse

Predictions only

Length 667 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf6Q9DBU5 1700084F23Rik-202ENSMUST00000188461 747 ntTSL 3 BASIC11.43□□□□□ -0.58
Rnf6Q9DBU5 E230014E18Rik-201ENSMUST00000215920 859 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Rnf6Q9DBU5 Gm19990-201ENSMUST00000219468 1224 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Rnf6Q9DBU5 AC134601.2-201ENSMUST00000221071 130 ntBASIC11.43□□□□□ -0.58
Rnf6Q9DBU5 Gm36074-201ENSMUST00000221383 591 ntTSL 5 BASIC11.43□□□□□ -0.58
Rnf6Q9DBU5 Atp6v1g1-201ENSMUST00000035301 1135 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Rnf6Q9DBU5 Ptpn11-201ENSMUST00000054547 5535 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
Rnf6Q9DBU5 Gm8181-201ENSMUST00000062242 669 ntBASIC11.43□□□□□ -0.58
Rnf6Q9DBU5 Nrap-202ENSMUST00000073536 5501 ntAPPRIS P4 TSL 1 (best) BASIC11.43□□□□□ -0.58
Rnf6Q9DBU5 Trpv1-203ENSMUST00000108470 2667 ntTSL 5 BASIC11.43□□□□□ -0.58
Rnf6Q9DBU5 Gm7052-201ENSMUST00000167568 1512 ntBASIC11.43□□□□□ -0.58
Rnf6Q9DBU5 Stx17-203ENSMUST00000107721 1771 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Rnf6Q9DBU5 Gm15604-201ENSMUST00000118350 1456 ntBASIC11.43□□□□□ -0.58
Rnf6Q9DBU5 Bckdk-207ENSMUST00000206745 1702 ntTSL 5 BASIC11.43□□□□□ -0.58
Rnf6Q9DBU5 Rassf4-201ENSMUST00000035842 6460 ntAPPRIS P2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Rnf6Q9DBU5 Dhx34-202ENSMUST00000118795 4076 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
Rnf6Q9DBU5 Tox4-201ENSMUST00000022766 5350 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
Rnf6Q9DBU5 Spert-201ENSMUST00000035243 1430 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
Rnf6Q9DBU5 Mkrn1-204ENSMUST00000114823 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Rnf6Q9DBU5 Slc6a20b-201ENSMUST00000026273 6307 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Rnf6Q9DBU5 Gm45719-201ENSMUST00000207954 1662 ntBASIC11.43□□□□□ -0.58
Rnf6Q9DBU5 Gm45012-201ENSMUST00000208323 1666 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Rnf6Q9DBU5 Olfr223-202ENSMUST00000215626 1695 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
Rnf6Q9DBU5 Gm18262-201ENSMUST00000222560 1946 ntBASIC11.43□□□□□ -0.58
Rnf6Q9DBU5 Fam53a-203ENSMUST00000065162 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Rnf6Q9DBU5 Afap1-201ENSMUST00000064571 6618 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Rnf6Q9DBU5 Kcnh3-201ENSMUST00000041415 3583 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Rnf6Q9DBU5 Hottip-201ENSMUST00000141300 2346 ntTSL 2 BASIC11.42□□□□□ -0.58
Rnf6Q9DBU5 Cd247-205ENSMUST00000161559 1816 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Rnf6Q9DBU5 Pcdhga10-201ENSMUST00000193404 4732 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Rnf6Q9DBU5 4930579F01Rik-202ENSMUST00000199293 1598 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Rnf6Q9DBU5 Ptgfr-201ENSMUST00000029670 6624 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Rnf6Q9DBU5 Hspa2-201ENSMUST00000080449 2524 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Rnf6Q9DBU5 Lin54-210ENSMUST00000154921 3734 ntTSL 5 BASIC11.42□□□□□ -0.58
Rnf6Q9DBU5 Scnn1g-201ENSMUST00000000221 2991 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Rnf6Q9DBU5 Olfr463-203ENSMUST00000217095 1977 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
Rnf6Q9DBU5 Cd27-203ENSMUST00000112282 588 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Rnf6Q9DBU5 Crygc-202ENSMUST00000114064 612 ntAPPRIS ALT1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Rnf6Q9DBU5 Gm11560-201ENSMUST00000117567 948 ntBASIC11.42□□□□□ -0.58
Rnf6Q9DBU5 Gm14006-201ENSMUST00000122132 981 ntBASIC11.42□□□□□ -0.58
Rnf6Q9DBU5 4921508D12Rik-201ENSMUST00000124095 1075 ntTSL 2 BASIC11.42□□□□□ -0.58
Rnf6Q9DBU5 Gm15507-201ENSMUST00000133523 592 ntTSL 5 BASIC11.42□□□□□ -0.58
Rnf6Q9DBU5 4930538E20Rik-202ENSMUST00000146717 497 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Rnf6Q9DBU5 Nop16-202ENSMUST00000148222 790 ntTSL 5 BASIC11.42□□□□□ -0.58
Rnf6Q9DBU5 Gm20822-201ENSMUST00000165756 687 ntAPPRIS P1 BASIC11.42□□□□□ -0.58
Rnf6Q9DBU5 Gm20828-201ENSMUST00000170889 687 ntAPPRIS P1 BASIC11.42□□□□□ -0.58
Rnf6Q9DBU5 Gm27953-201ENSMUST00000185171 143 ntBASIC11.42□□□□□ -0.58
Rnf6Q9DBU5 Gm28324-201ENSMUST00000187913 264 ntBASIC11.42□□□□□ -0.58
Rnf6Q9DBU5 Prm2-202ENSMUST00000189593 674 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
Rnf6Q9DBU5 1700039I01Rik-201ENSMUST00000194370 479 ntBASIC11.42□□□□□ -0.58
Rnf6Q9DBU5 Gm43001-201ENSMUST00000198925 603 ntTSL 3 BASIC11.42□□□□□ -0.58
Rnf6Q9DBU5 Gm44498-201ENSMUST00000199509 111 ntBASIC11.42□□□□□ -0.58
Rnf6Q9DBU5 Gm45219-201ENSMUST00000205602 465 ntBASIC11.42□□□□□ -0.58
Rnf6Q9DBU5 Olfr567-ps1-201ENSMUST00000210349 857 ntBASIC11.42□□□□□ -0.58
Rnf6Q9DBU5 4930449E01Rik-201ENSMUST00000022711 595 ntTSL 2 BASIC11.42□□□□□ -0.58
Rnf6Q9DBU5 Ank1-204ENSMUST00000117270 5652 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
Rnf6Q9DBU5 Phf8-202ENSMUST00000046962 3105 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
Rnf6Q9DBU5 Smpd4-218ENSMUST00000170273 2166 ntTSL 5 BASIC11.42□□□□□ -0.58
Rnf6Q9DBU5 AC144938.1-201ENSMUST00000223994 2167 ntBASIC11.42□□□□□ -0.58
Rnf6Q9DBU5 Atp9b-201ENSMUST00000091790 5357 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
Rnf6Q9DBU5 Fbxl5-202ENSMUST00000087465 4237 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Rnf6Q9DBU5 Gm10548-201ENSMUST00000097631 2629 ntBASIC11.42□□□□□ -0.58
Rnf6Q9DBU5 Myocd-203ENSMUST00000108695 5114 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Rnf6Q9DBU5 Ctnnd1-204ENSMUST00000099941 5783 ntTSL 5 BASIC11.42□□□□□ -0.58
Rnf6Q9DBU5 Dzip1l-203ENSMUST00000112885 4350 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
Rnf6Q9DBU5 Psd-202ENSMUST00000096029 3903 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
Rnf6Q9DBU5 Zfp36-201ENSMUST00000051241 2790 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Rnf6Q9DBU5 Fbxl18-202ENSMUST00000110766 7857 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Rnf6Q9DBU5 Gm38025-201ENSMUST00000193926 2308 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Rnf6Q9DBU5 Scamp1-203ENSMUST00000152555 1877 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Rnf6Q9DBU5 4930578C19Rik-201ENSMUST00000044188 1896 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Rnf6Q9DBU5 Acnat1-202ENSMUST00000107697 1446 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
Rnf6Q9DBU5 Gm15965-201ENSMUST00000123318 1428 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Rnf6Q9DBU5 Gm11986-201ENSMUST00000149481 1439 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Rnf6Q9DBU5 Ces2f-203ENSMUST00000212926 1430 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Rnf6Q9DBU5 Ptbp3-201ENSMUST00000030076 6855 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Rnf6Q9DBU5 Ltbp1-203ENSMUST00000112516 5140 ntAPPRIS P3 TSL 5 BASIC11.42□□□□□ -0.58
Rnf6Q9DBU5 Pnpla6-201ENSMUST00000004681 4438 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Rnf6Q9DBU5 Golm1-201ENSMUST00000022039 3954 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Rnf6Q9DBU5 Stat5a-202ENSMUST00000107356 3738 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Rnf6Q9DBU5 Tcf4-203ENSMUST00000114977 3070 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Rnf6Q9DBU5 Gfm2-201ENSMUST00000022170 3089 ntAPPRIS ALT2 TSL 2 BASIC11.41□□□□□ -0.58
Rnf6Q9DBU5 Slc37a4-202ENSMUST00000213268 1353 ntAPPRIS ALT1 TSL 5 BASIC11.41□□□□□ -0.58
Rnf6Q9DBU5 4933422A05Rik-201ENSMUST00000213706 1356 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Rnf6Q9DBU5 Fbp2-201ENSMUST00000021907 1354 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Rnf6Q9DBU5 Olfr1349-207ENSMUST00000216447 2448 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
Rnf6Q9DBU5 Mut-201ENSMUST00000169611 3675 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Rnf6Q9DBU5 Pcdhb2-201ENSMUST00000056522 2813 ntAPPRIS P1 BASIC11.41□□□□□ -0.58
Rnf6Q9DBU5 Pak6-201ENSMUST00000099557 4411 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Rnf6Q9DBU5 Plekhn1-204ENSMUST00000218699 3196 ntTSL 2 BASIC11.41□□□□□ -0.58
Rnf6Q9DBU5 Tfip11-201ENSMUST00000031288 3560 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Rnf6Q9DBU5 Zfp14-201ENSMUST00000077787 1506 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Rnf6Q9DBU5 Picalm-201ENSMUST00000049537 3528 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Rnf6Q9DBU5 AI854703-201ENSMUST00000095938 3517 ntAPPRIS P1 TSL 2 BASIC11.41□□□□□ -0.58
Rnf6Q9DBU5 Ankrd11-202ENSMUST00000098334 8455 ntAPPRIS P2 TSL 5 BASIC11.41□□□□□ -0.58
Rnf6Q9DBU5 Dlec1-208ENSMUST00000165231 5263 ntAPPRIS P2 TSL 5 BASIC11.41□□□□□ -0.58
Rnf6Q9DBU5 Ighg1-202ENSMUST00000194304 2482 ntAPPRIS P5 BASIC11.41□□□□□ -0.58
Rnf6Q9DBU5 Ica1-204ENSMUST00000115520 1876 ntAPPRIS P2 TSL 5 BASIC11.41□□□□□ -0.58
Rnf6Q9DBU5 4930558J22Rik-201ENSMUST00000139822 1480 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Rnf6Q9DBU5 Cit-212ENSMUST00000141101 6794 ntTSL 5 BASIC11.41□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 38.4 ms