Protein–RNA interactions for Protein: Q9D7F7

Chmp4c, Charged multivesicular body protein 4c, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp4cQ9D7F7 Fam83c-201ENSMUST00000029143 3972 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Chmp4cQ9D7F7 Tomm20-201ENSMUST00000179857 4902 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Chmp4cQ9D7F7 Mdm1-203ENSMUST00000164077 2922 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Chmp4cQ9D7F7 Patz1-207ENSMUST00000134089 1904 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Chmp4cQ9D7F7 Carmil2-203ENSMUST00000213019 4194 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Chmp4cQ9D7F7 Capzb-201ENSMUST00000030518 1390 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Chmp4cQ9D7F7 Capn15-204ENSMUST00000212149 4555 ntAPPRIS P3 TSL 5 BASIC12.72□□□□□ -0.37
Chmp4cQ9D7F7 Plekha7-207ENSMUST00000182511 4502 ntTSL 2 BASIC12.72□□□□□ -0.37
Chmp4cQ9D7F7 Gm7598-201ENSMUST00000130251 3123 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Chmp4cQ9D7F7 F730016J06Rik-201ENSMUST00000126140 1344 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Chmp4cQ9D7F7 Asz1-201ENSMUST00000010940 1736 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Chmp4cQ9D7F7 Pttg1-203ENSMUST00000101340 700 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Chmp4cQ9D7F7 Gm14314-201ENSMUST00000118225 1015 ntBASIC12.72□□□□□ -0.37
Chmp4cQ9D7F7 Pttg1-205ENSMUST00000118368 696 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Chmp4cQ9D7F7 Smim1-204ENSMUST00000130175 477 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Chmp4cQ9D7F7 Smim1-206ENSMUST00000132541 490 ntAPPRIS P1 TSL 3 BASIC12.72□□□□□ -0.37
Chmp4cQ9D7F7 Gm11815-201ENSMUST00000139423 708 ntTSL 5 BASIC12.72□□□□□ -0.37
Chmp4cQ9D7F7 6820431F20Rik-201ENSMUST00000150051 936 ntBASIC12.72□□□□□ -0.37
Chmp4cQ9D7F7 Vmn2r-ps54-203ENSMUST00000150856 1142 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Chmp4cQ9D7F7 Slc2a4rg-ps-202ENSMUST00000176590 1143 ntBASIC12.72□□□□□ -0.37
Chmp4cQ9D7F7 Gm40414-201ENSMUST00000197608 481 ntBASIC12.72□□□□□ -0.37
Chmp4cQ9D7F7 Gm44126-201ENSMUST00000204831 514 ntBASIC12.72□□□□□ -0.37
Chmp4cQ9D7F7 Gm45770-201ENSMUST00000212105 616 ntBASIC12.72□□□□□ -0.37
Chmp4cQ9D7F7 AC154680.1-201ENSMUST00000224376 859 ntBASIC12.72□□□□□ -0.37
Chmp4cQ9D7F7 AC134793.1-202ENSMUST00000227444 803 ntBASIC12.72□□□□□ -0.37
Chmp4cQ9D7F7 Tff1-201ENSMUST00000024831 478 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Chmp4cQ9D7F7 E330021D16Rik-201ENSMUST00000058713 1116 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Chmp4cQ9D7F7 Hcst-201ENSMUST00000075062 442 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Chmp4cQ9D7F7 Zfp330-201ENSMUST00000034147 1675 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Chmp4cQ9D7F7 Slc19a1-208ENSMUST00000136925 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Chmp4cQ9D7F7 Rnft1-201ENSMUST00000020827 4452 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Chmp4cQ9D7F7 Cfap74-204ENSMUST00000123952 2365 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Chmp4cQ9D7F7 Marveld2-204ENSMUST00000225754 3111 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Chmp4cQ9D7F7 AC153498.1-201ENSMUST00000219775 2722 ntBASIC12.72□□□□□ -0.37
Chmp4cQ9D7F7 Igf2bp2-202ENSMUST00000115379 3078 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Chmp4cQ9D7F7 Mgat5-201ENSMUST00000038361 8436 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Chmp4cQ9D7F7 Atg4b-201ENSMUST00000027502 4173 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Chmp4cQ9D7F7 Sap18-204ENSMUST00000128764 5125 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Chmp4cQ9D7F7 Rbfox2-203ENSMUST00000166610 6573 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Chmp4cQ9D7F7 Myo5a-206ENSMUST00000136731 6480 ntAPPRIS ALT1 TSL 5 BASIC12.71□□□□□ -0.37
Chmp4cQ9D7F7 Gm8020-201ENSMUST00000170174 1406 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
Chmp4cQ9D7F7 Adamtsl4-201ENSMUST00000015994 3856 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Chmp4cQ9D7F7 Myo9a-206ENSMUST00000136740 12252 ntAPPRIS P2 TSL 5 BASIC12.71□□□□□ -0.37
Chmp4cQ9D7F7 A130010J15Rik-205ENSMUST00000178744 3782 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.37
Chmp4cQ9D7F7 5730403I07Rik-201ENSMUST00000183878 2033 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Chmp4cQ9D7F7 Ep400-210ENSMUST00000146458 3673 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Chmp4cQ9D7F7 Ppm1f-201ENSMUST00000027373 4922 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Chmp4cQ9D7F7 Agbl4-203ENSMUST00000106587 2631 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Chmp4cQ9D7F7 Gm12337-201ENSMUST00000119634 400 ntBASIC12.71□□□□□ -0.37
Chmp4cQ9D7F7 Gm12029-201ENSMUST00000120073 832 ntBASIC12.71□□□□□ -0.37
Chmp4cQ9D7F7 Gm13791-201ENSMUST00000123263 608 ntTSL 3 BASIC12.71□□□□□ -0.37
Chmp4cQ9D7F7 1700003G13Rik-202ENSMUST00000131342 705 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Chmp4cQ9D7F7 Gm13257-201ENSMUST00000132840 665 ntTSL 3 BASIC12.71□□□□□ -0.37
Chmp4cQ9D7F7 Tsc22d1-206ENSMUST00000134109 801 ntTSL 2 BASIC12.71□□□□□ -0.37
Chmp4cQ9D7F7 Taf9-201ENSMUST00000167256 1230 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.37
Chmp4cQ9D7F7 Gm8546-201ENSMUST00000178288 1264 ntBASIC12.71□□□□□ -0.37
Chmp4cQ9D7F7 1700065I16Rik-201ENSMUST00000185277 512 ntBASIC12.71□□□□□ -0.37
Chmp4cQ9D7F7 Gm43634-201ENSMUST00000202671 675 ntTSL 3 BASIC12.71□□□□□ -0.37
Chmp4cQ9D7F7 4933402C05Rik-201ENSMUST00000208189 1035 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Chmp4cQ9D7F7 Gm15802-202ENSMUST00000209595 1094 ntTSL 5 BASIC12.71□□□□□ -0.37
Chmp4cQ9D7F7 Btg4-203ENSMUST00000213680 1282 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Chmp4cQ9D7F7 AC153891.1-201ENSMUST00000213761 742 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Chmp4cQ9D7F7 AC125486.1-201ENSMUST00000218701 320 ntBASIC12.71□□□□□ -0.37
Chmp4cQ9D7F7 C330004P14Rik-201ENSMUST00000218833 628 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Chmp4cQ9D7F7 Fth1-201ENSMUST00000025563 866 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Chmp4cQ9D7F7 Atp5h-201ENSMUST00000043931 625 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Chmp4cQ9D7F7 Tspan8-202ENSMUST00000080630 1156 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Chmp4cQ9D7F7 Gm45699-201ENSMUST00000212838 1576 ntTSL 2 BASIC12.71□□□□□ -0.37
Chmp4cQ9D7F7 Shroom2-202ENSMUST00000101141 7494 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
Chmp4cQ9D7F7 AC130823.1-201ENSMUST00000228929 1549 ntBASIC12.71□□□□□ -0.38
Chmp4cQ9D7F7 Supt3-201ENSMUST00000050630 1508 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Chmp4cQ9D7F7 Edn1-201ENSMUST00000021796 2139 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Chmp4cQ9D7F7 Gm42974-201ENSMUST00000199556 2654 ntBASIC12.71□□□□□ -0.38
Chmp4cQ9D7F7 Sf3b5-201ENSMUST00000105139 3841 ntAPPRIS P1 BASIC12.71□□□□□ -0.38
Chmp4cQ9D7F7 Ubap2-202ENSMUST00000108068 4380 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Chmp4cQ9D7F7 P4ha1-201ENSMUST00000009789 4043 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.38
Chmp4cQ9D7F7 Cutal-203ENSMUST00000113068 2278 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Chmp4cQ9D7F7 Gm17141-201ENSMUST00000167578 3148 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Chmp4cQ9D7F7 Slitrk1-201ENSMUST00000100322 5359 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
Chmp4cQ9D7F7 Osgep-202ENSMUST00000159292 3388 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Chmp4cQ9D7F7 Reep1-203ENSMUST00000212792 3339 ntTSL 5 BASIC12.7□□□□□ -0.38
Chmp4cQ9D7F7 Stat5a-201ENSMUST00000004145 3888 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Chmp4cQ9D7F7 Acadsb-202ENSMUST00000117518 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Chmp4cQ9D7F7 St5-204ENSMUST00000168005 3004 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Chmp4cQ9D7F7 Ikzf2-204ENSMUST00000188110 1365 ntTSL 5 BASIC12.7□□□□□ -0.38
Chmp4cQ9D7F7 Ikzf2-208ENSMUST00000190855 1359 ntTSL 5 BASIC12.7□□□□□ -0.38
Chmp4cQ9D7F7 Trim9-211ENSMUST00000223160 3574 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Chmp4cQ9D7F7 Slc6a20b-201ENSMUST00000026273 6307 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Chmp4cQ9D7F7 Txlng-204ENSMUST00000112316 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Chmp4cQ9D7F7 AC154352.1-201ENSMUST00000221477 2365 ntBASIC12.7□□□□□ -0.38
Chmp4cQ9D7F7 5730596B20Rik-201ENSMUST00000070587 3354 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
Chmp4cQ9D7F7 Oprm1-212ENSMUST00000105603 2053 ntTSL 5 BASIC12.7□□□□□ -0.38
Chmp4cQ9D7F7 C4b-201ENSMUST00000069507 5379 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Chmp4cQ9D7F7 Gm25766-201ENSMUST00000104101 131 ntBASIC12.7□□□□□ -0.38
Chmp4cQ9D7F7 Tomm5-201ENSMUST00000107807 442 ntTSL 2 BASIC12.7□□□□□ -0.38
Chmp4cQ9D7F7 Tomm5-202ENSMUST00000107808 679 ntTSL 2 BASIC12.7□□□□□ -0.38
Chmp4cQ9D7F7 0610010K14Rik-206ENSMUST00000108576 576 ntAPPRIS ALT1 TSL 2 BASIC12.7□□□□□ -0.38
Chmp4cQ9D7F7 Gm11952-201ENSMUST00000121172 821 ntBASIC12.7□□□□□ -0.38
Chmp4cQ9D7F7 Gm11728-201ENSMUST00000150628 660 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Chmp4cQ9D7F7 Gm25554-201ENSMUST00000158075 113 ntBASIC12.7□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 69.5 ms