Protein–RNA interactions for Protein: Q9CYB0

Trim13, E3 ubiquitin-protein ligase TRIM13, mousemouse

Predictions only

Length 407 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim13Q9CYB0 Robo4-203ENSMUST00000115048 3392 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Trim13Q9CYB0 Cops7a-202ENSMUST00000112439 1328 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Trim13Q9CYB0 Gm10787-201ENSMUST00000099552 1548 ntTSL 2 BASIC9.88□□□□□ -0.83
Trim13Q9CYB0 Serpinb6b-203ENSMUST00000164541 1719 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Trim13Q9CYB0 Gm5739-201ENSMUST00000208601 1703 ntBASIC9.88□□□□□ -0.83
Trim13Q9CYB0 Gm26527-201ENSMUST00000180416 1948 ntTSL 5 BASIC9.88□□□□□ -0.83
Trim13Q9CYB0 Gm28624-201ENSMUST00000186430 2131 ntBASIC9.88□□□□□ -0.83
Trim13Q9CYB0 Zkscan6-201ENSMUST00000018491 2302 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Trim13Q9CYB0 Galnt16-201ENSMUST00000021558 3922 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Trim13Q9CYB0 Ptk2b-202ENSMUST00000089250 3903 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Trim13Q9CYB0 Gosr2-201ENSMUST00000021329 3266 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Trim13Q9CYB0 Zc3hav1-202ENSMUST00000114898 3052 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Trim13Q9CYB0 Gm44115-201ENSMUST00000203917 2069 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Trim13Q9CYB0 Gm23200-201ENSMUST00000104379 132 ntBASIC9.88□□□□□ -0.83
Trim13Q9CYB0 Prr15l-203ENSMUST00000107633 930 ntAPPRIS P1 TSL 2 BASIC9.88□□□□□ -0.83
Trim13Q9CYB0 1700071K01Rik-201ENSMUST00000117522 819 ntBASIC9.88□□□□□ -0.83
Trim13Q9CYB0 Gm13809-201ENSMUST00000117921 597 ntBASIC9.88□□□□□ -0.83
Trim13Q9CYB0 Rab7b-205ENSMUST00000136247 497 ntTSL 5 BASIC9.88□□□□□ -0.83
Trim13Q9CYB0 Smpd4-223ENSMUST00000172182 516 ntTSL 3 BASIC9.88□□□□□ -0.83
Trim13Q9CYB0 Rpl31-202ENSMUST00000178079 487 ntAPPRIS P1 TSL 2 BASIC9.88□□□□□ -0.83
Trim13Q9CYB0 Tnnt1-213ENSMUST00000178163 934 ntAPPRIS ALT2 TSL 5 BASIC9.88□□□□□ -0.83
Trim13Q9CYB0 Nme6-206ENSMUST00000197627 905 ntTSL 3 BASIC9.88□□□□□ -0.83
Trim13Q9CYB0 Polr1d-204ENSMUST00000200993 1167 ntTSL 5 BASIC9.88□□□□□ -0.83
Trim13Q9CYB0 Gm32352-201ENSMUST00000212465 688 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Trim13Q9CYB0 Nt5dc1-206ENSMUST00000213269 802 ntTSL 5 BASIC9.88□□□□□ -0.83
Trim13Q9CYB0 Gm2517-201ENSMUST00000215651 348 ntBASIC9.88□□□□□ -0.83
Trim13Q9CYB0 Gm39460-201ENSMUST00000215728 1266 ntTSL 5 BASIC9.88□□□□□ -0.83
Trim13Q9CYB0 Csrp2-203ENSMUST00000219502 544 ntTSL 3 BASIC9.88□□□□□ -0.83
Trim13Q9CYB0 Gm7745-202ENSMUST00000222914 567 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Trim13Q9CYB0 Immp1l-201ENSMUST00000037499 955 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Trim13Q9CYB0 Olfr1395-201ENSMUST00000059379 954 ntAPPRIS P1 BASIC9.88□□□□□ -0.83
Trim13Q9CYB0 Rpl10a-ps2-201ENSMUST00000071184 642 ntBASIC9.88□□□□□ -0.83
Trim13Q9CYB0 Myh15-201ENSMUST00000168680 6340 ntAPPRIS P1 TSL 5 BASIC9.88□□□□□ -0.83
Trim13Q9CYB0 Zmynd11-206ENSMUST00000110637 3770 ntTSL 5 BASIC9.88□□□□□ -0.83
Trim13Q9CYB0 Nemp2-201ENSMUST00000165859 3396 ntAPPRIS P1 TSL 5 BASIC9.88□□□□□ -0.83
Trim13Q9CYB0 Spns3-201ENSMUST00000021154 1804 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Trim13Q9CYB0 Serpina3g-201ENSMUST00000043315 1803 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Trim13Q9CYB0 Slitrk4-202ENSMUST00000114679 3513 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Trim13Q9CYB0 Gm32200-201ENSMUST00000192778 2385 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Trim13Q9CYB0 Gm43307-201ENSMUST00000199465 2371 ntBASIC9.88□□□□□ -0.83
Trim13Q9CYB0 Smpd4-218ENSMUST00000170273 2166 ntTSL 5 BASIC9.88□□□□□ -0.83
Trim13Q9CYB0 Tanc1-203ENSMUST00000112568 7422 ntAPPRIS ALT2 TSL 5 BASIC9.88□□□□□ -0.83
Trim13Q9CYB0 Arid5b-204ENSMUST00000219238 7581 ntAPPRIS P2 TSL 1 (best) BASIC9.88□□□□□ -0.83
Trim13Q9CYB0 R3hdm2-218ENSMUST00000170336 3639 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Trim13Q9CYB0 Capn3-206ENSMUST00000110721 2898 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Trim13Q9CYB0 Fyn-205ENSMUST00000135242 2114 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Trim13Q9CYB0 Prss57-201ENSMUST00000020573 2693 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Trim13Q9CYB0 Gys1-206ENSMUST00000211150 2681 ntTSL 5 BASIC9.88□□□□□ -0.83
Trim13Q9CYB0 Muc5ac-201ENSMUST00000041924 8256 ntAPPRIS P2 TSL 5 BASIC9.87□□□□□ -0.83
Trim13Q9CYB0 Elmo3-201ENSMUST00000109375 3189 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Trim13Q9CYB0 Ccdc15-202ENSMUST00000213633 3331 ntAPPRIS ALT2 TSL 5 BASIC9.87□□□□□ -0.83
Trim13Q9CYB0 Mid1-214ENSMUST00000163810 3689 ntAPPRIS P1 TSL 5 BASIC9.87□□□□□ -0.83
Trim13Q9CYB0 Arhgap21-208ENSMUST00000141298 6339 ntAPPRIS ALT2 TSL 5 BASIC9.87□□□□□ -0.83
Trim13Q9CYB0 Ubash3a-201ENSMUST00000048656 2945 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Trim13Q9CYB0 AC079680.2-201ENSMUST00000219181 1306 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
Trim13Q9CYB0 Bcat2-208ENSMUST00000211173 1684 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
Trim13Q9CYB0 Tubgcp5-205ENSMUST00000205796 3448 ntAPPRIS ALT2 TSL 1 (best) BASIC9.87□□□□□ -0.83
Trim13Q9CYB0 Aff1-202ENSMUST00000054979 8323 ntAPPRIS ALT2 TSL 1 (best) BASIC9.87□□□□□ -0.83
Trim13Q9CYB0 Dhdh-201ENSMUST00000011526 5323 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Trim13Q9CYB0 4931423N10Rik-201ENSMUST00000028113 1842 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Trim13Q9CYB0 Gm26690-201ENSMUST00000181457 1997 ntTSL 5 BASIC9.87□□□□□ -0.83
Trim13Q9CYB0 Ctsa-201ENSMUST00000017904 3674 ntAPPRIS P4 TSL 5 BASIC9.87□□□□□ -0.83
Trim13Q9CYB0 Erc2-205ENSMUST00000210135 6233 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
Trim13Q9CYB0 Cyb5d1-202ENSMUST00000108660 1034 ntTSL 5 BASIC9.87□□□□□ -0.83
Trim13Q9CYB0 Spx-202ENSMUST00000126521 357 ntAPPRIS P2 TSL 5 BASIC9.87□□□□□ -0.83
Trim13Q9CYB0 4930589P08Rik-201ENSMUST00000129097 1084 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
Trim13Q9CYB0 Gm10714-201ENSMUST00000131346 874 ntTSL 2 BASIC9.87□□□□□ -0.83
Trim13Q9CYB0 Gm15271-201ENSMUST00000134627 2110 ntTSL 5 BASIC9.87□□□□□ -0.83
Trim13Q9CYB0 Mcfd2-205ENSMUST00000145895 751 ntTSL 2 BASIC9.87□□□□□ -0.83
Trim13Q9CYB0 Cideb-201ENSMUST00000001497 1212 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Trim13Q9CYB0 Gm15904-201ENSMUST00000154515 487 ntTSL 3 BASIC9.87□□□□□ -0.83
Trim13Q9CYB0 Man2c1-211ENSMUST00000160147 3820 ntAPPRIS P2 TSL 1 (best) BASIC9.87□□□□□ -0.83
Trim13Q9CYB0 0610040B10Rik-202ENSMUST00000162890 600 ntTSL 5 BASIC9.87□□□□□ -0.83
Trim13Q9CYB0 Gm22923-201ENSMUST00000174952 110 ntBASIC9.87□□□□□ -0.83
Trim13Q9CYB0 Gm17087-201ENSMUST00000184183 471 ntAPPRIS P1 BASIC9.87□□□□□ -0.83
Trim13Q9CYB0 Mir6927-201ENSMUST00000184494 71 ntBASIC9.87□□□□□ -0.83
Trim13Q9CYB0 Tmem108-203ENSMUST00000189066 2145 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Trim13Q9CYB0 Gm37707-201ENSMUST00000195309 325 ntTSL 3 BASIC9.87□□□□□ -0.83
Trim13Q9CYB0 Gm5865-201ENSMUST00000198713 637 ntBASIC9.87□□□□□ -0.83
Trim13Q9CYB0 AU022133-201ENSMUST00000200601 873 ntBASIC9.87□□□□□ -0.83
Trim13Q9CYB0 2900064F13Rik-201ENSMUST00000202166 1008 ntBASIC9.87□□□□□ -0.83
Trim13Q9CYB0 Gm45079-201ENSMUST00000205627 461 ntTSL 3 BASIC9.87□□□□□ -0.83
Trim13Q9CYB0 Gm9445-201ENSMUST00000207454 1285 ntBASIC9.87□□□□□ -0.83
Trim13Q9CYB0 Pigq-218ENSMUST00000208043 2987 ntAPPRIS P3 TSL 5 BASIC9.87□□□□□ -0.83
Trim13Q9CYB0 Cox6b1-204ENSMUST00000208838 354 ntTSL 3 BASIC9.87□□□□□ -0.83
Trim13Q9CYB0 3100002H09Rik-201ENSMUST00000053604 873 ntAPPRIS P1 BASIC9.87□□□□□ -0.83
Trim13Q9CYB0 Agrp-201ENSMUST00000005849 661 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Trim13Q9CYB0 Gm10652-201ENSMUST00000199790 2622 ntBASIC9.87□□□□□ -0.83
Trim13Q9CYB0 Gm7598-201ENSMUST00000130251 3123 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
Trim13Q9CYB0 Zfp532-208ENSMUST00000182852 5476 ntAPPRIS P1 TSL 5 BASIC9.87□□□□□ -0.83
Trim13Q9CYB0 Gm5403-201ENSMUST00000117105 2795 ntBASIC9.87□□□□□ -0.83
Trim13Q9CYB0 A130010J15Rik-205ENSMUST00000178744 3782 ntAPPRIS P1 TSL 2 BASIC9.87□□□□□ -0.83
Trim13Q9CYB0 Fam161a-201ENSMUST00000058269 1927 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Trim13Q9CYB0 Gm15631-201ENSMUST00000142962 2436 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
Trim13Q9CYB0 Gm15774-201ENSMUST00000141810 2176 ntTSL 5 BASIC9.87□□□□□ -0.83
Trim13Q9CYB0 4933425M03Rik-201ENSMUST00000195991 1544 ntBASIC9.87□□□□□ -0.83
Trim13Q9CYB0 Lin54-209ENSMUST00000152387 2760 ntTSL 5 BASIC9.86□□□□□ -0.83
Trim13Q9CYB0 Adamtsl4-201ENSMUST00000015994 3856 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Trim13Q9CYB0 Erc1-203ENSMUST00000183703 8760 ntAPPRIS P2 TSL 1 (best) BASIC9.86□□□□□ -0.83
Trim13Q9CYB0 Gm13126-201ENSMUST00000117079 3063 ntBASIC9.86□□□□□ -0.83
Retrieved 100 of 76,532 protein–RNA pairs in 40.8 ms