Protein–RNA interactions for Protein: Q99PJ1

Pcdh15, Protocadherin-15, mousemouse

Predictions only

Length 1,943 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh15Q99PJ1 Tmx2-202ENSMUST00000111664 1926 ntTSL 3 BASIC11.81□□□□□ -0.52
Pcdh15Q99PJ1 Creb3l4-202ENSMUST00000107369 1404 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Pcdh15Q99PJ1 Ces2a-204ENSMUST00000164182 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Pcdh15Q99PJ1 Rbm8a-203ENSMUST00000198027 2757 ntTSL 3 BASIC11.8□□□□□ -0.52
Pcdh15Q99PJ1 Gm42974-201ENSMUST00000199556 2654 ntBASIC11.8□□□□□ -0.52
Pcdh15Q99PJ1 Gm20953-201ENSMUST00000216399 2614 ntBASIC11.8□□□□□ -0.52
Pcdh15Q99PJ1 Tspan11-201ENSMUST00000032501 5188 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Pcdh15Q99PJ1 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Pcdh15Q99PJ1 Etfbkmt-202ENSMUST00000111547 1250 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Pcdh15Q99PJ1 Mrps18b-202ENSMUST00000113782 803 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Pcdh15Q99PJ1 Rnasek-203ENSMUST00000141880 465 ntTSL 2 BASIC11.8□□□□□ -0.52
Pcdh15Q99PJ1 Gm15567-201ENSMUST00000148699 2130 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Pcdh15Q99PJ1 Rspo4os-201ENSMUST00000152229 1281 ntTSL 5 BASIC11.8□□□□□ -0.52
Pcdh15Q99PJ1 Gm26619-201ENSMUST00000180396 1073 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Pcdh15Q99PJ1 Gm8391-201ENSMUST00000185632 726 ntBASIC11.8□□□□□ -0.52
Pcdh15Q99PJ1 Gm29651-201ENSMUST00000189088 697 ntBASIC11.8□□□□□ -0.52
Pcdh15Q99PJ1 4930517L18Rik-201ENSMUST00000191880 482 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Pcdh15Q99PJ1 Etv3l-201ENSMUST00000193196 325 ntBASIC11.8□□□□□ -0.52
Pcdh15Q99PJ1 Gm38941-201ENSMUST00000208606 529 ntBASIC11.8□□□□□ -0.52
Pcdh15Q99PJ1 Gm32296-201ENSMUST00000220590 1057 ntTSL 3 BASIC11.8□□□□□ -0.52
Pcdh15Q99PJ1 4933412E12Rik-201ENSMUST00000217853 1698 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Pcdh15Q99PJ1 Pacsin1-201ENSMUST00000045896 4190 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Pcdh15Q99PJ1 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Pcdh15Q99PJ1 Calcoco2-201ENSMUST00000068686 1621 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Pcdh15Q99PJ1 Hdc-201ENSMUST00000028838 2392 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Pcdh15Q99PJ1 Rsrc2-208ENSMUST00000182309 1595 ntTSL 5 BASIC11.8□□□□□ -0.52
Pcdh15Q99PJ1 Zfp410-208ENSMUST00000222258 2329 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Pcdh15Q99PJ1 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Pcdh15Q99PJ1 Entpd8-202ENSMUST00000114376 1942 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Pcdh15Q99PJ1 Prok1-202ENSMUST00000197758 3063 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Pcdh15Q99PJ1 4933425M03Rik-201ENSMUST00000195991 1544 ntBASIC11.8□□□□□ -0.52
Pcdh15Q99PJ1 Abi1-211ENSMUST00000149719 3303 ntAPPRIS ALT1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Pcdh15Q99PJ1 Lmx1b-201ENSMUST00000041730 4790 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Pcdh15Q99PJ1 Serpinf2-201ENSMUST00000043696 2192 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Pcdh15Q99PJ1 Spag16-202ENSMUST00000113940 3559 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Pcdh15Q99PJ1 Ocrl-201ENSMUST00000001202 5253 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Pcdh15Q99PJ1 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Pcdh15Q99PJ1 Snx29-203ENSMUST00000122168 2096 ntTSL 5 BASIC11.8□□□□□ -0.52
Pcdh15Q99PJ1 Dpep2-202ENSMUST00000117555 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Pcdh15Q99PJ1 D230017M19Rik-201ENSMUST00000180722 3096 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Pcdh15Q99PJ1 Tef-202ENSMUST00000109553 4401 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Pcdh15Q99PJ1 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Pcdh15Q99PJ1 BC051665-201ENSMUST00000026078 1348 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Pcdh15Q99PJ1 Hnrnpm-206ENSMUST00000148178 3934 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Pcdh15Q99PJ1 Foxred1-202ENSMUST00000127996 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Pcdh15Q99PJ1 Ss18-202ENSMUST00000040964 4153 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Pcdh15Q99PJ1 Fggy-201ENSMUST00000043335 1910 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Pcdh15Q99PJ1 Gm6880-201ENSMUST00000114125 627 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Pcdh15Q99PJ1 Gm18859-201ENSMUST00000118792 825 ntBASIC11.8□□□□□ -0.52
Pcdh15Q99PJ1 Gm15363-201ENSMUST00000118897 631 ntBASIC11.8□□□□□ -0.52
Pcdh15Q99PJ1 Pbdc1-202ENSMUST00000119477 1239 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Pcdh15Q99PJ1 Gm8606-201ENSMUST00000121482 888 ntBASIC11.8□□□□□ -0.52
Pcdh15Q99PJ1 Gm14332-201ENSMUST00000121982 899 ntBASIC11.8□□□□□ -0.52
Pcdh15Q99PJ1 Gm13631-201ENSMUST00000140978 654 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Pcdh15Q99PJ1 Ddt-201ENSMUST00000001716 649 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Pcdh15Q99PJ1 Ube2i-214ENSMUST00000174216 1144 ntTSL 2 BASIC11.8□□□□□ -0.52
Pcdh15Q99PJ1 Gm7456-201ENSMUST00000182862 1011 ntBASIC11.8□□□□□ -0.52
Pcdh15Q99PJ1 Gm37144-201ENSMUST00000195445 1150 ntBASIC11.8□□□□□ -0.52
Pcdh15Q99PJ1 Gm42915-201ENSMUST00000197478 323 ntBASIC11.8□□□□□ -0.52
Pcdh15Q99PJ1 CT030657.4-201ENSMUST00000222177 744 ntBASIC11.8□□□□□ -0.52
Pcdh15Q99PJ1 Tcstv3-202ENSMUST00000223967 779 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
Pcdh15Q99PJ1 Taf3-201ENSMUST00000026888 4792 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Pcdh15Q99PJ1 Pdik1l-201ENSMUST00000061234 4686 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Pcdh15Q99PJ1 Mmd2-201ENSMUST00000037048 3317 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Pcdh15Q99PJ1 Atp13a1-201ENSMUST00000034326 3915 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Pcdh15Q99PJ1 Tle3-202ENSMUST00000159050 2304 ntTSL 5 BASIC11.79□□□□□ -0.52
Pcdh15Q99PJ1 Tspan9-202ENSMUST00000112171 2584 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Pcdh15Q99PJ1 6030458C11Rik-201ENSMUST00000057256 3966 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Pcdh15Q99PJ1 Ksr1-207ENSMUST00000226282 5260 ntBASIC11.79□□□□□ -0.52
Pcdh15Q99PJ1 Gm38271-201ENSMUST00000192296 1603 ntBASIC11.79□□□□□ -0.52
Pcdh15Q99PJ1 Mob4-205ENSMUST00000162364 2840 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Pcdh15Q99PJ1 Ttpa-201ENSMUST00000098244 3053 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Pcdh15Q99PJ1 Scgb1b7-201ENSMUST00000108097 419 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Pcdh15Q99PJ1 Nectin3-205ENSMUST00000121245 953 ntTSL 3 BASIC11.79□□□□□ -0.52
Pcdh15Q99PJ1 Gm15777-201ENSMUST00000123463 876 ntTSL 3 BASIC11.79□□□□□ -0.52
Pcdh15Q99PJ1 Gm13465-201ENSMUST00000129687 979 ntTSL 2 BASIC11.79□□□□□ -0.52
Pcdh15Q99PJ1 Nrxn1-214ENSMUST00000173222 859 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Pcdh15Q99PJ1 Gm28167-201ENSMUST00000187644 550 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Pcdh15Q99PJ1 Gm29485-201ENSMUST00000190220 282 ntBASIC11.79□□□□□ -0.52
Pcdh15Q99PJ1 Gm18780-201ENSMUST00000209594 574 ntBASIC11.79□□□□□ -0.52
Pcdh15Q99PJ1 AC123692.1-201ENSMUST00000227514 730 ntBASIC11.79□□□□□ -0.52
Pcdh15Q99PJ1 Gm6684-201ENSMUST00000053717 685 ntBASIC11.79□□□□□ -0.52
Pcdh15Q99PJ1 Kif2a-202ENSMUST00000117423 2023 ntTSL 5 BASIC11.79□□□□□ -0.52
Pcdh15Q99PJ1 Pnma5-202ENSMUST00000114540 2287 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Pcdh15Q99PJ1 Pfkfb3-216ENSMUST00000191668 2216 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Pcdh15Q99PJ1 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Pcdh15Q99PJ1 Fam109b-203ENSMUST00000161178 2931 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Pcdh15Q99PJ1 Add2-201ENSMUST00000032069 3119 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Pcdh15Q99PJ1 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC11.79□□□□□ -0.52
Pcdh15Q99PJ1 Arap2-201ENSMUST00000076623 7306 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Pcdh15Q99PJ1 Slc2a4-201ENSMUST00000018710 2524 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Pcdh15Q99PJ1 Gm28373-201ENSMUST00000178129 2724 ntTSL 2 BASIC11.79□□□□□ -0.52
Pcdh15Q99PJ1 Slc38a5-202ENSMUST00000115590 1983 ntAPPRIS ALT2 TSL 2 BASIC11.78□□□□□ -0.52
Pcdh15Q99PJ1 Tmem8b-202ENSMUST00000107865 4775 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Pcdh15Q99PJ1 Celf3-213ENSMUST00000199775 2351 ntAPPRIS ALT1 TSL 5 BASIC11.78□□□□□ -0.52
Pcdh15Q99PJ1 Sncaip-209ENSMUST00000179625 2568 ntTSL 5 BASIC11.78□□□□□ -0.52
Pcdh15Q99PJ1 Gm12452-201ENSMUST00000117128 331 ntBASIC11.78□□□□□ -0.52
Pcdh15Q99PJ1 Gm15264-201ENSMUST00000118050 502 ntBASIC11.78□□□□□ -0.52
Pcdh15Q99PJ1 Gm12072-201ENSMUST00000118293 715 ntBASIC11.78□□□□□ -0.52
Pcdh15Q99PJ1 Gm6298-201ENSMUST00000122262 981 ntBASIC11.78□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 67.6 ms