Protein–RNA interactions for Protein: Q99PF4

Cdh23, Cadherin-23, mousemouse

Predictions only

Length 3,354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh23Q99PF4 Slc25a44-202ENSMUST00000168755 3418 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Cdh23Q99PF4 Mterf1b-201ENSMUST00000177258 1368 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Cdh23Q99PF4 AC166359.1-201ENSMUST00000220243 1871 ntBASIC10.48□□□□□ -0.73
Cdh23Q99PF4 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC10.48□□□□□ -0.73
Cdh23Q99PF4 Mypopos-202ENSMUST00000205975 2321 ntBASIC10.48□□□□□ -0.73
Cdh23Q99PF4 Sema4f-201ENSMUST00000000641 4086 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Cdh23Q99PF4 Gm12192-201ENSMUST00000120146 487 ntBASIC10.48□□□□□ -0.73
Cdh23Q99PF4 Gm17868-201ENSMUST00000192761 668 ntBASIC10.48□□□□□ -0.73
Cdh23Q99PF4 Gm23786-202ENSMUST00000200181 119 ntBASIC10.48□□□□□ -0.73
Cdh23Q99PF4 Rcvrn-201ENSMUST00000021290 1040 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Cdh23Q99PF4 AU017674-201ENSMUST00000222864 720 ntTSL 3 BASIC10.48□□□□□ -0.73
Cdh23Q99PF4 Tbata-202ENSMUST00000079235 696 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Cdh23Q99PF4 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Cdh23Q99PF4 Armc3-202ENSMUST00000114640 2818 ntAPPRIS P3 TSL 1 (best) BASIC10.48□□□□□ -0.73
Cdh23Q99PF4 Acsm2-201ENSMUST00000084647 2051 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Cdh23Q99PF4 Ccdc120-201ENSMUST00000033490 3658 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Cdh23Q99PF4 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Cdh23Q99PF4 Tspyl4-201ENSMUST00000047935 3879 ntAPPRIS P1 BASIC10.48□□□□□ -0.73
Cdh23Q99PF4 Gm13592-201ENSMUST00000118148 1010 ntBASIC10.48□□□□□ -0.73
Cdh23Q99PF4 Mir6239-201ENSMUST00000183564 105 ntBASIC10.48□□□□□ -0.73
Cdh23Q99PF4 Gm37506-201ENSMUST00000192008 143 ntBASIC10.48□□□□□ -0.73
Cdh23Q99PF4 Nps-203ENSMUST00000210907 1206 ntTSL 5 BASIC10.48□□□□□ -0.73
Cdh23Q99PF4 Olfr285-201ENSMUST00000079736 960 ntAPPRIS P1 BASIC10.48□□□□□ -0.73
Cdh23Q99PF4 Add2-201ENSMUST00000032069 3119 ntAPPRIS P3 TSL 1 (best) BASIC10.47□□□□□ -0.73
Cdh23Q99PF4 Csl-201ENSMUST00000056085 1953 ntAPPRIS P1 BASIC10.47□□□□□ -0.73
Cdh23Q99PF4 Fam45a-201ENSMUST00000025957 2307 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Cdh23Q99PF4 Gm15567-201ENSMUST00000148699 2130 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Cdh23Q99PF4 Dusp10-201ENSMUST00000048655 2792 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Cdh23Q99PF4 A630052C17Rik-201ENSMUST00000129876 2203 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Cdh23Q99PF4 Lox-201ENSMUST00000025409 3604 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Cdh23Q99PF4 9330182L06Rik-201ENSMUST00000069538 4688 ntAPPRIS P2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Cdh23Q99PF4 Ccdc141-203ENSMUST00000111833 631 ntTSL 2 BASIC10.47□□□□□ -0.73
Cdh23Q99PF4 Olfr122-201ENSMUST00000119082 993 ntBASIC10.47□□□□□ -0.73
Cdh23Q99PF4 2410141K09Rik-204ENSMUST00000173583 515 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Cdh23Q99PF4 5031425E22Rik-205ENSMUST00000191186 719 ntTSL 3 BASIC10.47□□□□□ -0.73
Cdh23Q99PF4 CT030011.1-201ENSMUST00000221959 264 ntTSL 5 BASIC10.47□□□□□ -0.73
Cdh23Q99PF4 CAAA01139602.1-201ENSMUST00000222545 283 ntBASIC10.47□□□□□ -0.73
Cdh23Q99PF4 Slc7a4-201ENSMUST00000063544 2758 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Cdh23Q99PF4 Rab11fip3-201ENSMUST00000118828 3271 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Cdh23Q99PF4 Ndst3-202ENSMUST00000124803 1917 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Cdh23Q99PF4 Tcf4-210ENSMUST00000128706 2066 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Cdh23Q99PF4 Apbb1-217ENSMUST00000191011 2712 ntAPPRIS ALT1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Cdh23Q99PF4 Mgmt-201ENSMUST00000081510 2894 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Cdh23Q99PF4 Igf2os-203ENSMUST00000141681 4778 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Cdh23Q99PF4 Fam180a-201ENSMUST00000051176 1606 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Cdh23Q99PF4 n-R5s51-201ENSMUST00000104473 123 ntBASIC10.47□□□□□ -0.73
Cdh23Q99PF4 Cox4i2-202ENSMUST00000109821 733 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Cdh23Q99PF4 Sfxn5-204ENSMUST00000113788 514 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Cdh23Q99PF4 Gm23368-201ENSMUST00000116939 96 ntBASIC10.47□□□□□ -0.73
Cdh23Q99PF4 Gm13413-201ENSMUST00000120953 602 ntBASIC10.47□□□□□ -0.73
Cdh23Q99PF4 Ly6g6e-202ENSMUST00000172494 464 ntTSL 3 BASIC10.47□□□□□ -0.73
Cdh23Q99PF4 Gm39307-201ENSMUST00000216780 1037 ntTSL 5 BASIC10.47□□□□□ -0.73
Cdh23Q99PF4 Rpl19-ps2-201ENSMUST00000219540 590 ntBASIC10.47□□□□□ -0.73
Cdh23Q99PF4 Gm10120-201ENSMUST00000219845 357 ntBASIC10.47□□□□□ -0.73
Cdh23Q99PF4 AC134439.3-201ENSMUST00000223486 851 ntTSL 5 BASIC10.47□□□□□ -0.73
Cdh23Q99PF4 AC113178.1-201ENSMUST00000227616 935 ntBASIC10.47□□□□□ -0.73
Cdh23Q99PF4 Etfrf1-201ENSMUST00000039729 2436 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Cdh23Q99PF4 Gm43817-201ENSMUST00000196459 2262 ntBASIC10.47□□□□□ -0.73
Cdh23Q99PF4 AC154729.1-201ENSMUST00000224481 1501 ntBASIC10.47□□□□□ -0.73
Cdh23Q99PF4 Pomgnt1-205ENSMUST00000121052 2693 ntAPPRIS P1 TSL 5 BASIC10.47□□□□□ -0.73
Cdh23Q99PF4 Gm45165-201ENSMUST00000207763 1631 ntBASIC10.47□□□□□ -0.73
Cdh23Q99PF4 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC10.47□□□□□ -0.73
Cdh23Q99PF4 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Cdh23Q99PF4 Morf4l2-213ENSMUST00000166478 1720 ntAPPRIS P1 TSL 2 BASIC10.47□□□□□ -0.73
Cdh23Q99PF4 Lrrcc1-202ENSMUST00000108370 3359 ntAPPRIS P3 TSL 1 (best) BASIC10.47□□□□□ -0.73
Cdh23Q99PF4 Sgcb-201ENSMUST00000081170 3786 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Cdh23Q99PF4 Mtmr7-205ENSMUST00000174205 2679 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Cdh23Q99PF4 4631405J19Rik-202ENSMUST00000111270 2909 ntTSL 2 BASIC10.46□□□□□ -0.73
Cdh23Q99PF4 Fgf2-203ENSMUST00000108120 526 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
Cdh23Q99PF4 Gm22762-201ENSMUST00000157395 137 ntBASIC10.46□□□□□ -0.73
Cdh23Q99PF4 Gm2324-201ENSMUST00000187464 662 ntBASIC10.46□□□□□ -0.73
Cdh23Q99PF4 Gm17815-201ENSMUST00000198305 895 ntBASIC10.46□□□□□ -0.73
Cdh23Q99PF4 Gm44155-201ENSMUST00000203923 412 ntBASIC10.46□□□□□ -0.73
Cdh23Q99PF4 Apoc1-204ENSMUST00000207978 339 ntTSL 3 BASIC10.46□□□□□ -0.73
Cdh23Q99PF4 Gm5951-201ENSMUST00000220283 504 ntBASIC10.46□□□□□ -0.73
Cdh23Q99PF4 Hesx1-201ENSMUST00000035433 1141 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Cdh23Q99PF4 Gm6460-201ENSMUST00000088616 1168 ntAPPRIS ALT2 TSL 1 (best) BASIC10.46□□□□□ -0.73
Cdh23Q99PF4 Fgf2-202ENSMUST00000091203 535 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
Cdh23Q99PF4 Tacc2-217ENSMUST00000209108 3310 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
Cdh23Q99PF4 Lpar1-205ENSMUST00000107575 3421 ntAPPRIS P3 TSL 1 (best) BASIC10.46□□□□□ -0.73
Cdh23Q99PF4 Pacsin1-201ENSMUST00000045896 4190 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Cdh23Q99PF4 Olfr533-202ENSMUST00000211093 2397 ntAPPRIS P1 TSL 3 BASIC10.46□□□□□ -0.73
Cdh23Q99PF4 Pmaip1-201ENSMUST00000025399 2646 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Cdh23Q99PF4 Jak3-203ENSMUST00000110013 4009 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Cdh23Q99PF4 AC154220.1-201ENSMUST00000225033 1705 ntBASIC10.46□□□□□ -0.73
Cdh23Q99PF4 Igsf6-201ENSMUST00000047194 2175 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Cdh23Q99PF4 Gm14147-202ENSMUST00000178211 1923 ntAPPRIS P1 TSL 5 BASIC10.46□□□□□ -0.73
Cdh23Q99PF4 Ube2q1-202ENSMUST00000196726 1650 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
Cdh23Q99PF4 Prkd2-202ENSMUST00000168093 3251 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Cdh23Q99PF4 Nkd1-202ENSMUST00000169179 4081 ntTSL 2 BASIC10.46□□□□□ -0.73
Cdh23Q99PF4 CT025603.2-201ENSMUST00000224369 484 ntBASIC10.46□□□□□ -0.73
Cdh23Q99PF4 Plekhn1-204ENSMUST00000218699 3196 ntTSL 2 BASIC10.46□□□□□ -0.73
Cdh23Q99PF4 AC159819.3-201ENSMUST00000216940 1837 ntBASIC10.46□□□□□ -0.74
Cdh23Q99PF4 Chrm5-201ENSMUST00000099589 1599 ntAPPRIS P1 BASIC10.46□□□□□ -0.74
Cdh23Q99PF4 Babam2-202ENSMUST00000071531 1308 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
Cdh23Q99PF4 Creb3l4-202ENSMUST00000107369 1404 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Cdh23Q99PF4 Hsd17b6-202ENSMUST00000219183 1522 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Cdh23Q99PF4 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Cdh23Q99PF4 Ptk2-209ENSMUST00000226988 4444 ntAPPRIS ALT1 BASIC10.46□□□□□ -0.74
Cdh23Q99PF4 1700057H15Rik-202ENSMUST00000143859 704 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
Retrieved 100 of 76,532 protein–RNA pairs in 69.9 ms