Protein–RNA interactions for Protein: Q99K46

Usp11, Ubiquitin carboxyl-terminal hydrolase 11, mousemouse

Predictions only

Length 921 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp11Q99K46 Ido1-202ENSMUST00000110667 1656 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Usp11Q99K46 4921507G05Rik-201ENSMUST00000181348 1653 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Usp11Q99K46 Axin2-202ENSMUST00000106711 2551 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
Usp11Q99K46 Tcp10a-203ENSMUST00000129709 1778 ntAPPRIS P2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Usp11Q99K46 Znrf1-202ENSMUST00000166859 3650 ntTSL 5 BASIC11.23□□□□□ -0.61
Usp11Q99K46 Zc3h18-202ENSMUST00000093073 3705 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Usp11Q99K46 Fcamr-202ENSMUST00000112477 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Usp11Q99K46 Wdr37-212ENSMUST00000176922 3780 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Usp11Q99K46 AC158779.1-201ENSMUST00000228912 3861 ntBASIC11.23□□□□□ -0.61
Usp11Q99K46 Gm1110-201ENSMUST00000115261 1996 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
Usp11Q99K46 St3gal6-207ENSMUST00000137035 4123 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Usp11Q99K46 Tro-201ENSMUST00000087253 3224 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Usp11Q99K46 Olfr601-203ENSMUST00000214110 2196 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
Usp11Q99K46 Olfr601-204ENSMUST00000217416 2195 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
Usp11Q99K46 Ampd2-203ENSMUST00000102638 3650 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
Usp11Q99K46 Nrf1-208ENSMUST00000115208 2492 ntTSL 5 BASIC11.23□□□□□ -0.61
Usp11Q99K46 Cln3-204ENSMUST00000116269 2487 ntAPPRIS P2 TSL 5 BASIC11.23□□□□□ -0.61
Usp11Q99K46 Col4a4-201ENSMUST00000087050 10108 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Usp11Q99K46 Gm12705-201ENSMUST00000129460 872 ntTSL 2 BASIC11.23□□□□□ -0.61
Usp11Q99K46 Gm11728-201ENSMUST00000150628 660 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Usp11Q99K46 Gm23153-201ENSMUST00000175323 313 ntBASIC11.23□□□□□ -0.61
Usp11Q99K46 Higd1c-201ENSMUST00000175683 507 ntAPPRIS P1 TSL 3 BASIC11.23□□□□□ -0.61
Usp11Q99K46 Gm29292-201ENSMUST00000186169 766 ntTSL 3 BASIC11.23□□□□□ -0.61
Usp11Q99K46 Gm29410-201ENSMUST00000188383 694 ntBASIC11.23□□□□□ -0.61
Usp11Q99K46 Gm38139-201ENSMUST00000195806 704 ntTSL 2 BASIC11.23□□□□□ -0.61
Usp11Q99K46 Gm45219-201ENSMUST00000205602 465 ntBASIC11.23□□□□□ -0.61
Usp11Q99K46 4933402C05Rik-201ENSMUST00000208189 1035 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Usp11Q99K46 Gm10752-201ENSMUST00000218348 729 ntBASIC11.23□□□□□ -0.61
Usp11Q99K46 Olfr335-ps-201ENSMUST00000223545 939 ntAPPRIS P1 BASIC11.23□□□□□ -0.61
Usp11Q99K46 CT010486.3-201ENSMUST00000224555 811 ntBASIC11.23□□□□□ -0.61
Usp11Q99K46 Smco2-201ENSMUST00000032433 1276 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Usp11Q99K46 Gm25580-201ENSMUST00000083409 327 ntBASIC11.23□□□□□ -0.61
Usp11Q99K46 Pax5-205ENSMUST00000107827 1315 ntTSL 5 BASIC11.23□□□□□ -0.61
Usp11Q99K46 Ikzf2-204ENSMUST00000188110 1365 ntTSL 5 BASIC11.23□□□□□ -0.61
Usp11Q99K46 Ikzf2-208ENSMUST00000190855 1359 ntTSL 5 BASIC11.23□□□□□ -0.61
Usp11Q99K46 Nudt7-203ENSMUST00000109109 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Usp11Q99K46 Dab2-203ENSMUST00000110663 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Usp11Q99K46 Adat1-201ENSMUST00000034427 3159 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Usp11Q99K46 Epb41-202ENSMUST00000054917 4948 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
Usp11Q99K46 Copz1-201ENSMUST00000100162 1669 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Usp11Q99K46 Olfr707-205ENSMUST00000214112 1735 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
Usp11Q99K46 Unc45a-202ENSMUST00000107368 3635 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
Usp11Q99K46 Ikbkg-204ENSMUST00000114128 1867 ntAPPRIS ALT2 TSL 2 BASIC11.23□□□□□ -0.61
Usp11Q99K46 Zeb2-203ENSMUST00000076836 3913 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
Usp11Q99K46 Cutal-203ENSMUST00000113068 2278 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Usp11Q99K46 Tns3-201ENSMUST00000020695 7483 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
Usp11Q99K46 Gm10827-201ENSMUST00000181897 2586 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Usp11Q99K46 Idua-203ENSMUST00000119212 3022 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Usp11Q99K46 Kcng4-201ENSMUST00000061828 3806 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Usp11Q99K46 Ltc4s-201ENSMUST00000101265 480 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Usp11Q99K46 Oprl1-204ENSMUST00000108767 1248 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
Usp11Q99K46 Gm14592-201ENSMUST00000117201 560 ntBASIC11.22□□□□□ -0.61
Usp11Q99K46 Gm14270-201ENSMUST00000118388 846 ntBASIC11.22□□□□□ -0.61
Usp11Q99K46 Ccdc167-203ENSMUST00000129091 2256 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Usp11Q99K46 Snhg17-205ENSMUST00000151331 529 ntTSL 2 BASIC11.22□□□□□ -0.61
Usp11Q99K46 Mrgpra2a-201ENSMUST00000159004 1240 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Usp11Q99K46 Clp1-203ENSMUST00000165219 2564 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Usp11Q99K46 Osbpl7-206ENSMUST00000168565 3535 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
Usp11Q99K46 Gm3233-201ENSMUST00000168997 693 ntAPPRIS P1 BASIC11.22□□□□□ -0.61
Usp11Q99K46 Gm28727-201ENSMUST00000176549 443 ntTSL 3 BASIC11.22□□□□□ -0.61
Usp11Q99K46 Dpf3-206ENSMUST00000177959 1298 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Usp11Q99K46 Sbsn-205ENSMUST00000182721 677 ntAPPRIS ALT2 TSL 3 BASIC11.22□□□□□ -0.61
Usp11Q99K46 Gm27438-201ENSMUST00000183480 110 ntBASIC11.22□□□□□ -0.61
Usp11Q99K46 Gm43692-201ENSMUST00000198236 1062 ntBASIC11.22□□□□□ -0.61
Usp11Q99K46 Gm3372-201ENSMUST00000198806 1792 ntBASIC11.22□□□□□ -0.61
Usp11Q99K46 Gm5302-201ENSMUST00000202130 796 ntBASIC11.22□□□□□ -0.61
Usp11Q99K46 C530044C16Rik-201ENSMUST00000204275 1624 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Usp11Q99K46 Gm31401-201ENSMUST00000207352 734 ntTSL 3 BASIC11.22□□□□□ -0.61
Usp11Q99K46 Fos-201ENSMUST00000021674 2108 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Usp11Q99K46 Slc10a1-202ENSMUST00000218162 1749 ntAPPRIS P2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Usp11Q99K46 1700011B04Rik-204ENSMUST00000220859 422 ntTSL 5 BASIC11.22□□□□□ -0.61
Usp11Q99K46 AC129975.1-201ENSMUST00000224816 592 ntBASIC11.22□□□□□ -0.61
Usp11Q99K46 Scg5-201ENSMUST00000024005 1208 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Usp11Q99K46 Abhd4-201ENSMUST00000041197 2401 ntAPPRIS P4 TSL 1 (best) BASIC11.22□□□□□ -0.61
Usp11Q99K46 Trim17-201ENSMUST00000047697 3664 ntTSL 2 BASIC11.22□□□□□ -0.61
Usp11Q99K46 Fam212a-201ENSMUST00000048568 1025 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Usp11Q99K46 Hmgb2-201ENSMUST00000067925 2628 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Usp11Q99K46 Zfp869-201ENSMUST00000080987 1590 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
Usp11Q99K46 Clec4a3-201ENSMUST00000088468 1300 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Usp11Q99K46 Hist1h2bl-201ENSMUST00000091756 381 ntAPPRIS P1 BASIC11.22□□□□□ -0.61
Usp11Q99K46 Gm5532-201ENSMUST00000097531 1751 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Usp11Q99K46 Eif2s2-201ENSMUST00000099173 2542 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Usp11Q99K46 Rbbp6-202ENSMUST00000071590 5728 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
Usp11Q99K46 Riok3-201ENSMUST00000025270 3661 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Usp11Q99K46 Anks1b-216ENSMUST00000182430 3305 ntTSL 5 BASIC11.22□□□□□ -0.61
Usp11Q99K46 Tor4a-201ENSMUST00000081869 3255 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Usp11Q99K46 Epb41-204ENSMUST00000105970 5059 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
Usp11Q99K46 Reps1-210ENSMUST00000164556 2537 ntAPPRIS ALT1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Usp11Q99K46 AC122382.1-201ENSMUST00000225869 2371 ntBASIC11.21□□□□□ -0.61
Usp11Q99K46 Tmc3-201ENSMUST00000039317 6221 ntAPPRIS P2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Usp11Q99K46 Cdc23-203ENSMUST00000133181 4133 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Usp11Q99K46 Dync1h1-201ENSMUST00000018851 14342 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Usp11Q99K46 Dnajc10-201ENSMUST00000028392 4042 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Usp11Q99K46 Epc1-201ENSMUST00000028100 3965 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Usp11Q99K46 Tcn2-206ENSMUST00000109992 1945 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.61
Usp11Q99K46 Olfr1113-202ENSMUST00000215611 1949 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.61
Usp11Q99K46 Olfr239-202ENSMUST00000213731 3690 ntTSL 5 BASIC11.21□□□□□ -0.61
Usp11Q99K46 5530401A14Rik-201ENSMUST00000021044 1836 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Usp11Q99K46 Mical1-201ENSMUST00000019967 3563 ntAPPRIS P2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Usp11Q99K46 Ezr-201ENSMUST00000064234 3164 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 68.8 ms