Protein–RNA interactions for Protein: Q91VD8

Pcdhb17, MCG141290, mousemouse

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb17Q91VD8 Gm15513-201ENSMUST00000140646 1569 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Pcdhb17Q91VD8 Grik3-201ENSMUST00000030676 8973 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Pcdhb17Q91VD8 Cplx3-201ENSMUST00000045068 2859 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Pcdhb17Q91VD8 Ajuba-201ENSMUST00000054487 3397 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Pcdhb17Q91VD8 Cacna1c-212ENSMUST00000187940 7507 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Pcdhb17Q91VD8 Cc2d1a-202ENSMUST00000117424 3262 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Pcdhb17Q91VD8 Nxph1-202ENSMUST00000160300 2815 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Pcdhb17Q91VD8 Gja5-203ENSMUST00000199597 3668 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Pcdhb17Q91VD8 Cyp4b1-201ENSMUST00000102707 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Pcdhb17Q91VD8 Cyp4f40-201ENSMUST00000165061 1858 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Pcdhb17Q91VD8 Jph2-202ENSMUST00000109425 4155 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Pcdhb17Q91VD8 Ankzf1-208ENSMUST00000152233 2739 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Pcdhb17Q91VD8 Spata17-202ENSMUST00000110945 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Pcdhb17Q91VD8 Clps-202ENSMUST00000114785 369 ntTSL 2 BASIC12.09□□□□□ -0.47
Pcdhb17Q91VD8 Olfr1332-ps1-201ENSMUST00000119243 960 ntBASIC12.09□□□□□ -0.47
Pcdhb17Q91VD8 Treml4-202ENSMUST00000125426 992 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Pcdhb17Q91VD8 4930471C06Rik-202ENSMUST00000143070 579 ntTSL 3 BASIC12.09□□□□□ -0.47
Pcdhb17Q91VD8 Gm8459-201ENSMUST00000162504 760 ntBASIC12.09□□□□□ -0.47
Pcdhb17Q91VD8 Slpi-202ENSMUST00000165980 488 ntAPPRIS ALT2 TSL 3 BASIC12.09□□□□□ -0.47
Pcdhb17Q91VD8 Gm8676-201ENSMUST00000184206 637 ntBASIC12.09□□□□□ -0.47
Pcdhb17Q91VD8 Gm27153-201ENSMUST00000184492 407 ntTSL 2 BASIC12.09□□□□□ -0.47
Pcdhb17Q91VD8 Gm19353-201ENSMUST00000184561 445 ntBASIC12.09□□□□□ -0.47
Pcdhb17Q91VD8 Gm28375-201ENSMUST00000185304 430 ntTSL 3 BASIC12.09□□□□□ -0.47
Pcdhb17Q91VD8 Gm28881-201ENSMUST00000187710 470 ntTSL 3 BASIC12.09□□□□□ -0.47
Pcdhb17Q91VD8 Gm29264-201ENSMUST00000191240 1264 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Pcdhb17Q91VD8 Gm37294-201ENSMUST00000193461 494 ntTSL 3 BASIC12.09□□□□□ -0.47
Pcdhb17Q91VD8 4930558C23Rik-201ENSMUST00000196239 731 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Pcdhb17Q91VD8 Igkv12-49-201ENSMUST00000197714 278 ntBASIC12.09□□□□□ -0.47
Pcdhb17Q91VD8 Gm30275-202ENSMUST00000198124 416 ntTSL 3 BASIC12.09□□□□□ -0.47
Pcdhb17Q91VD8 Rbakdn-201ENSMUST00000198334 520 ntTSL 2 BASIC12.09□□□□□ -0.47
Pcdhb17Q91VD8 Znhit6-206ENSMUST00000199033 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Pcdhb17Q91VD8 Gm44253-201ENSMUST00000203387 628 ntBASIC12.09□□□□□ -0.47
Pcdhb17Q91VD8 Gm44118-201ENSMUST00000204665 229 ntBASIC12.09□□□□□ -0.47
Pcdhb17Q91VD8 Olfr187-201ENSMUST00000206428 978 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
Pcdhb17Q91VD8 Olfr1086-202ENSMUST00000213198 1153 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Pcdhb17Q91VD8 Olfr950-ps1-201ENSMUST00000213804 878 ntBASIC12.09□□□□□ -0.47
Pcdhb17Q91VD8 AC132237.3-201ENSMUST00000220867 549 ntTSL 2 BASIC12.09□□□□□ -0.47
Pcdhb17Q91VD8 Psors1c2-201ENSMUST00000025273 843 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Pcdhb17Q91VD8 Psmg2-201ENSMUST00000025418 1059 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Pcdhb17Q91VD8 4930519F16Rik-201ENSMUST00000033688 1113 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Pcdhb17Q91VD8 Dppa3-201ENSMUST00000049644 833 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Pcdhb17Q91VD8 1700024P04Rik-201ENSMUST00000054425 481 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
Pcdhb17Q91VD8 Gm9788-201ENSMUST00000057038 906 ntBASIC12.09□□□□□ -0.47
Pcdhb17Q91VD8 Rpp38-201ENSMUST00000062672 1042 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Pcdhb17Q91VD8 BC048507-201ENSMUST00000078471 600 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
Pcdhb17Q91VD8 Gm5965-201ENSMUST00000009191 588 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Pcdhb17Q91VD8 Cyp27b1-201ENSMUST00000165764 2380 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Pcdhb17Q91VD8 Cmklr1-201ENSMUST00000047936 2882 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Pcdhb17Q91VD8 Fcrl1-203ENSMUST00000167200 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Pcdhb17Q91VD8 Gm13264-201ENSMUST00000138416 2011 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Pcdhb17Q91VD8 Lrp2-203ENSMUST00000100051 4359 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Pcdhb17Q91VD8 Rnf183-203ENSMUST00000107455 1432 ntAPPRIS P1 TSL 3 BASIC12.09□□□□□ -0.47
Pcdhb17Q91VD8 4933412E12Rik-201ENSMUST00000217853 1698 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Pcdhb17Q91VD8 Serpinb3b-201ENSMUST00000086694 1653 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Pcdhb17Q91VD8 Ctsd-201ENSMUST00000066401 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Pcdhb17Q91VD8 Rpl15-202ENSMUST00000080281 1922 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Pcdhb17Q91VD8 Cul9-204ENSMUST00000182485 7848 ntAPPRIS P2 TSL 5 BASIC12.09□□□□□ -0.47
Pcdhb17Q91VD8 Lhx6-201ENSMUST00000112960 3345 ntAPPRIS P1 TSL 2 BASIC12.09□□□□□ -0.47
Pcdhb17Q91VD8 9330111N05Rik-203ENSMUST00000181508 1848 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Pcdhb17Q91VD8 Prkcsh-202ENSMUST00000115331 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Pcdhb17Q91VD8 Arfgap1-202ENSMUST00000108859 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.47
Pcdhb17Q91VD8 Spert-204ENSMUST00000169658 1474 ntAPPRIS ALT2 TSL 3 BASIC12.08□□□□□ -0.47
Pcdhb17Q91VD8 Capn3-205ENSMUST00000110719 2778 ntTSL 5 BASIC12.08□□□□□ -0.48
Pcdhb17Q91VD8 Ppp2r1b-202ENSMUST00000114437 3430 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Pcdhb17Q91VD8 Fam227a-202ENSMUST00000109646 1896 ntTSL 5 BASIC12.08□□□□□ -0.48
Pcdhb17Q91VD8 Zc3h12d-201ENSMUST00000039484 4092 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Pcdhb17Q91VD8 Fank1-201ENSMUST00000065359 2004 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Pcdhb17Q91VD8 Acp5-203ENSMUST00000165735 1376 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Pcdhb17Q91VD8 Ism2-201ENSMUST00000051601 1350 ntTSL 5 BASIC12.08□□□□□ -0.48
Pcdhb17Q91VD8 Glmn-203ENSMUST00000100949 1759 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Pcdhb17Q91VD8 Dph2-201ENSMUST00000030265 2555 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Pcdhb17Q91VD8 Eno1-201ENSMUST00000080149 1902 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Pcdhb17Q91VD8 Tbc1d2-201ENSMUST00000084621 4315 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Pcdhb17Q91VD8 Me3-202ENSMUST00000032856 4485 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Pcdhb17Q91VD8 Ccdc163-202ENSMUST00000106462 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Pcdhb17Q91VD8 Gsg1-202ENSMUST00000111909 1087 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Pcdhb17Q91VD8 Gm22711-201ENSMUST00000116890 133 ntBASIC12.08□□□□□ -0.48
Pcdhb17Q91VD8 Gm14836-201ENSMUST00000118567 471 ntBASIC12.08□□□□□ -0.48
Pcdhb17Q91VD8 Gm12158-201ENSMUST00000130493 631 ntTSL 3 BASIC12.08□□□□□ -0.48
Pcdhb17Q91VD8 Gm11753-201ENSMUST00000151091 396 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Pcdhb17Q91VD8 Ear-ps10-201ENSMUST00000161871 460 ntBASIC12.08□□□□□ -0.48
Pcdhb17Q91VD8 Vmn2r-ps41-201ENSMUST00000173587 980 ntBASIC12.08□□□□□ -0.48
Pcdhb17Q91VD8 Ager-207ENSMUST00000173992 1248 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Pcdhb17Q91VD8 Atpaf1-202ENSMUST00000175725 996 ntTSL 5 BASIC12.08□□□□□ -0.48
Pcdhb17Q91VD8 Vmn1r25-201ENSMUST00000176572 1101 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
Pcdhb17Q91VD8 Gm20738-201ENSMUST00000177666 1225 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Pcdhb17Q91VD8 Gm7481-201ENSMUST00000182020 995 ntBASIC12.08□□□□□ -0.48
Pcdhb17Q91VD8 Gm8614-201ENSMUST00000182528 978 ntBASIC12.08□□□□□ -0.48
Pcdhb17Q91VD8 Gm8669-201ENSMUST00000183839 945 ntBASIC12.08□□□□□ -0.48
Pcdhb17Q91VD8 Gm20816-202ENSMUST00000187846 1225 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Pcdhb17Q91VD8 Tmem242-203ENSMUST00000188282 822 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Pcdhb17Q91VD8 Gm37950-201ENSMUST00000191616 364 ntTSL 3 BASIC12.08□□□□□ -0.48
Pcdhb17Q91VD8 Gm37695-201ENSMUST00000191765 530 ntTSL 5 BASIC12.08□□□□□ -0.48
Pcdhb17Q91VD8 Gm34767-201ENSMUST00000191813 1062 ntBASIC12.08□□□□□ -0.48
Pcdhb17Q91VD8 Gm37246-201ENSMUST00000192665 835 ntBASIC12.08□□□□□ -0.48
Pcdhb17Q91VD8 Gm37679-201ENSMUST00000192868 1192 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Pcdhb17Q91VD8 Gm9555-201ENSMUST00000200908 583 ntBASIC12.08□□□□□ -0.48
Pcdhb17Q91VD8 Gm19161-201ENSMUST00000217958 737 ntBASIC12.08□□□□□ -0.48
Pcdhb17Q91VD8 4930423D24Rik-202ENSMUST00000219785 554 ntTSL 5 BASIC12.08□□□□□ -0.48
Pcdhb17Q91VD8 Rps12-208ENSMUST00000220070 494 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 35.5 ms