Protein–RNA interactions for Protein: Q8C8B0

Alx1, ALX homeobox protein 1, mousemouse

Predictions only

Length 326 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alx1Q8C8B0 Gm44511-201ENSMUST00000204394 678 ntAPPRIS P5 TSL 1 (best) BASIC12.42□□□□□ -0.42
Alx1Q8C8B0 Gm44511-202ENSMUST00000204423 678 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Alx1Q8C8B0 Gm6855-201ENSMUST00000206307 790 ntBASIC12.42□□□□□ -0.42
Alx1Q8C8B0 Gm45085-201ENSMUST00000209100 441 ntBASIC12.42□□□□□ -0.42
Alx1Q8C8B0 Gm45308-201ENSMUST00000210610 415 ntBASIC12.42□□□□□ -0.42
Alx1Q8C8B0 BC106175-201ENSMUST00000218578 695 ntTSL 5 BASIC12.42□□□□□ -0.42
Alx1Q8C8B0 Gpr137b-ps-202ENSMUST00000220647 1159 ntBASIC12.42□□□□□ -0.42
Alx1Q8C8B0 AC137950.2-201ENSMUST00000227127 1089 ntBASIC12.42□□□□□ -0.42
Alx1Q8C8B0 1700047G03Rik-205ENSMUST00000227822 1048 ntBASIC12.42□□□□□ -0.42
Alx1Q8C8B0 Rps6ka6-204ENSMUST00000113428 4135 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Alx1Q8C8B0 Cul9-204ENSMUST00000182485 7848 ntAPPRIS P2 TSL 5 BASIC12.42□□□□□ -0.42
Alx1Q8C8B0 Brd1-202ENSMUST00000109380 3259 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Alx1Q8C8B0 Gm10646-201ENSMUST00000213227 3293 ntTSL 2 BASIC12.42□□□□□ -0.42
Alx1Q8C8B0 E330011O21Rik-202ENSMUST00000209498 1403 ntTSL 5 BASIC12.42□□□□□ -0.42
Alx1Q8C8B0 Cpvl-201ENSMUST00000166545 1597 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Alx1Q8C8B0 Gm29773-201ENSMUST00000212751 1895 ntTSL 2 BASIC12.42□□□□□ -0.42
Alx1Q8C8B0 Nmrk2-201ENSMUST00000005069 1854 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Alx1Q8C8B0 Grhl1-202ENSMUST00000085553 3469 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Alx1Q8C8B0 Cyp7b1-201ENSMUST00000035625 2166 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Alx1Q8C8B0 Ankrd31-203ENSMUST00000208758 5859 ntTSL 5 BASIC12.42□□□□□ -0.42
Alx1Q8C8B0 H2-T3-204ENSMUST00000102675 2312 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Alx1Q8C8B0 4930594M22Rik-202ENSMUST00000161599 3595 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Alx1Q8C8B0 Gnas-203ENSMUST00000087876 3719 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Alx1Q8C8B0 Scmh1-203ENSMUST00000106298 1995 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Alx1Q8C8B0 Robo4-201ENSMUST00000102895 3226 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Alx1Q8C8B0 Urod-201ENSMUST00000030446 1489 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Alx1Q8C8B0 Bpifb4-201ENSMUST00000099181 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Alx1Q8C8B0 Ssh1-201ENSMUST00000077689 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Alx1Q8C8B0 Gm42706-201ENSMUST00000199733 1910 ntBASIC12.41□□□□□ -0.42
Alx1Q8C8B0 Tceanc-202ENSMUST00000112188 4050 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Alx1Q8C8B0 Cdc7-204ENSMUST00000118261 3129 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Alx1Q8C8B0 Pxmp4-202ENSMUST00000109703 560 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Alx1Q8C8B0 Ncbp2-202ENSMUST00000115178 515 ntTSL 5 BASIC12.41□□□□□ -0.42
Alx1Q8C8B0 Gm11235-201ENSMUST00000117763 333 ntBASIC12.41□□□□□ -0.42
Alx1Q8C8B0 Gm16459-201ENSMUST00000121443 686 ntBASIC12.41□□□□□ -0.42
Alx1Q8C8B0 1700001J04Rik-202ENSMUST00000154037 743 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Alx1Q8C8B0 Mut-201ENSMUST00000169611 3675 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Alx1Q8C8B0 Gm4862-201ENSMUST00000170405 438 ntBASIC12.41□□□□□ -0.42
Alx1Q8C8B0 Gm27211-201ENSMUST00000183507 631 ntTSL 5 BASIC12.41□□□□□ -0.42
Alx1Q8C8B0 Gm27833-201ENSMUST00000184285 124 ntBASIC12.41□□□□□ -0.42
Alx1Q8C8B0 Gm27953-201ENSMUST00000185171 143 ntBASIC12.41□□□□□ -0.42
Alx1Q8C8B0 Gm28901-201ENSMUST00000188810 474 ntTSL 5 BASIC12.41□□□□□ -0.42
Alx1Q8C8B0 Gm42433-201ENSMUST00000196806 940 ntBASIC12.41□□□□□ -0.42
Alx1Q8C8B0 Gm3527-201ENSMUST00000198905 460 ntBASIC12.41□□□□□ -0.42
Alx1Q8C8B0 Gm7939-201ENSMUST00000201233 1050 ntBASIC12.41□□□□□ -0.42
Alx1Q8C8B0 BC080696-201ENSMUST00000202858 1218 ntBASIC12.41□□□□□ -0.42
Alx1Q8C8B0 Gm18596-201ENSMUST00000218133 843 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Alx1Q8C8B0 Gm8557-201ENSMUST00000220777 475 ntBASIC12.41□□□□□ -0.42
Alx1Q8C8B0 Gm8016-201ENSMUST00000221830 1575 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Alx1Q8C8B0 Tbata-202ENSMUST00000079235 696 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Alx1Q8C8B0 Rpl3-201ENSMUST00000081650 1293 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Alx1Q8C8B0 Gimap8-202ENSMUST00000203083 2579 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Alx1Q8C8B0 Olfr742-202ENSMUST00000213935 2117 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Alx1Q8C8B0 Plxnb2-201ENSMUST00000060808 6394 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Alx1Q8C8B0 1700017B05Rik-201ENSMUST00000034846 4152 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Alx1Q8C8B0 Ambra1-203ENSMUST00000099712 5021 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Alx1Q8C8B0 Itgb2-201ENSMUST00000000299 2970 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Alx1Q8C8B0 Nap1l3-201ENSMUST00000079490 2837 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Alx1Q8C8B0 Gm42970-201ENSMUST00000196407 1352 ntBASIC12.41□□□□□ -0.42
Alx1Q8C8B0 Gm32200-201ENSMUST00000192778 2385 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Alx1Q8C8B0 Smtn-210ENSMUST00000170588 3386 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Alx1Q8C8B0 Magt1-204ENSMUST00000151689 4531 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Alx1Q8C8B0 Smarca5-ps-201ENSMUST00000121843 3123 ntBASIC12.4□□□□□ -0.42
Alx1Q8C8B0 Slc38a5-201ENSMUST00000033512 1868 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Alx1Q8C8B0 Ttbk2-203ENSMUST00000085840 11152 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Alx1Q8C8B0 Smpd4-219ENSMUST00000170366 2256 ntTSL 5 BASIC12.4□□□□□ -0.42
Alx1Q8C8B0 Wbp1l-201ENSMUST00000099376 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Alx1Q8C8B0 Cacna1c-227ENSMUST00000220022 7765 ntTSL 5 BASIC12.4□□□□□ -0.42
Alx1Q8C8B0 St6galnac5-201ENSMUST00000044278 5667 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Alx1Q8C8B0 Asb3-202ENSMUST00000117883 2509 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Alx1Q8C8B0 Zfp386-201ENSMUST00000073551 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Alx1Q8C8B0 Zfp809-201ENSMUST00000072465 1425 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Alx1Q8C8B0 Stau2-216ENSMUST00000162627 2773 ntTSL 5 BASIC12.4□□□□□ -0.42
Alx1Q8C8B0 Gm8378-202ENSMUST00000167777 2624 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Alx1Q8C8B0 Mrrf-201ENSMUST00000028250 2623 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Alx1Q8C8B0 Tesk2-201ENSMUST00000045542 3033 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Alx1Q8C8B0 Trub2-201ENSMUST00000048044 3408 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Alx1Q8C8B0 Hmgn2-201ENSMUST00000100472 881 ntAPPRIS ALT1 TSL 2 BASIC12.4□□□□□ -0.42
Alx1Q8C8B0 Ube2d-ps-201ENSMUST00000121354 441 ntBASIC12.4□□□□□ -0.42
Alx1Q8C8B0 Gm13558-201ENSMUST00000140464 554 ntTSL 2 BASIC12.4□□□□□ -0.42
Alx1Q8C8B0 Gm23081-201ENSMUST00000157845 297 ntBASIC12.4□□□□□ -0.42
Alx1Q8C8B0 Erg-209ENSMUST00000177450 1280 ntTSL 5 BASIC12.4□□□□□ -0.42
Alx1Q8C8B0 Gm3115-202ENSMUST00000177660 618 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Alx1Q8C8B0 Gm6337-203ENSMUST00000177662 618 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Alx1Q8C8B0 Gm25872-201ENSMUST00000177784 100 ntBASIC12.4□□□□□ -0.42
Alx1Q8C8B0 Gm3727-202ENSMUST00000178251 618 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Alx1Q8C8B0 Gm9625-201ENSMUST00000180422 955 ntBASIC12.4□□□□□ -0.42
Alx1Q8C8B0 Trav18-202ENSMUST00000186573 325 ntAPPRIS ALT2 BASIC12.4□□□□□ -0.42
Alx1Q8C8B0 Gm28893-201ENSMUST00000190951 1108 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Alx1Q8C8B0 Gm7445-201ENSMUST00000192115 340 ntBASIC12.4□□□□□ -0.42
Alx1Q8C8B0 Gm39091-201ENSMUST00000206189 553 ntTSL 2 BASIC12.4□□□□□ -0.42
Alx1Q8C8B0 Gm45682-201ENSMUST00000209434 1256 ntTSL 5 BASIC12.4□□□□□ -0.42
Alx1Q8C8B0 Gm45363-201ENSMUST00000210196 1294 ntBASIC12.4□□□□□ -0.42
Alx1Q8C8B0 Ppm1a-205ENSMUST00000222896 1103 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Alx1Q8C8B0 Calm4-201ENSMUST00000042219 917 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
Alx1Q8C8B0 Gemin8-203ENSMUST00000096252 1039 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Alx1Q8C8B0 Oplah-209ENSMUST00000171340 4085 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Alx1Q8C8B0 Jade2-203ENSMUST00000109091 6099 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Alx1Q8C8B0 Cxcl12-203ENSMUST00000112871 3132 ntAPPRIS P4 TSL 1 (best) BASIC12.4□□□□□ -0.42
Alx1Q8C8B0 Pole-202ENSMUST00000112481 1523 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 34.2 ms