Protein–RNA interactions for Protein: P97801

Smn1, Survival motor neuron protein, mousemouse

Predictions only

Length 288 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smn1P97801 Snhg18-201ENSMUST00000181536 1486 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
Smn1P97801 Gsdma2-201ENSMUST00000017355 1314 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
Smn1P97801 Gm20831-201ENSMUST00000177639 1337 ntAPPRIS P1 TSL 5 BASIC9.09□□□□□ -0.95
Smn1P97801 Gm20737-202ENSMUST00000187245 1338 ntAPPRIS P1 TSL 5 BASIC9.09□□□□□ -0.95
Smn1P97801 Gm20777-202ENSMUST00000187434 1341 ntAPPRIS P1 TSL 5 BASIC9.09□□□□□ -0.95
Smn1P97801 Gm20873-202ENSMUST00000187857 1342 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Smn1P97801 Gm20772-201ENSMUST00000188928 1343 ntAPPRIS P1 TSL 5 BASIC9.09□□□□□ -0.95
Smn1P97801 Gm21310-202ENSMUST00000189630 1343 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Smn1P97801 Gm29590-201ENSMUST00000190396 1304 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
Smn1P97801 Gm20795-202ENSMUST00000190909 1344 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Smn1P97801 Gm21440-201ENSMUST00000192749 1344 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Smn1P97801 Gm20831-202ENSMUST00000194411 1344 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Smn1P97801 Gm21425-202ENSMUST00000195626 1345 ntAPPRIS P1 TSL 5 BASIC9.09□□□□□ -0.95
Smn1P97801 Gm6641-201ENSMUST00000196100 1315 ntBASIC9.09□□□□□ -0.95
Smn1P97801 Gm45765-202ENSMUST00000212921 1313 ntTSL 5 BASIC9.09□□□□□ -0.95
Smn1P97801 Abcb8-203ENSMUST00000115077 3074 ntAPPRIS P1 TSL 5 BASIC9.09□□□□□ -0.95
Smn1P97801 Galnt16-201ENSMUST00000021558 3922 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Smn1P97801 Smad9-201ENSMUST00000029371 5368 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Smn1P97801 Fbxl12-206ENSMUST00000148631 3756 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Smn1P97801 Tada2a-201ENSMUST00000018795 2151 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Smn1P97801 Cyp7b1-201ENSMUST00000035625 2166 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Smn1P97801 Zbtb3-201ENSMUST00000172175 2037 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Smn1P97801 Cx3cl1-201ENSMUST00000034230 3315 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Smn1P97801 Gripap1-201ENSMUST00000065932 3156 ntAPPRIS P3 TSL 1 (best) BASIC9.09□□□□□ -0.95
Smn1P97801 Ung-203ENSMUST00000112275 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC9.09□□□□□ -0.95
Smn1P97801 Gm38312-201ENSMUST00000195426 1746 ntBASIC9.09□□□□□ -0.95
Smn1P97801 E330034L11Rik-201ENSMUST00000200640 1742 ntBASIC9.09□□□□□ -0.95
Smn1P97801 4732490B19Rik-201ENSMUST00000130373 2446 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
Smn1P97801 Zzef1-207ENSMUST00000172220 11249 ntAPPRIS ALT2 TSL 5 BASIC9.09□□□□□ -0.95
Smn1P97801 Ptpn21-201ENSMUST00000085116 5696 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Smn1P97801 4930522L14Rik-201ENSMUST00000100937 599 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
Smn1P97801 Ypel3-202ENSMUST00000106356 785 ntAPPRIS P1 TSL 5 BASIC9.09□□□□□ -0.95
Smn1P97801 S100a16-206ENSMUST00000107335 926 ntAPPRIS P1 TSL 5 BASIC9.09□□□□□ -0.95
Smn1P97801 Gm14028-201ENSMUST00000117434 479 ntBASIC9.09□□□□□ -0.95
Smn1P97801 Gm16166-201ENSMUST00000118291 787 ntBASIC9.09□□□□□ -0.95
Smn1P97801 Thbs3-202ENSMUST00000119084 2993 ntAPPRIS ALT2 TSL 5 BASIC9.09□□□□□ -0.95
Smn1P97801 Smim5-202ENSMUST00000142089 685 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Smn1P97801 Gm15952-202ENSMUST00000144542 556 ntTSL 3 BASIC9.09□□□□□ -0.95
Smn1P97801 Smim5-203ENSMUST00000152171 1113 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Smn1P97801 Gm23958-201ENSMUST00000157207 105 ntBASIC9.09□□□□□ -0.95
Smn1P97801 Gm23699-201ENSMUST00000158835 135 ntBASIC9.09□□□□□ -0.95
Smn1P97801 Gm38304-201ENSMUST00000161826 600 ntTSL 3 BASIC9.09□□□□□ -0.95
Smn1P97801 AU015836-205ENSMUST00000163458 911 ntAPPRIS P1 TSL 5 BASIC9.09□□□□□ -0.95
Smn1P97801 Anp32e-206ENSMUST00000169426 915 ntTSL 5 BASIC9.09□□□□□ -0.95
Smn1P97801 Csmd2os-202ENSMUST00000179945 643 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
Smn1P97801 Iqcf3-202ENSMUST00000186668 633 ntAPPRIS ALT2 TSL 5 BASIC9.09□□□□□ -0.95
Smn1P97801 Gm44968-201ENSMUST00000207652 1171 ntTSL 5 BASIC9.09□□□□□ -0.95
Smn1P97801 Gm7319-201ENSMUST00000210047 778 ntBASIC9.09□□□□□ -0.95
Smn1P97801 Thyn1-202ENSMUST00000213683 1107 ntAPPRIS P1 TSL 5 BASIC9.09□□□□□ -0.95
Smn1P97801 2310039L15Rik-203ENSMUST00000220058 727 ntTSL 5 BASIC9.09□□□□□ -0.95
Smn1P97801 AC154290.1-201ENSMUST00000223786 1240 ntBASIC9.09□□□□□ -0.95
Smn1P97801 AC122035.1-201ENSMUST00000227576 1016 ntBASIC9.09□□□□□ -0.95
Smn1P97801 Cd320-202ENSMUST00000087559 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC9.09□□□□□ -0.95
Smn1P97801 Trpt1-201ENSMUST00000088223 1142 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Smn1P97801 Wwtr1-202ENSMUST00000120977 4533 ntAPPRIS ALT2 TSL 1 (best) BASIC9.09□□□□□ -0.95
Smn1P97801 Med12l-206ENSMUST00000199659 11006 ntAPPRIS P2 TSL 5 BASIC9.09□□□□□ -0.95
Smn1P97801 Slc24a1-201ENSMUST00000037798 5213 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Smn1P97801 Gm10031-201ENSMUST00000190422 2653 ntAPPRIS P1 BASIC9.09□□□□□ -0.95
Smn1P97801 Als2-201ENSMUST00000027178 6342 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Smn1P97801 Ints6l-201ENSMUST00000039374 3766 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Smn1P97801 Eno2-202ENSMUST00000112476 2386 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
Smn1P97801 Gm10748-202ENSMUST00000194396 2379 ntBASIC9.09□□□□□ -0.95
Smn1P97801 Nr2c1-201ENSMUST00000092213 2376 ntAPPRIS P1 TSL 5 BASIC9.09□□□□□ -0.95
Smn1P97801 Gm45012-201ENSMUST00000208323 1666 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
Smn1P97801 Fam118b-202ENSMUST00000063782 1662 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
Smn1P97801 Arid5a-202ENSMUST00000115029 4329 ntTSL 3 BASIC9.09□□□□□ -0.95
Smn1P97801 9330175E14Rik-201ENSMUST00000180445 4852 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
Smn1P97801 Carmil2-203ENSMUST00000213019 4194 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Smn1P97801 4933413C19Rik-201ENSMUST00000162380 2217 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
Smn1P97801 Atp1a3-202ENSMUST00000102858 3895 ntTSL 2 BASIC9.09□□□□□ -0.95
Smn1P97801 Pum1-201ENSMUST00000030315 5389 ntAPPRIS P3 TSL 1 (best) BASIC9.09□□□□□ -0.95
Smn1P97801 Gm19027-201ENSMUST00000187291 1355 ntBASIC9.09□□□□□ -0.95
Smn1P97801 4933422A05Rik-201ENSMUST00000213706 1356 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
Smn1P97801 Gm5136-201ENSMUST00000218023 1397 ntAPPRIS P1 BASIC9.09□□□□□ -0.95
Smn1P97801 Got1l1-201ENSMUST00000038174 1356 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Smn1P97801 Elavl1-204ENSMUST00000209010 2317 ntAPPRIS P1 TSL 5 BASIC9.09□□□□□ -0.95
Smn1P97801 Gm8320-201ENSMUST00000177584 1762 ntBASIC9.09□□□□□ -0.95
Smn1P97801 Gm8303-201ENSMUST00000178371 1762 ntBASIC9.09□□□□□ -0.95
Smn1P97801 Gm8331-201ENSMUST00000178433 1762 ntBASIC9.09□□□□□ -0.95
Smn1P97801 Ncoa1-209ENSMUST00000220434 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC9.09□□□□□ -0.95
Smn1P97801 Gm40557-201ENSMUST00000220782 2736 ntTSL 5 BASIC9.09□□□□□ -0.95
Smn1P97801 Gm5122-202ENSMUST00000216854 1637 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
Smn1P97801 Cped1-201ENSMUST00000115382 2002 ntAPPRIS ALT2 TSL 5 BASIC9.09□□□□□ -0.95
Smn1P97801 AC164099.2-201ENSMUST00000227795 2005 ntAPPRIS P1 BASIC9.09□□□□□ -0.95
Smn1P97801 Supt7l-205ENSMUST00000202421 3056 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
Smn1P97801 Dido1-205ENSMUST00000103056 4281 ntAPPRIS ALT2 TSL 1 (best) BASIC9.08□□□□□ -0.96
Smn1P97801 Scmh1-202ENSMUST00000064991 2548 ntAPPRIS ALT2 TSL 5 BASIC9.08□□□□□ -0.96
Smn1P97801 Itih3-205ENSMUST00000227995 2100 ntAPPRIS ALT2 BASIC9.08□□□□□ -0.96
Smn1P97801 Slc1a2-202ENSMUST00000080210 11595 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Smn1P97801 Tubb5-201ENSMUST00000001566 2649 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Smn1P97801 Zfp948-201ENSMUST00000088787 2612 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Smn1P97801 H2-Eb2-201ENSMUST00000050325 2209 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Smn1P97801 Slc28a1-202ENSMUST00000119083 2899 ntAPPRIS P1 TSL 5 BASIC9.08□□□□□ -0.96
Smn1P97801 Gm16429-202ENSMUST00000201400 1848 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Smn1P97801 Gm7971-201ENSMUST00000086950 1848 ntAPPRIS P1 TSL 5 BASIC9.08□□□□□ -0.96
Smn1P97801 Acnat2-202ENSMUST00000107698 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC9.08□□□□□ -0.96
Smn1P97801 Il1r1-201ENSMUST00000027241 5819 ntAPPRIS P3 TSL 1 (best) BASIC9.08□□□□□ -0.96
Smn1P97801 Calr4-204ENSMUST00000106631 2155 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
Smn1P97801 Reep1-203ENSMUST00000212792 3339 ntTSL 5 BASIC9.08□□□□□ -0.96
Smn1P97801 Trmt10b-202ENSMUST00000107800 983 ntAPPRIS ALT2 TSL 5 BASIC9.08□□□□□ -0.96
Retrieved 100 of 76,532 protein–RNA pairs in 50 ms