Protein–RNA interactions for Protein: P61969

Lmo4, LIM domain transcription factor LMO4, mousemouse

Predictions only

Length 165 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lmo4P61969 Exosc9-201ENSMUST00000029269 1617 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
Lmo4P61969 Cpt1c-201ENSMUST00000063761 2793 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
Lmo4P61969 Ankrd36-201ENSMUST00000109855 1363 ntAPPRIS ALT2 TSL 1 (best) BASIC8.61□□□□□ -1.03
Lmo4P61969 Lrrc57-201ENSMUST00000102496 1848 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
Lmo4P61969 Gtf2a1-202ENSMUST00000063314 2265 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
Lmo4P61969 Shank2-202ENSMUST00000105900 8169 ntTSL 5 BASIC8.61□□□□□ -1.03
Lmo4P61969 Vbp1-201ENSMUST00000033540 1595 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
Lmo4P61969 C4a-207ENSMUST00000160679 5371 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
Lmo4P61969 Gm42372-201ENSMUST00000206129 5067 ntAPPRIS P1 BASIC8.61□□□□□ -1.03
Lmo4P61969 Ablim2-206ENSMUST00000114206 3528 ntAPPRIS ALT2 TSL 5 BASIC8.61□□□□□ -1.03
Lmo4P61969 Zbtb44-201ENSMUST00000115222 8861 ntTSL 5 BASIC8.61□□□□□ -1.03
Lmo4P61969 Morf4l2-213ENSMUST00000166478 1720 ntAPPRIS P1 TSL 2 BASIC8.61□□□□□ -1.03
Lmo4P61969 Dph2-201ENSMUST00000030265 2555 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
Lmo4P61969 Gm26642-201ENSMUST00000180981 2782 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
Lmo4P61969 Tsku-201ENSMUST00000094161 2760 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
Lmo4P61969 Dhx38-201ENSMUST00000042601 4463 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
Lmo4P61969 Guca2b-202ENSMUST00000106309 697 ntAPPRIS ALT2 TSL 3 BASIC8.61□□□□□ -1.03
Lmo4P61969 Gm12009-201ENSMUST00000121361 1100 ntBASIC8.61□□□□□ -1.03
Lmo4P61969 Ndufb5-202ENSMUST00000121778 574 ntTSL 3 BASIC8.61□□□□□ -1.03
Lmo4P61969 Gm28356-201ENSMUST00000186941 927 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
Lmo4P61969 Gm37141-201ENSMUST00000191938 422 ntBASIC8.61□□□□□ -1.03
Lmo4P61969 Gm33707-201ENSMUST00000195135 569 ntBASIC8.61□□□□□ -1.03
Lmo4P61969 1700048F04Rik-201ENSMUST00000199057 1064 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
Lmo4P61969 Gm7319-201ENSMUST00000210047 778 ntBASIC8.61□□□□□ -1.03
Lmo4P61969 Gm13539-202ENSMUST00000211245 552 ntAPPRIS P1 TSL 5 BASIC8.61□□□□□ -1.03
Lmo4P61969 Cklf-210ENSMUST00000212939 737 ntAPPRIS ALT2 TSL 3 BASIC8.61□□□□□ -1.03
Lmo4P61969 Gm40761-201ENSMUST00000219123 1153 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
Lmo4P61969 Isca2-206ENSMUST00000222449 374 ntTSL 2 BASIC8.61□□□□□ -1.03
Lmo4P61969 CAAA01139602.1-201ENSMUST00000222545 283 ntBASIC8.61□□□□□ -1.03
Lmo4P61969 AC161052.1-201ENSMUST00000222856 910 ntTSL 5 BASIC8.61□□□□□ -1.03
Lmo4P61969 Ccl25-201ENSMUST00000024004 1058 ntAPPRIS P2 TSL 1 (best) BASIC8.61□□□□□ -1.03
Lmo4P61969 Gm9531-201ENSMUST00000055820 638 ntTSL 3 BASIC8.61□□□□□ -1.03
Lmo4P61969 Tprg-201ENSMUST00000056087 1084 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
Lmo4P61969 Olfr47-201ENSMUST00000078057 1059 ntAPPRIS P1 BASIC8.61□□□□□ -1.03
Lmo4P61969 Gm5148-201ENSMUST00000079755 1265 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
Lmo4P61969 Cd300c2-201ENSMUST00000092464 1187 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
Lmo4P61969 Mrps14-202ENSMUST00000097193 787 ntTSL 2 BASIC8.61□□□□□ -1.03
Lmo4P61969 Ccdc162-212ENSMUST00000219054 3182 ntTSL 5 BASIC8.61□□□□□ -1.03
Lmo4P61969 AC159810.1-201ENSMUST00000214838 1480 ntBASIC8.61□□□□□ -1.03
Lmo4P61969 Vwa7-202ENSMUST00000172499 3970 ntAPPRIS ALT2 TSL 1 (best) BASIC8.61□□□□□ -1.03
Lmo4P61969 Ccpg1-208ENSMUST00000150826 2939 ntAPPRIS ALT2 TSL 1 (best) BASIC8.61□□□□□ -1.03
Lmo4P61969 Ccdc62-201ENSMUST00000094320 3924 ntAPPRIS P1 TSL 5 BASIC8.61□□□□□ -1.03
Lmo4P61969 Trim46-203ENSMUST00000107464 3252 ntTSL 5 BASIC8.61□□□□□ -1.03
Lmo4P61969 Lrrc23-202ENSMUST00000112475 1444 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
Lmo4P61969 Spef2-203ENSMUST00000159368 1422 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
Lmo4P61969 Ahi1-201ENSMUST00000105525 4851 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
Lmo4P61969 Gm45397-201ENSMUST00000209816 1600 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
Lmo4P61969 Dph5-202ENSMUST00000106505 1836 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
Lmo4P61969 C130026L21Rik-204ENSMUST00000199587 1838 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
Lmo4P61969 Bcl2l14-201ENSMUST00000032321 2243 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
Lmo4P61969 A330033J07Rik-201ENSMUST00000180921 2816 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
Lmo4P61969 Gm20696-201ENSMUST00000155466 3560 ntAPPRIS P1 TSL 2 BASIC8.61□□□□□ -1.03
Lmo4P61969 Hs1bp3-201ENSMUST00000020927 2959 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
Lmo4P61969 Olfr1344-202ENSMUST00000218906 2590 ntAPPRIS P1 TSL 5 BASIC8.61□□□□□ -1.03
Lmo4P61969 Cyp7b1-201ENSMUST00000035625 2166 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
Lmo4P61969 Hmox1-201ENSMUST00000005548 1569 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
Lmo4P61969 Bms1-201ENSMUST00000032237 4345 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
Lmo4P61969 Gm44975-201ENSMUST00000207435 1390 ntBASIC8.61□□□□□ -1.03
Lmo4P61969 Arih2-201ENSMUST00000013338 3924 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
Lmo4P61969 Mrgprd-201ENSMUST00000062163 3144 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
Lmo4P61969 Crispld2-202ENSMUST00000108972 2928 ntAPPRIS P3 TSL 1 (best) BASIC8.6□□□□□ -1.03
Lmo4P61969 Entpd8-203ENSMUST00000114380 2301 ntAPPRIS P2 TSL 1 (best) BASIC8.6□□□□□ -1.03
Lmo4P61969 Gm31138-201ENSMUST00000212296 1705 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
Lmo4P61969 Lox-201ENSMUST00000025409 3604 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
Lmo4P61969 Gm45076-201ENSMUST00000207517 1517 ntTSL 5 BASIC8.6□□□□□ -1.03
Lmo4P61969 Xlr4c-201ENSMUST00000068551 1500 ntAPPRIS P1 TSL 5 BASIC8.6□□□□□ -1.03
Lmo4P61969 Unkl-201ENSMUST00000015271 3414 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
Lmo4P61969 Agpat3-211ENSMUST00000166360 3439 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
Lmo4P61969 Gm29590-201ENSMUST00000190396 1304 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
Lmo4P61969 4930447F24Rik-201ENSMUST00000194140 1341 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
Lmo4P61969 Rbm6-201ENSMUST00000035201 3999 ntAPPRIS P3 TSL 1 (best) BASIC8.6□□□□□ -1.03
Lmo4P61969 Pdha1-201ENSMUST00000033662 2848 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
Lmo4P61969 Plrg1-204ENSMUST00000150268 1851 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
Lmo4P61969 E230029C05Rik-205ENSMUST00000208362 2444 ntTSL 2 BASIC8.6□□□□□ -1.03
Lmo4P61969 Gm45170-201ENSMUST00000206746 1671 ntBASIC8.6□□□□□ -1.03
Lmo4P61969 AC122291.1-201ENSMUST00000228937 5748 ntBASIC8.6□□□□□ -1.03
Lmo4P61969 Gm36940-201ENSMUST00000194281 2036 ntBASIC8.6□□□□□ -1.03
Lmo4P61969 Snx13-202ENSMUST00000163677 3681 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
Lmo4P61969 Pde2a-201ENSMUST00000163751 4218 ntAPPRIS ALT2 TSL 1 (best) BASIC8.6□□□□□ -1.03
Lmo4P61969 Adora1-203ENSMUST00000169927 4581 ntAPPRIS P1 TSL 5 BASIC8.6□□□□□ -1.03
Lmo4P61969 Dmbx1-203ENSMUST00000124071 4017 ntAPPRIS P2 TSL 1 (best) BASIC8.6□□□□□ -1.03
Lmo4P61969 A1bg-201ENSMUST00000096418 1821 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
Lmo4P61969 A930003A15Rik-201ENSMUST00000100083 746 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
Lmo4P61969 Gm22582-201ENSMUST00000102283 94 ntBASIC8.6□□□□□ -1.03
Lmo4P61969 Mir181d-201ENSMUST00000102383 72 ntBASIC8.6□□□□□ -1.03
Lmo4P61969 Smim24-201ENSMUST00000105322 901 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
Lmo4P61969 Gm13426-201ENSMUST00000117887 795 ntBASIC8.6□□□□□ -1.03
Lmo4P61969 Gm15746-201ENSMUST00000120684 1027 ntBASIC8.6□□□□□ -1.03
Lmo4P61969 Gm11701-201ENSMUST00000121277 1142 ntBASIC8.6□□□□□ -1.03
Lmo4P61969 Gm14176-201ENSMUST00000121302 477 ntBASIC8.6□□□□□ -1.03
Lmo4P61969 Ubl5-203ENSMUST00000160124 501 ntAPPRIS P1 TSL 2 BASIC8.6□□□□□ -1.03
Lmo4P61969 Rab11a-204ENSMUST00000167569 726 ntTSL 3 BASIC8.6□□□□□ -1.03
Lmo4P61969 Rab26-204ENSMUST00000176533 965 ntAPPRIS ALT2 TSL 5 BASIC8.6□□□□□ -1.03
Lmo4P61969 Erg-209ENSMUST00000177450 1280 ntTSL 5 BASIC8.6□□□□□ -1.03
Lmo4P61969 Gm20091-201ENSMUST00000179683 189 ntBASIC8.6□□□□□ -1.03
Lmo4P61969 1700026J14Rik-201ENSMUST00000180937 794 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
Lmo4P61969 Rian-210ENSMUST00000182689 295 ntTSL 5 BASIC8.6□□□□□ -1.03
Lmo4P61969 Gm4812-201ENSMUST00000182847 993 ntBASIC8.6□□□□□ -1.03
Lmo4P61969 Gm18443-201ENSMUST00000185358 556 ntBASIC8.6□□□□□ -1.03
Lmo4P61969 Gm8525-201ENSMUST00000189674 861 ntBASIC8.6□□□□□ -1.03
Retrieved 100 of 76,532 protein–RNA pairs in 51.8 ms