Protein–RNA interactions for Protein: P50405

Sftpb, Pulmonary surfactant-associated protein B, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SftpbP50405 Gm4895-201ENSMUST00000181646 1137 ntBASIC10.86□□□□□ -0.67
SftpbP50405 Gm27910-201ENSMUST00000185004 107 ntBASIC10.86□□□□□ -0.67
SftpbP50405 1700119H24Rik-201ENSMUST00000187558 588 ntTSL 5 BASIC10.86□□□□□ -0.67
SftpbP50405 Gm35025-203ENSMUST00000193519 634 ntTSL 3 BASIC10.86□□□□□ -0.67
SftpbP50405 Gm18466-201ENSMUST00000209147 499 ntBASIC10.86□□□□□ -0.67
SftpbP50405 Gm31479-201ENSMUST00000209936 522 ntTSL 3 BASIC10.86□□□□□ -0.67
SftpbP50405 AC155637.1-201ENSMUST00000218560 636 ntBASIC10.86□□□□□ -0.67
SftpbP50405 Il17c-201ENSMUST00000050963 719 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
SftpbP50405 Ctxn2-201ENSMUST00000099452 1028 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
SftpbP50405 Nos1-206ENSMUST00000142742 10123 ntAPPRIS P2 TSL 5 BASIC10.86□□□□□ -0.67
SftpbP50405 Cox17-202ENSMUST00000120495 3690 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
SftpbP50405 Zfp317-205ENSMUST00000215372 2809 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
SftpbP50405 P4ha1-201ENSMUST00000009789 4043 ntAPPRIS P3 TSL 1 (best) BASIC10.86□□□□□ -0.67
SftpbP50405 Pcdhb19-201ENSMUST00000059571 7138 ntAPPRIS P1 BASIC10.86□□□□□ -0.67
SftpbP50405 4930417O13Rik-203ENSMUST00000204911 3458 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
SftpbP50405 Usp11-201ENSMUST00000033383 3467 ntAPPRIS P1 TSL 2 BASIC10.86□□□□□ -0.67
SftpbP50405 A230009B12Rik-202ENSMUST00000159602 1810 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
SftpbP50405 Gm37567-201ENSMUST00000193241 2279 ntBASIC10.86□□□□□ -0.67
SftpbP50405 Egr2-201ENSMUST00000048289 2965 ntAPPRIS P3 TSL 1 (best) BASIC10.86□□□□□ -0.67
SftpbP50405 Zfp474-201ENSMUST00000072666 1930 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
SftpbP50405 Cfap74-204ENSMUST00000123952 2365 ntAPPRIS P2 TSL 1 (best) BASIC10.85□□□□□ -0.67
SftpbP50405 Adat1-202ENSMUST00000120457 1677 ntTSL 5 BASIC10.85□□□□□ -0.67
SftpbP50405 Slc5a9-201ENSMUST00000102719 2460 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
SftpbP50405 Tor1aip2-204ENSMUST00000111754 2491 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
SftpbP50405 Grip1-216ENSMUST00000154238 2482 ntTSL 5 BASIC10.85□□□□□ -0.67
SftpbP50405 Aplp2-201ENSMUST00000072634 3634 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
SftpbP50405 Mfsd4a-201ENSMUST00000046658 3252 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
SftpbP50405 Agbl4-202ENSMUST00000097920 1798 ntAPPRIS P4 TSL 1 (best) BASIC10.85□□□□□ -0.67
SftpbP50405 Det1-202ENSMUST00000107431 1439 ntTSL 5 BASIC10.85□□□□□ -0.67
SftpbP50405 Gm8020-201ENSMUST00000170174 1406 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
SftpbP50405 4930486L24Rik-201ENSMUST00000091569 1432 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
SftpbP50405 Myo5a-201ENSMUST00000123128 11702 ntTSL 5 BASIC10.85□□□□□ -0.67
SftpbP50405 9630001P10Rik-201ENSMUST00000181083 2799 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
SftpbP50405 Cngb1-204ENSMUST00000121162 3336 ntAPPRIS ALT2 TSL 5 BASIC10.85□□□□□ -0.67
SftpbP50405 4932430I15Rik-201ENSMUST00000180431 3306 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
SftpbP50405 Eng-205ENSMUST00000167841 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
SftpbP50405 Mir9-3hg-202ENSMUST00000181511 3412 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
SftpbP50405 Fcrl1-202ENSMUST00000163661 1649 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
SftpbP50405 Gm7168-201ENSMUST00000088809 1603 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
SftpbP50405 D030068K23Rik-201ENSMUST00000180382 2617 ntTSL 2 BASIC10.85□□□□□ -0.67
SftpbP50405 Neurod6-201ENSMUST00000044767 2150 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
SftpbP50405 Otx2-202ENSMUST00000119070 1708 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
SftpbP50405 Skap1-206ENSMUST00000107663 742 ntTSL 3 BASIC10.85□□□□□ -0.67
SftpbP50405 4921508D12Rik-201ENSMUST00000124095 1075 ntTSL 2 BASIC10.85□□□□□ -0.67
SftpbP50405 Gm16226-204ENSMUST00000162639 423 ntTSL 3 BASIC10.85□□□□□ -0.67
SftpbP50405 Gm23771-201ENSMUST00000178702 110 ntBASIC10.85□□□□□ -0.67
SftpbP50405 Gm33080-201ENSMUST00000205429 172 ntBASIC10.85□□□□□ -0.67
SftpbP50405 Gm7319-201ENSMUST00000210047 778 ntBASIC10.85□□□□□ -0.67
SftpbP50405 CT009527.1-201ENSMUST00000224205 339 ntBASIC10.85□□□□□ -0.67
SftpbP50405 AC165260.2-203ENSMUST00000224237 336 ntBASIC10.85□□□□□ -0.67
SftpbP50405 Lgi3-203ENSMUST00000226548 1001 ntBASIC10.85□□□□□ -0.67
SftpbP50405 Smco2-201ENSMUST00000032433 1276 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
SftpbP50405 Naca-201ENSMUST00000073868 885 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
SftpbP50405 Hopx-201ENSMUST00000081964 1261 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
SftpbP50405 AC156631.1-201ENSMUST00000215213 1358 ntTSL 5 BASIC10.85□□□□□ -0.67
SftpbP50405 Tubgcp5-205ENSMUST00000205796 3448 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
SftpbP50405 Fcgr2b-204ENSMUST00000159969 1578 ntAPPRIS P4 TSL 1 (best) BASIC10.85□□□□□ -0.67
SftpbP50405 Tyw3-204ENSMUST00000170461 4270 ntTSL 5 BASIC10.85□□□□□ -0.67
SftpbP50405 Zkscan6-201ENSMUST00000018491 2302 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
SftpbP50405 Acacb-202ENSMUST00000102582 8788 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
SftpbP50405 Gm3642-201ENSMUST00000166895 1762 ntAPPRIS P5 TSL 5 BASIC10.85□□□□□ -0.67
SftpbP50405 Trpm2-203ENSMUST00000105401 7274 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
SftpbP50405 Phc1-215ENSMUST00000161739 3893 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
SftpbP50405 Gm11131-201ENSMUST00000113886 3122 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
SftpbP50405 Gckr-202ENSMUST00000201166 2272 ntAPPRIS ALT2 TSL 5 BASIC10.84□□□□□ -0.67
SftpbP50405 Tssk4-201ENSMUST00000007735 1420 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
SftpbP50405 Amer3-201ENSMUST00000052670 4392 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
SftpbP50405 Gm37058-201ENSMUST00000193393 1644 ntBASIC10.84□□□□□ -0.67
SftpbP50405 Gm3830-201ENSMUST00000185540 1715 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
SftpbP50405 Zscan21-203ENSMUST00000110959 2964 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
SftpbP50405 Serpina3g-201ENSMUST00000043315 1803 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
SftpbP50405 Fam161a-201ENSMUST00000058269 1927 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
SftpbP50405 Gm26658-201ENSMUST00000181067 2500 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
SftpbP50405 Cmya5-201ENSMUST00000062122 11850 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
SftpbP50405 Lct-201ENSMUST00000073490 6174 ntAPPRIS P1 TSL 2 BASIC10.84□□□□□ -0.67
SftpbP50405 Eif5a-206ENSMUST00000108609 849 ntAPPRIS P1 TSL 3 BASIC10.84□□□□□ -0.67
SftpbP50405 Adig-202ENSMUST00000109484 488 ntTSL 2 BASIC10.84□□□□□ -0.67
SftpbP50405 Snord23-201ENSMUST00000116828 109 ntBASIC10.84□□□□□ -0.67
SftpbP50405 Gm11246-201ENSMUST00000120880 345 ntBASIC10.84□□□□□ -0.67
SftpbP50405 Gm6408-201ENSMUST00000179032 1171 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
SftpbP50405 1700125G22Rik-201ENSMUST00000181124 861 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
SftpbP50405 Gm5210-201ENSMUST00000182150 1010 ntBASIC10.84□□□□□ -0.67
SftpbP50405 Gm43520-201ENSMUST00000197996 164 ntBASIC10.84□□□□□ -0.67
SftpbP50405 Gm43378-201ENSMUST00000199336 582 ntBASIC10.84□□□□□ -0.67
SftpbP50405 Gm33474-201ENSMUST00000199486 1231 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
SftpbP50405 Gm15802-202ENSMUST00000209595 1094 ntTSL 5 BASIC10.84□□□□□ -0.67
SftpbP50405 Gm30671-201ENSMUST00000214898 318 ntBASIC10.84□□□□□ -0.67
SftpbP50405 Mettl6-204ENSMUST00000227595 1027 ntBASIC10.84□□□□□ -0.67
SftpbP50405 Pvalb-201ENSMUST00000005860 977 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
SftpbP50405 Adig-201ENSMUST00000059889 632 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
SftpbP50405 Krtap6-2-201ENSMUST00000082065 786 ntAPPRIS P1 BASIC10.84□□□□□ -0.67
SftpbP50405 Pde2a-204ENSMUST00000209537 4100 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
SftpbP50405 Galnt16-206ENSMUST00000219993 4222 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
SftpbP50405 Pcdhgc5-201ENSMUST00000055935 4741 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
SftpbP50405 Txndc9-208ENSMUST00000195247 1699 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
SftpbP50405 Pced1b-204ENSMUST00000228521 1790 ntAPPRIS P1 BASIC10.84□□□□□ -0.67
SftpbP50405 Pld5-203ENSMUST00000111167 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
SftpbP50405 Bcl2l1-206ENSMUST00000140436 1865 ntTSL 2 BASIC10.84□□□□□ -0.67
SftpbP50405 5830462I19Rik-201ENSMUST00000168137 3383 ntBASIC10.84□□□□□ -0.67
SftpbP50405 Aen-203ENSMUST00000107425 4956 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 84 ms