Protein–RNA interactions for Protein: P50284

Ltbr, Tumor necrosis factor receptor superfamily member 3, mousemouse

Predictions only

Length 415 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LtbrP50284 Tpst1-202ENSMUST00000118993 1867 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
LtbrP50284 Srpk3-201ENSMUST00000002081 1981 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
LtbrP50284 Rap1gap-201ENSMUST00000047243 3247 ntAPPRIS P3 TSL 5 BASIC12.88□□□□□ -0.35
LtbrP50284 Fkbp15-204ENSMUST00000107461 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
LtbrP50284 Atxn7l1os2-201ENSMUST00000138617 2019 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
LtbrP50284 Olfr183-204ENSMUST00000214831 1906 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
LtbrP50284 Myo15b-208ENSMUST00000222123 5154 ntTSL 5 BASIC12.88□□□□□ -0.35
LtbrP50284 Platr25-207ENSMUST00000222477 1705 ntTSL 5 BASIC12.88□□□□□ -0.35
LtbrP50284 Fam163a-201ENSMUST00000015628 3882 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
LtbrP50284 Gm13684-201ENSMUST00000152569 2264 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
LtbrP50284 CT010480.4-201ENSMUST00000224654 2283 ntBASIC12.87□□□□□ -0.35
LtbrP50284 Ptprr-204ENSMUST00000128399 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
LtbrP50284 Smtn-203ENSMUST00000075118 3117 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
LtbrP50284 Rad17-201ENSMUST00000022136 2839 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
LtbrP50284 Gm5159-201ENSMUST00000212733 1652 ntBASIC12.87□□□□□ -0.35
LtbrP50284 Asph-212ENSMUST00000108340 6646 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
LtbrP50284 Ikzf2-204ENSMUST00000188110 1365 ntTSL 5 BASIC12.87□□□□□ -0.35
LtbrP50284 Ikzf2-208ENSMUST00000190855 1359 ntTSL 5 BASIC12.87□□□□□ -0.35
LtbrP50284 Upp1-202ENSMUST00000101525 1157 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
LtbrP50284 Hist1h4i-201ENSMUST00000102977 727 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
LtbrP50284 Gm15636-201ENSMUST00000119205 668 ntBASIC12.87□□□□□ -0.35
LtbrP50284 Gm11952-201ENSMUST00000121172 821 ntBASIC12.87□□□□□ -0.35
LtbrP50284 Gm12745-201ENSMUST00000121767 214 ntBASIC12.87□□□□□ -0.35
LtbrP50284 Ndufb5-202ENSMUST00000121778 574 ntTSL 3 BASIC12.87□□□□□ -0.35
LtbrP50284 Gm25288-201ENSMUST00000122800 265 ntBASIC12.87□□□□□ -0.35
LtbrP50284 3010001F23Rik-201ENSMUST00000130625 876 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
LtbrP50284 Gm17115-201ENSMUST00000164075 885 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
LtbrP50284 Mir3060-201ENSMUST00000175339 83 ntBASIC12.87□□□□□ -0.35
LtbrP50284 Higd1c-202ENSMUST00000177211 555 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
LtbrP50284 Gm37688-201ENSMUST00000195195 465 ntBASIC12.87□□□□□ -0.35
LtbrP50284 Gm43569-201ENSMUST00000196200 559 ntTSL 3 BASIC12.87□□□□□ -0.35
LtbrP50284 Gm42782-201ENSMUST00000197286 522 ntBASIC12.87□□□□□ -0.35
LtbrP50284 AC116797.2-202ENSMUST00000223587 1017 ntBASIC12.87□□□□□ -0.35
LtbrP50284 CT030035.1-201ENSMUST00000223964 935 ntBASIC12.87□□□□□ -0.35
LtbrP50284 Cxcl10-201ENSMUST00000038816 1094 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
LtbrP50284 Olfr115-201ENSMUST00000076936 939 ntAPPRIS P2 BASIC12.87□□□□□ -0.35
LtbrP50284 Amer2-201ENSMUST00000022561 10506 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
LtbrP50284 Gm38140-201ENSMUST00000193617 2755 ntBASIC12.87□□□□□ -0.35
LtbrP50284 Pcdh10-203ENSMUST00000171554 7273 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
LtbrP50284 Nmnat1-203ENSMUST00000119921 2657 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
LtbrP50284 Smtn-202ENSMUST00000020721 3335 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
LtbrP50284 Vstm2a-202ENSMUST00000109647 1745 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
LtbrP50284 Idi1-201ENSMUST00000169314 3027 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
LtbrP50284 Crispld2-202ENSMUST00000108972 2928 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
LtbrP50284 B3glct-201ENSMUST00000100404 4570 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
LtbrP50284 Tiprl-201ENSMUST00000043235 4380 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
LtbrP50284 5031434O11Rik-201ENSMUST00000180404 3731 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
LtbrP50284 Gm43149-201ENSMUST00000198162 1422 ntBASIC12.87□□□□□ -0.35
LtbrP50284 Ankrd35-201ENSMUST00000048427 4052 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
LtbrP50284 Etfrf1-201ENSMUST00000039729 2436 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
LtbrP50284 Gm9575-201ENSMUST00000122140 1339 ntBASIC12.87□□□□□ -0.35
LtbrP50284 Gm44509-201ENSMUST00000205400 1324 ntBASIC12.87□□□□□ -0.35
LtbrP50284 Kdm5c-201ENSMUST00000082177 5520 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
LtbrP50284 Wfdc8-202ENSMUST00000109338 1794 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
LtbrP50284 Serpina1b-202ENSMUST00000164454 1760 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
LtbrP50284 Inpp4a-203ENSMUST00000114933 3004 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
LtbrP50284 Gm20121-201ENSMUST00000198547 1594 ntBASIC12.86□□□□□ -0.35
LtbrP50284 Akap3-201ENSMUST00000095440 3153 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
LtbrP50284 B430203G13Rik-201ENSMUST00000169657 1375 ntBASIC12.86□□□□□ -0.35
LtbrP50284 Prr13-205ENSMUST00000171245 1353 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
LtbrP50284 Qsox1-201ENSMUST00000035325 3348 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
LtbrP50284 Reln-201ENSMUST00000062372 10885 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
LtbrP50284 Igll1-201ENSMUST00000100136 870 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
LtbrP50284 Myl1-203ENSMUST00000120415 621 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
LtbrP50284 Gm16441-201ENSMUST00000138176 924 ntBASIC12.86□□□□□ -0.35
LtbrP50284 1700017J07Rik-201ENSMUST00000140241 473 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
LtbrP50284 Gm12056-201ENSMUST00000148364 1257 ntTSL 5 BASIC12.86□□□□□ -0.35
LtbrP50284 Gm26725-201ENSMUST00000180652 1113 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
LtbrP50284 Gm8601-201ENSMUST00000182096 909 ntBASIC12.86□□□□□ -0.35
LtbrP50284 Milr1-206ENSMUST00000182896 918 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
LtbrP50284 Milr1-207ENSMUST00000182908 811 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
LtbrP50284 Gapdh-ps14-201ENSMUST00000183246 1002 ntBASIC12.86□□□□□ -0.35
LtbrP50284 Gm27316-201ENSMUST00000184884 277 ntBASIC12.86□□□□□ -0.35
LtbrP50284 Gm31520-203ENSMUST00000204874 647 ntTSL 3 BASIC12.86□□□□□ -0.35
LtbrP50284 Gm44908-201ENSMUST00000208610 266 ntBASIC12.86□□□□□ -0.35
LtbrP50284 Hcst-203ENSMUST00000208740 366 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
LtbrP50284 Gm20063-201ENSMUST00000220757 1089 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
LtbrP50284 Gm29689-201ENSMUST00000221076 589 ntBASIC12.86□□□□□ -0.35
LtbrP50284 Gm34165-201ENSMUST00000222012 1174 ntBASIC12.86□□□□□ -0.35
LtbrP50284 AC124687.5-201ENSMUST00000222734 596 ntTSL 5 BASIC12.86□□□□□ -0.35
LtbrP50284 CT030195.2-201ENSMUST00000226074 1286 ntBASIC12.86□□□□□ -0.35
LtbrP50284 AC154589.2-201ENSMUST00000228847 251 ntBASIC12.86□□□□□ -0.35
LtbrP50284 H2-Aa-201ENSMUST00000040655 1132 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
LtbrP50284 Fthl17a-201ENSMUST00000048382 835 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
LtbrP50284 Gm43061-201ENSMUST00000198850 2241 ntBASIC12.86□□□□□ -0.35
LtbrP50284 Ap5s1-203ENSMUST00000110208 1521 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
LtbrP50284 Atp6v1c2-202ENSMUST00000095820 1549 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
LtbrP50284 Ubap2l-201ENSMUST00000029553 3509 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
LtbrP50284 Dzip1l-202ENSMUST00000112884 3791 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
LtbrP50284 Gm35850-202ENSMUST00000211705 2120 ntBASIC12.86□□□□□ -0.35
LtbrP50284 Eng-201ENSMUST00000009705 3422 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
LtbrP50284 Gm5422-201ENSMUST00000050717 2721 ntBASIC12.86□□□□□ -0.35
LtbrP50284 AC153380.1-201ENSMUST00000214959 2364 ntBASIC12.86□□□□□ -0.35
LtbrP50284 Rps6ka6-202ENSMUST00000082034 4170 ntAPPRIS P2 TSL 5 BASIC12.86□□□□□ -0.35
LtbrP50284 Syk-202ENSMUST00000118756 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
LtbrP50284 Dock11-201ENSMUST00000033419 6665 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
LtbrP50284 Zbtb1-201ENSMUST00000042779 12190 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
LtbrP50284 Ttll10-202ENSMUST00000051509 2304 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
LtbrP50284 Chrnb2-201ENSMUST00000029562 6399 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
LtbrP50284 1810019N24Rik-201ENSMUST00000181128 1474 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 44.6 ms