Protein–RNA interactions for Protein: P40224

Cxcl12, Stromal cell-derived factor 1, mousemouse

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl12P40224 Wdcp-205ENSMUST00000220215 2202 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Cxcl12P40224 9530077C05Rik-201ENSMUST00000058868 2223 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Cxcl12P40224 Taf1b-201ENSMUST00000075954 2209 ntAPPRIS P2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Cxcl12P40224 Ccnt2-201ENSMUST00000027587 6738 ntAPPRIS P2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Cxcl12P40224 Nfe2l1-203ENSMUST00000107658 4219 ntAPPRIS P3 TSL 1 (best) BASIC10.98□□□□□ -0.65
Cxcl12P40224 Mecomos-201ENSMUST00000125611 5510 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Cxcl12P40224 Atp6v0e2-202ENSMUST00000203011 1612 ntTSL 2 BASIC10.98□□□□□ -0.65
Cxcl12P40224 Nono-201ENSMUST00000033673 2562 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Cxcl12P40224 CN725425-201ENSMUST00000109284 1929 ntAPPRIS ALT2 TSL 5 BASIC10.98□□□□□ -0.65
Cxcl12P40224 Mak16-201ENSMUST00000033983 1902 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Cxcl12P40224 Vmn1r38-201ENSMUST00000226457 3462 ntAPPRIS P1 BASIC10.98□□□□□ -0.65
Cxcl12P40224 Gm5046-201ENSMUST00000100608 611 ntBASIC10.98□□□□□ -0.65
Cxcl12P40224 Tmem254c-201ENSMUST00000100818 1066 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Cxcl12P40224 Fthl17b-201ENSMUST00000105006 842 ntAPPRIS P1 BASIC10.98□□□□□ -0.65
Cxcl12P40224 Gm8482-201ENSMUST00000117972 471 ntBASIC10.98□□□□□ -0.65
Cxcl12P40224 Gm13841-201ENSMUST00000118829 483 ntBASIC10.98□□□□□ -0.65
Cxcl12P40224 Gm11449-201ENSMUST00000119175 476 ntBASIC10.98□□□□□ -0.65
Cxcl12P40224 Gm6881-201ENSMUST00000121811 833 ntBASIC10.98□□□□□ -0.65
Cxcl12P40224 Gm15929-201ENSMUST00000138926 1161 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Cxcl12P40224 Gm15699-201ENSMUST00000159213 280 ntTSL 5 BASIC10.98□□□□□ -0.65
Cxcl12P40224 Baat-202ENSMUST00000166036 1263 ntAPPRIS P1 TSL 3 BASIC10.98□□□□□ -0.65
Cxcl12P40224 Gm8210-201ENSMUST00000178557 483 ntBASIC10.98□□□□□ -0.65
Cxcl12P40224 Gm15454-201ENSMUST00000179718 483 ntBASIC10.98□□□□□ -0.65
Cxcl12P40224 Gm27200-201ENSMUST00000184626 657 ntTSL 3 BASIC10.98□□□□□ -0.65
Cxcl12P40224 Rwdd2a-203ENSMUST00000185566 1054 ntAPPRIS P1 TSL 2 BASIC10.98□□□□□ -0.65
Cxcl12P40224 A430093F15Rik-204ENSMUST00000186596 2115 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Cxcl12P40224 1110025M09Rik-201ENSMUST00000192082 855 ntBASIC10.98□□□□□ -0.65
Cxcl12P40224 Ighv1-8-201ENSMUST00000192236 293 ntBASIC10.98□□□□□ -0.65
Cxcl12P40224 Gm37590-201ENSMUST00000193294 603 ntTSL 5 BASIC10.98□□□□□ -0.65
Cxcl12P40224 Gm5543-201ENSMUST00000193329 1091 ntBASIC10.98□□□□□ -0.65
Cxcl12P40224 Gm45363-201ENSMUST00000210196 1294 ntBASIC10.98□□□□□ -0.65
Cxcl12P40224 Gm45808-201ENSMUST00000210701 789 ntAPPRIS P1 TSL 5 BASIC10.98□□□□□ -0.65
Cxcl12P40224 Tmem238l-203ENSMUST00000211300 930 ntAPPRIS P1 TSL 3 BASIC10.98□□□□□ -0.65
Cxcl12P40224 AC100406.1-201ENSMUST00000217305 480 ntBASIC10.98□□□□□ -0.65
Cxcl12P40224 Gm32828-202ENSMUST00000219198 2111 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Cxcl12P40224 Magoh-201ENSMUST00000030348 692 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Cxcl12P40224 Gm6344-201ENSMUST00000075962 483 ntBASIC10.98□□□□□ -0.65
Cxcl12P40224 Olfr403-201ENSMUST00000076675 942 ntAPPRIS P1 BASIC10.98□□□□□ -0.65
Cxcl12P40224 Olfr43-201ENSMUST00000078936 1092 ntAPPRIS P1 BASIC10.98□□□□□ -0.65
Cxcl12P40224 n-R5s5-201ENSMUST00000083134 119 ntBASIC10.98□□□□□ -0.65
Cxcl12P40224 AC110091.3-201ENSMUST00000213406 1304 ntTSL 5 BASIC10.98□□□□□ -0.65
Cxcl12P40224 Madd-206ENSMUST00000099725 5905 ntAPPRIS ALT2 TSL 5 BASIC10.98□□□□□ -0.65
Cxcl12P40224 Bicra-204ENSMUST00000210781 5975 ntAPPRIS P1 TSL 5 BASIC10.98□□□□□ -0.65
Cxcl12P40224 Exd1-201ENSMUST00000060009 6042 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Cxcl12P40224 Olfr543-202ENSMUST00000219647 1456 ntAPPRIS P1 TSL 5 BASIC10.98□□□□□ -0.65
Cxcl12P40224 Apbb1-201ENSMUST00000081165 2530 ntAPPRIS ALT1 TSL 5 BASIC10.98□□□□□ -0.65
Cxcl12P40224 Ptpn14-202ENSMUST00000097442 10746 ntAPPRIS P2 TSL 5 BASIC10.98□□□□□ -0.65
Cxcl12P40224 Gm29895-201ENSMUST00000209933 5652 ntTSL 5 BASIC10.98□□□□□ -0.65
Cxcl12P40224 Neu2-206ENSMUST00000166259 1596 ntAPPRIS P3 TSL 1 (best) BASIC10.98□□□□□ -0.65
Cxcl12P40224 Rasgrp4-214ENSMUST00000205027 2717 ntTSL 5 BASIC10.98□□□□□ -0.65
Cxcl12P40224 Map3k11-201ENSMUST00000004156 3801 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Cxcl12P40224 Myo7a-204ENSMUST00000107128 7506 ntAPPRIS ALT2 TSL 5 BASIC10.98□□□□□ -0.65
Cxcl12P40224 Olfr707-204ENSMUST00000213251 1777 ntAPPRIS P1 TSL 5 BASIC10.98□□□□□ -0.65
Cxcl12P40224 C4a-207ENSMUST00000160679 5371 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Cxcl12P40224 St6galnac5-201ENSMUST00000044278 5667 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Cxcl12P40224 Npr2-202ENSMUST00000107874 3480 ntTSL 5 BASIC10.97□□□□□ -0.65
Cxcl12P40224 Spty2d1-201ENSMUST00000061639 5223 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Cxcl12P40224 Myo16-201ENSMUST00000042103 6725 ntAPPRIS ALT2 TSL 5 BASIC10.97□□□□□ -0.65
Cxcl12P40224 Gm33366-201ENSMUST00000195583 3827 ntBASIC10.97□□□□□ -0.65
Cxcl12P40224 Arih2-201ENSMUST00000013338 3924 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Cxcl12P40224 Dmbx1-202ENSMUST00000084338 4031 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Cxcl12P40224 C5ar1-201ENSMUST00000050770 2481 ntAPPRIS P1 TSL 3 BASIC10.97□□□□□ -0.65
Cxcl12P40224 Gm6211-201ENSMUST00000147973 4275 ntBASIC10.97□□□□□ -0.65
Cxcl12P40224 Aff3-202ENSMUST00000039827 6010 ntAPPRIS ALT2 TSL 5 BASIC10.97□□□□□ -0.65
Cxcl12P40224 Gm38187-201ENSMUST00000195609 4709 ntBASIC10.97□□□□□ -0.65
Cxcl12P40224 Gripap1-202ENSMUST00000101694 2867 ntAPPRIS ALT2 TSL 5 BASIC10.97□□□□□ -0.65
Cxcl12P40224 Gtf2ird1-206ENSMUST00000111244 3461 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Cxcl12P40224 8430423G03Rik-201ENSMUST00000110507 639 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Cxcl12P40224 Gm12420-201ENSMUST00000119869 1048 ntBASIC10.97□□□□□ -0.65
Cxcl12P40224 Pvalb-202ENSMUST00000120592 953 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Cxcl12P40224 Il24-201ENSMUST00000121040 1159 ntAPPRIS P2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Cxcl12P40224 Gm12362-201ENSMUST00000121986 342 ntBASIC10.97□□□□□ -0.65
Cxcl12P40224 Gm13134-201ENSMUST00000132106 738 ntTSL 3 BASIC10.97□□□□□ -0.65
Cxcl12P40224 Ubl5-203ENSMUST00000160124 501 ntAPPRIS P1 TSL 2 BASIC10.97□□□□□ -0.65
Cxcl12P40224 Speer4f2-201ENSMUST00000166086 1278 ntAPPRIS P1 TSL 5 BASIC10.97□□□□□ -0.65
Cxcl12P40224 Gm7138-201ENSMUST00000167669 693 ntAPPRIS P1 BASIC10.97□□□□□ -0.65
Cxcl12P40224 H2-Pb-201ENSMUST00000172731 531 ntBASIC10.97□□□□□ -0.65
Cxcl12P40224 Mir6981-201ENSMUST00000184293 115 ntBASIC10.97□□□□□ -0.65
Cxcl12P40224 Gm29669-201ENSMUST00000188605 881 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Cxcl12P40224 Gm2316-201ENSMUST00000190613 921 ntBASIC10.97□□□□□ -0.65
Cxcl12P40224 Gm8625-201ENSMUST00000194185 1077 ntBASIC10.97□□□□□ -0.65
Cxcl12P40224 Gm9771-201ENSMUST00000198267 1137 ntBASIC10.97□□□□□ -0.65
Cxcl12P40224 Gm5881-201ENSMUST00000204737 367 ntBASIC10.97□□□□□ -0.65
Cxcl12P40224 AC158122.1-201ENSMUST00000227398 673 ntBASIC10.97□□□□□ -0.65
Cxcl12P40224 Hcst-201ENSMUST00000075062 442 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Cxcl12P40224 D030068K23Rik-203ENSMUST00000181098 1399 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Cxcl12P40224 Gm8806-201ENSMUST00000120076 1407 ntBASIC10.97□□□□□ -0.65
Cxcl12P40224 Gm8122-201ENSMUST00000165988 1404 ntAPPRIS P1 TSL 5 BASIC10.97□□□□□ -0.65
Cxcl12P40224 AC154186.1-201ENSMUST00000227711 1597 ntBASIC10.97□□□□□ -0.65
Cxcl12P40224 Galnt10-201ENSMUST00000066987 4715 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Cxcl12P40224 Gm45003-201ENSMUST00000205875 2158 ntBASIC10.97□□□□□ -0.65
Cxcl12P40224 Bak1-202ENSMUST00000078691 2387 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Cxcl12P40224 Nhsl1-201ENSMUST00000037341 7321 ntAPPRIS P3 TSL 5 BASIC10.97□□□□□ -0.65
Cxcl12P40224 C1qtnf1-202ENSMUST00000106286 2512 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Cxcl12P40224 C5ar1-202ENSMUST00000168818 2540 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Cxcl12P40224 C1qtnf1-201ENSMUST00000017590 2532 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Cxcl12P40224 Ap1m2-202ENSMUST00000115433 2586 ntAPPRIS ALT1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Cxcl12P40224 Fam120b-201ENSMUST00000055352 4518 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Cxcl12P40224 Brd3-201ENSMUST00000028282 5419 ntAPPRIS P3 TSL 5 BASIC10.97□□□□□ -0.65
Cxcl12P40224 Glis3-209ENSMUST00000162022 7514 ntAPPRIS P2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 67.6 ms