Protein–RNA interactions for Protein: P0C0A3

Chmp6, Charged multivesicular body protein 6, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp6P0C0A3 Gfra2-203ENSMUST00000227697 1323 ntBASIC11.64□□□□□ -0.55
Chmp6P0C0A3 G3bp1-201ENSMUST00000018727 6703 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Chmp6P0C0A3 Sass6-204ENSMUST00000197335 2458 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Chmp6P0C0A3 Snd1-206ENSMUST00000167201 3781 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Chmp6P0C0A3 Gtf2ird1-206ENSMUST00000111244 3461 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Chmp6P0C0A3 Tmem154-201ENSMUST00000107682 3342 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Chmp6P0C0A3 AC164161.2-201ENSMUST00000217446 1730 ntTSL 5 BASIC11.64□□□□□ -0.55
Chmp6P0C0A3 Acnat1-202ENSMUST00000107697 1446 ntAPPRIS ALT2 TSL 5 BASIC11.64□□□□□ -0.55
Chmp6P0C0A3 Crygc-202ENSMUST00000114064 612 ntAPPRIS ALT1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Chmp6P0C0A3 Ablim2-204ENSMUST00000114204 2953 ntAPPRIS ALT2 TSL 5 BASIC11.64□□□□□ -0.55
Chmp6P0C0A3 Gm6322-201ENSMUST00000118789 1004 ntBASIC11.64□□□□□ -0.55
Chmp6P0C0A3 Thegl-203ENSMUST00000118941 746 ntTSL 3 BASIC11.64□□□□□ -0.55
Chmp6P0C0A3 Gm12628-201ENSMUST00000122193 382 ntBASIC11.64□□□□□ -0.55
Chmp6P0C0A3 Mir1893-201ENSMUST00000122565 83 ntBASIC11.64□□□□□ -0.55
Chmp6P0C0A3 Gm12798-201ENSMUST00000124786 666 ntTSL 5 BASIC11.64□□□□□ -0.55
Chmp6P0C0A3 Cntrobos-201ENSMUST00000132834 383 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Chmp6P0C0A3 Gm16323-201ENSMUST00000134920 556 ntTSL 3 BASIC11.64□□□□□ -0.55
Chmp6P0C0A3 Gm45716-203ENSMUST00000153734 644 ntAPPRIS P1 TSL 5 BASIC11.64□□□□□ -0.55
Chmp6P0C0A3 Gm5529-201ENSMUST00000165691 891 ntBASIC11.64□□□□□ -0.55
Chmp6P0C0A3 Gm20441-201ENSMUST00000173512 756 ntAPPRIS P1 TSL 5 BASIC11.64□□□□□ -0.55
Chmp6P0C0A3 Gm29283-201ENSMUST00000187394 288 ntTSL 5 BASIC11.64□□□□□ -0.55
Chmp6P0C0A3 Gm18059-201ENSMUST00000208073 580 ntBASIC11.64□□□□□ -0.55
Chmp6P0C0A3 Gm45609-204ENSMUST00000209837 1207 ntTSL 5 BASIC11.64□□□□□ -0.55
Chmp6P0C0A3 Gm45338-204ENSMUST00000210658 1105 ntTSL 5 BASIC11.64□□□□□ -0.55
Chmp6P0C0A3 Myl6-203ENSMUST00000217776 562 ntTSL 3 BASIC11.64□□□□□ -0.55
Chmp6P0C0A3 AC167364.1-201ENSMUST00000221495 784 ntTSL 5 BASIC11.64□□□□□ -0.55
Chmp6P0C0A3 Ddx3x-201ENSMUST00000000804 4692 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Chmp6P0C0A3 Tnip1-206ENSMUST00000108889 2834 ntAPPRIS P3 TSL 1 (best) BASIC11.64□□□□□ -0.55
Chmp6P0C0A3 Icam1-201ENSMUST00000086399 2535 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Chmp6P0C0A3 Ccdc78-201ENSMUST00000095500 1651 ntAPPRIS P1 TSL 5 BASIC11.64□□□□□ -0.55
Chmp6P0C0A3 Thsd4-201ENSMUST00000034829 4816 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Chmp6P0C0A3 Alox5-207ENSMUST00000170186 1929 ntTSL 5 BASIC11.64□□□□□ -0.55
Chmp6P0C0A3 Apon-201ENSMUST00000060782 1397 ntAPPRIS P1 TSL 2 BASIC11.64□□□□□ -0.55
Chmp6P0C0A3 Zfp324-201ENSMUST00000038701 4315 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Chmp6P0C0A3 Qtrt2-201ENSMUST00000023387 2838 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Chmp6P0C0A3 Ecsit-203ENSMUST00000179422 1462 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Chmp6P0C0A3 Gm42815-201ENSMUST00000198787 1470 ntBASIC11.63□□□□□ -0.55
Chmp6P0C0A3 Fcamr-202ENSMUST00000112477 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Chmp6P0C0A3 Zc3h12a-201ENSMUST00000036188 2755 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Chmp6P0C0A3 Bsnd-201ENSMUST00000054472 2756 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Chmp6P0C0A3 AC154528.2-201ENSMUST00000228432 3023 ntBASIC11.63□□□□□ -0.55
Chmp6P0C0A3 Gm13694-201ENSMUST00000178533 2493 ntAPPRIS P1 BASIC11.63□□□□□ -0.55
Chmp6P0C0A3 Gm13693-201ENSMUST00000178960 2493 ntAPPRIS P1 BASIC11.63□□□□□ -0.55
Chmp6P0C0A3 Gm13698-202ENSMUST00000179192 2493 ntAPPRIS P1 BASIC11.63□□□□□ -0.55
Chmp6P0C0A3 Gm13696-202ENSMUST00000180347 2493 ntAPPRIS P1 BASIC11.63□□□□□ -0.55
Chmp6P0C0A3 Cnga4-201ENSMUST00000033187 2484 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Chmp6P0C0A3 Gm13691-201ENSMUST00000099947 2493 ntAPPRIS P1 BASIC11.63□□□□□ -0.55
Chmp6P0C0A3 Gm13697-201ENSMUST00000099948 2493 ntAPPRIS P1 BASIC11.63□□□□□ -0.55
Chmp6P0C0A3 Gm13695-201ENSMUST00000099951 2493 ntAPPRIS P1 BASIC11.63□□□□□ -0.55
Chmp6P0C0A3 Gm42499-201ENSMUST00000196193 1412 ntBASIC11.63□□□□□ -0.55
Chmp6P0C0A3 Man2c1-201ENSMUST00000034836 3215 ntAPPRIS ALT2 TSL 5 BASIC11.63□□□□□ -0.55
Chmp6P0C0A3 Ccin-201ENSMUST00000095107 1941 ntAPPRIS P1 BASIC11.63□□□□□ -0.55
Chmp6P0C0A3 Gm42047-202ENSMUST00000212899 4988 ntTSL 2 BASIC11.63□□□□□ -0.55
Chmp6P0C0A3 Gtf2h5-202ENSMUST00000100955 879 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Chmp6P0C0A3 Ifna2-201ENSMUST00000105147 1032 ntAPPRIS P1 BASIC11.63□□□□□ -0.55
Chmp6P0C0A3 Gm13019-201ENSMUST00000120000 276 ntBASIC11.63□□□□□ -0.55
Chmp6P0C0A3 Gm15911-201ENSMUST00000138992 809 ntTSL 3 BASIC11.63□□□□□ -0.55
Chmp6P0C0A3 Coa3-202ENSMUST00000168089 291 ntTSL 3 BASIC11.63□□□□□ -0.55
Chmp6P0C0A3 Mipep-ps-201ENSMUST00000177439 291 ntBASIC11.63□□□□□ -0.55
Chmp6P0C0A3 Gm16740-201ENSMUST00000181819 956 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Chmp6P0C0A3 Mir8091-201ENSMUST00000183602 139 ntBASIC11.63□□□□□ -0.55
Chmp6P0C0A3 4930402C01Rik-201ENSMUST00000192586 663 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Chmp6P0C0A3 Diablo-210ENSMUST00000200247 748 ntTSL 5 BASIC11.63□□□□□ -0.55
Chmp6P0C0A3 Gm42588-201ENSMUST00000200538 1297 ntBASIC11.63□□□□□ -0.55
Chmp6P0C0A3 Gm5298-201ENSMUST00000201122 892 ntBASIC11.63□□□□□ -0.55
Chmp6P0C0A3 Gm7880-201ENSMUST00000203748 871 ntBASIC11.63□□□□□ -0.55
Chmp6P0C0A3 Gm45682-201ENSMUST00000209434 1256 ntTSL 5 BASIC11.63□□□□□ -0.55
Chmp6P0C0A3 Mrps11-201ENSMUST00000032840 1056 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Chmp6P0C0A3 Spata46-201ENSMUST00000056991 771 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Chmp6P0C0A3 Olfr525-201ENSMUST00000078103 1050 ntAPPRIS P1 BASIC11.63□□□□□ -0.55
Chmp6P0C0A3 Krtap4-1-201ENSMUST00000081007 1015 ntAPPRIS P1 BASIC11.63□□□□□ -0.55
Chmp6P0C0A3 Gm25125-201ENSMUST00000083340 136 ntBASIC11.63□□□□□ -0.55
Chmp6P0C0A3 Lce1e-201ENSMUST00000090867 711 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Chmp6P0C0A3 Gm4950-201ENSMUST00000091905 618 ntAPPRIS P1 BASIC11.63□□□□□ -0.55
Chmp6P0C0A3 Prss3-201ENSMUST00000096003 822 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Chmp6P0C0A3 Ctxn2-201ENSMUST00000099452 1028 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Chmp6P0C0A3 Mypn-201ENSMUST00000095580 5246 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Chmp6P0C0A3 Epx-201ENSMUST00000049768 2689 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Chmp6P0C0A3 Exosc10-202ENSMUST00000076022 2682 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Chmp6P0C0A3 Acbd5-212ENSMUST00000227663 4566 ntAPPRIS ALT2 BASIC11.63□□□□□ -0.55
Chmp6P0C0A3 1700017B05Rik-201ENSMUST00000034846 4152 ntAPPRIS P2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Chmp6P0C0A3 Gm28268-201ENSMUST00000188966 2528 ntTSL 5 BASIC11.63□□□□□ -0.55
Chmp6P0C0A3 Trmt44-201ENSMUST00000030980 3790 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Chmp6P0C0A3 Fyco1-202ENSMUST00000167595 7692 ntAPPRIS P1 TSL 5 BASIC11.63□□□□□ -0.55
Chmp6P0C0A3 Tti2-204ENSMUST00000210129 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Chmp6P0C0A3 Brat1-202ENSMUST00000100505 3431 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Chmp6P0C0A3 Oprm1-212ENSMUST00000105603 2053 ntTSL 5 BASIC11.63□□□□□ -0.55
Chmp6P0C0A3 Lpo-201ENSMUST00000103177 2926 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Chmp6P0C0A3 Mtmr7-205ENSMUST00000174205 2679 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Chmp6P0C0A3 Atxn1-201ENSMUST00000091628 10569 ntAPPRIS P3 TSL 1 (best) BASIC11.63□□□□□ -0.55
Chmp6P0C0A3 Gpr37-202ENSMUST00000200812 3035 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Chmp6P0C0A3 Tcn2-206ENSMUST00000109992 1945 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
Chmp6P0C0A3 Olfr1113-202ENSMUST00000215611 1949 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
Chmp6P0C0A3 Gm30228-201ENSMUST00000218501 1949 ntTSL 3 BASIC11.62□□□□□ -0.55
Chmp6P0C0A3 Vwf-203ENSMUST00000112254 8834 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Chmp6P0C0A3 Gm8020-201ENSMUST00000170174 1406 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
Chmp6P0C0A3 Gm45675-201ENSMUST00000211202 3429 ntBASIC11.62□□□□□ -0.55
Chmp6P0C0A3 Trpm2-203ENSMUST00000105401 7274 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Chmp6P0C0A3 Dclk1-213ENSMUST00000199702 2922 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Chmp6P0C0A3 Vmn2r-ps25-201ENSMUST00000202322 2321 ntBASIC11.62□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 40 ms