Protein–RNA interactions for Protein: J3QNE4

Ccdc180, Coiled-coil domain-containing 180, mousemouse

Predictions only

Length 1,664 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc180J3QNE4 Nr1h4-201ENSMUST00000058126 1964 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ccdc180J3QNE4 Tbc1d2-201ENSMUST00000084621 4315 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ccdc180J3QNE4 Oxsm-201ENSMUST00000022311 3759 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ccdc180J3QNE4 Gm15604-201ENSMUST00000118350 1456 ntBASIC19.21■□□□□ 0.67
Ccdc180J3QNE4 Itgal-201ENSMUST00000106306 5195 ntAPPRIS P4 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ccdc180J3QNE4 H2-T3-204ENSMUST00000102675 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ccdc180J3QNE4 C030014I23Rik-204ENSMUST00000217463 1370 ntTSL 5 BASIC19.21■□□□□ 0.67
Ccdc180J3QNE4 Gm14538-201ENSMUST00000122019 1327 ntBASIC19.21■□□□□ 0.67
Ccdc180J3QNE4 Fhl1-206ENSMUST00000116596 1203 ntTSL 5 BASIC19.2■□□□□ 0.66
Ccdc180J3QNE4 Gm32111-201ENSMUST00000207689 846 ntBASIC19.2■□□□□ 0.66
Ccdc180J3QNE4 Gm44700-201ENSMUST00000208228 846 ntTSL 3 BASIC19.2■□□□□ 0.66
Ccdc180J3QNE4 2010111I01Rik-201ENSMUST00000021911 2979 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
Ccdc180J3QNE4 AC154431.1-201ENSMUST00000224910 880 ntBASIC19.2■□□□□ 0.66
Ccdc180J3QNE4 Samd4b-201ENSMUST00000040531 4349 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Ccdc180J3QNE4 Mknk1-202ENSMUST00000106513 2552 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ccdc180J3QNE4 Slc38a3-209ENSMUST00000193932 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ccdc180J3QNE4 Cfap74-204ENSMUST00000123952 2365 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ccdc180J3QNE4 Synpo2l-202ENSMUST00000117386 3979 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ccdc180J3QNE4 Gm10699-201ENSMUST00000098916 2130 ntBASIC19.2■□□□□ 0.66
Ccdc180J3QNE4 Ncf1-202ENSMUST00000111275 2721 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ccdc180J3QNE4 Arhgap24-203ENSMUST00000094559 3346 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ccdc180J3QNE4 AC129336.2-201ENSMUST00000218053 3086 ntBASIC19.2■□□□□ 0.66
Ccdc180J3QNE4 Chmp1b-202ENSMUST00000210564 2490 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
Ccdc180J3QNE4 Srrt-201ENSMUST00000040873 3024 ntAPPRIS P3 TSL 5 BASIC19.2■□□□□ 0.66
Ccdc180J3QNE4 Grin1-205ENSMUST00000114312 3838 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Ccdc180J3QNE4 Grin1-207ENSMUST00000114317 3809 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ccdc180J3QNE4 Gm13197-201ENSMUST00000117204 225 ntBASIC19.2■□□□□ 0.66
Ccdc180J3QNE4 Gm16574-201ENSMUST00000159301 745 ntBASIC19.2■□□□□ 0.66
Ccdc180J3QNE4 Gm26611-201ENSMUST00000181449 785 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Ccdc180J3QNE4 Gm26913-201ENSMUST00000182391 732 ntBASIC19.2■□□□□ 0.66
Ccdc180J3QNE4 Gm9273-201ENSMUST00000200606 715 ntBASIC19.2■□□□□ 0.66
Ccdc180J3QNE4 Gm29803-201ENSMUST00000205069 375 ntBASIC19.2■□□□□ 0.66
Ccdc180J3QNE4 Gm7319-201ENSMUST00000210047 778 ntBASIC19.2■□□□□ 0.66
Ccdc180J3QNE4 4933407I05Rik-202ENSMUST00000213467 420 ntTSL 2 BASIC19.2■□□□□ 0.66
Ccdc180J3QNE4 AC156274.1-201ENSMUST00000219193 634 ntBASIC19.2■□□□□ 0.66
Ccdc180J3QNE4 AC159006.3-201ENSMUST00000226918 664 ntBASIC19.2■□□□□ 0.66
Ccdc180J3QNE4 Gm10053-201ENSMUST00000073080 949 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
Ccdc180J3QNE4 Vmn1r212-201ENSMUST00000095960 1164 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
Ccdc180J3QNE4 Isl1-201ENSMUST00000036060 2516 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ccdc180J3QNE4 Map4-206ENSMUST00000169851 3446 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Ccdc180J3QNE4 Smc4-201ENSMUST00000042901 4316 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ccdc180J3QNE4 Lrrc23-202ENSMUST00000112475 1444 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ccdc180J3QNE4 Gabrr2-201ENSMUST00000024035 1820 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Ccdc180J3QNE4 Pcdha2-202ENSMUST00000195590 4645 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ccdc180J3QNE4 Nr3c1-201ENSMUST00000025300 4989 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ccdc180J3QNE4 Acvrl1-201ENSMUST00000000542 3640 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ccdc180J3QNE4 Toe1-201ENSMUST00000030451 2090 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ccdc180J3QNE4 Ighv14-3-201ENSMUST00000103469 399 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
Ccdc180J3QNE4 Gm23916-201ENSMUST00000158484 399 ntBASIC19.19■□□□□ 0.66
Ccdc180J3QNE4 Gm44716-201ENSMUST00000209007 710 ntBASIC19.19■□□□□ 0.66
Ccdc180J3QNE4 AC140409.3-201ENSMUST00000215601 358 ntTSL 3 BASIC19.19■□□□□ 0.66
Ccdc180J3QNE4 Smpd4-219ENSMUST00000170366 2256 ntTSL 5 BASIC19.19■□□□□ 0.66
Ccdc180J3QNE4 Gm5833-202ENSMUST00000190707 1932 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Ccdc180J3QNE4 Sp2-202ENSMUST00000107623 2907 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ccdc180J3QNE4 Plrg1-204ENSMUST00000150268 1851 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ccdc180J3QNE4 Katnal2-211ENSMUST00000154665 1515 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Ccdc180J3QNE4 Fam71e2-202ENSMUST00000174409 2716 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Ccdc180J3QNE4 E2f8-201ENSMUST00000058745 3691 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ccdc180J3QNE4 Gm7790-201ENSMUST00000118716 1310 ntBASIC19.18■□□□□ 0.66
Ccdc180J3QNE4 Tpr-201ENSMUST00000119161 7480 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
Ccdc180J3QNE4 Rasgrp4-211ENSMUST00000203380 3077 ntTSL 5 BASIC19.18■□□□□ 0.66
Ccdc180J3QNE4 Gm8464-202ENSMUST00000146697 1142 ntBASIC19.18■□□□□ 0.66
Ccdc180J3QNE4 Gm4750-201ENSMUST00000151942 1142 ntBASIC19.18■□□□□ 0.66
Ccdc180J3QNE4 Gm9117-201ENSMUST00000177735 1098 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
Ccdc180J3QNE4 Gm6967-201ENSMUST00000182599 1007 ntBASIC19.18■□□□□ 0.66
Ccdc180J3QNE4 Tdrkh-203ENSMUST00000196386 1050 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Ccdc180J3QNE4 Ift22-204ENSMUST00000200153 670 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Ccdc180J3QNE4 Gm43761-201ENSMUST00000202132 991 ntBASIC19.18■□□□□ 0.66
Ccdc180J3QNE4 Gm39147-202ENSMUST00000211730 882 ntTSL 5 BASIC19.18■□□□□ 0.66
Ccdc180J3QNE4 Tsga8-201ENSMUST00000049420 1070 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ccdc180J3QNE4 Ift43-201ENSMUST00000054565 773 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ccdc180J3QNE4 Serpina3g-201ENSMUST00000043315 1803 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ccdc180J3QNE4 Tmprss6-201ENSMUST00000017086 3191 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ccdc180J3QNE4 Acot9-201ENSMUST00000026324 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ccdc180J3QNE4 Dpysl5-201ENSMUST00000088081 5022 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ccdc180J3QNE4 Zfp783-204ENSMUST00000130490 4419 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Ccdc180J3QNE4 Extl3-203ENSMUST00000225633 6013 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
Ccdc180J3QNE4 Gm31763-202ENSMUST00000218205 1724 ntBASIC19.18■□□□□ 0.66
Ccdc180J3QNE4 Rangap1-202ENSMUST00000170134 3002 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ccdc180J3QNE4 Gm9466-201ENSMUST00000218144 2246 ntBASIC19.18■□□□□ 0.66
Ccdc180J3QNE4 Tmem200a-203ENSMUST00000218232 3510 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ccdc180J3QNE4 Tctn3-201ENSMUST00000025981 2743 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ccdc180J3QNE4 Tstd2-202ENSMUST00000107772 3726 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ccdc180J3QNE4 Arhgef2-203ENSMUST00000170653 4238 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ccdc180J3QNE4 Tnc-202ENSMUST00000107371 2928 ntTSL 5 BASIC19.18■□□□□ 0.66
Ccdc180J3QNE4 Abi1-209ENSMUST00000140164 3403 ntAPPRIS ALT1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ccdc180J3QNE4 Polr3c-201ENSMUST00000029741 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ccdc180J3QNE4 U2af1l4-237ENSMUST00000167042 3007 ntAPPRIS P5 TSL 2 BASIC19.18■□□□□ 0.66
Ccdc180J3QNE4 Mrps33-202ENSMUST00000114797 500 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Ccdc180J3QNE4 Nsa2-ps2-201ENSMUST00000120785 773 ntBASIC19.17■□□□□ 0.66
Ccdc180J3QNE4 Gm3898-201ENSMUST00000180221 613 ntTSL 5 BASIC19.17■□□□□ 0.66
Ccdc180J3QNE4 Gm37390-201ENSMUST00000192452 872 ntBASIC19.17■□□□□ 0.66
Ccdc180J3QNE4 Ube2k-210ENSMUST00000202679 4682 ntTSL 5 BASIC19.17■□□□□ 0.66
Ccdc180J3QNE4 Bcl2-202ENSMUST00000189999 2841 ntBASIC19.17■□□□□ 0.66
Ccdc180J3QNE4 Reln-201ENSMUST00000062372 10885 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
Ccdc180J3QNE4 Gsg1-204ENSMUST00000111911 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ccdc180J3QNE4 Gm45110-201ENSMUST00000205704 1402 ntBASIC19.17■□□□□ 0.66
Ccdc180J3QNE4 9530082P21Rik-203ENSMUST00000181605 3162 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Ccdc180J3QNE4 Fam13c-203ENSMUST00000173042 3310 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ccdc180J3QNE4 Ablim2-206ENSMUST00000114206 3528 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 65.9 ms